BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg335745

Length=429
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G26550.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans i...   721    0.0  


> AT1G26550.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans 
isomerase family protein | chr1:9171130-9172940 FORWARD LENGTH=737
Length=737

 Score =  721 bits (390),  Expect = 0.0
 Identities = 416/429 (97%), Gaps = 0/429 (0%)
 Strand=Plus/Plus

Query  1    ATGGGGAAGGACGCAAAAGCTGGTGGGAAGGGTAAAGGAAAGCAAGCTAGTGGTAGTGAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct  85   ATGGGGAAGGACGCAAAAGCTGGTGGGAAGGGTAAAGGAAAGCAAGCAAGTGGTAGTGAA  144

Query  61   GAAGCACCCTCCAAGGGTAAAGGCAAAGCAGGAAAAGCCGCTGATGGTCTCGGGACATGC  120
            ||||| ||||||||||||||||| |||||||||||||| || |||||||| |||||||||
Sbjct  145  GAAGCTCCCTCCAAGGGTAAAGGAAAAGCAGGAAAAGCTGCAGATGGTCTTGGGACATGC  204

Query  121  ACTTATGTTAAAGCAAGACACGTTTTGTGCGAGAAGCAAGGAAAGATCAACGAGGCCTAC  180
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  205  ACTTATGTTAAAGCAAGACATGTTTTGTGCGAGAAGCAAGGAAAGATCAACGAGGCCTAC  264

Query  181  AAAAAGTTGCAGGATGGTTGGTTGAGCAACGGAGACAAGGTTCCTCCTGCTGAGTTTGCA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  265  AAAAAGTTGCAGGATGGTTGGTTGAGCAACGGAGACAAGGTTCCTCCTGCTGAGTTTGCA  324

Query  241  AAGATTGCAGCAGAGTACTCGGAGTGCCCATCAGGGAAAAAAGGAGGAGATCTTGGATGG  300
            |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct  325  AAGATTGCAGCAGAGTACTCTGAGTGTCCATCAGGGAAAAAAGGAGGAGATCTTGGATGG  384

Query  301  TTCCCTCGTGGAAAGATGGCAGGTCCATTCCAAGATGTCGCCTTTAACACACCTGTTGGA  360
            |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  385  TTCCCTCGAGGAAAGATGGCAGGTCCATTCCAAGATGTCGCCTTTAATACACCTGTTGGA  444

Query  361  GTCACCAGTGCACCCTTCAAATCAACGCACGGATACCACATTATCTTATCAGAGGGAAGG  420
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  445  GTCACCAGTGCACCCTTCAAATCAACGCACGGATACCACATTATTTTATCAGAGGGAAGG  504

Query  421  AAGAACTGA  429
            |||||||||
Sbjct  505  AAGAACTGA  513



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 20358438345


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5