BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg336756
Length=7491
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72270.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Ribosome ... 4819 0.0
AT4G27010.2 | Symbols: | INVOLVED IN: biological_process unkno... 4532 0.0
AT1G62740.1 | Symbols: Hop2 | stress-inducible protein, putativ... 150 2e-34
> AT1G72270.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Ribosome
60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT4G27010.1);
Has 772 Blast hits to 657 proteins in 120 species:
Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants
- 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
| chr1:27199733-27211161 REVERSE LENGTH=8577
Length=8577
Score = 4819 bits (2609), Expect = 0.0
Identities = 4104/4796 (86%), Gaps = 222/4796 (5%)
Strand=Plus/Plus
Query 2279 TTACGACTGTTGGAAATAATTTATTCAAGCAATGGGAAATTGTCAGAAG-TAGATTGTCC 2337
||||| |||||||||||| ||||||| ||||||| | |||||||||||| | ||||||
Sbjct 3122 TTACGGCTGTTGGAAATACTTTATTCCAGCAATGTGCAATTGTCAGAAGCT-CCTTGTCC 3180
Query 2338 CATTTAAAAGGTG-ACTCAATTGGTTTTAGCCCCTTAATTGTTTGTATTCTGGAGAACTG 2396
||||||||||||| | |||||||||||||||||| ||||||||||||||||| |||| ||
Sbjct 3181 CATTTAAAAGGTGTA-TCAATTGGTTTTAGCCCCCTAATTGTTTGTATTCTGCAGAAGTG 3239
Query 2397 TGTTAGGCTGCTTAAGTCTGAATCTAAAAAATATTCTTTACCAGACAAGTCAGCAATATC 2456
||| | ||| || || ||||||||| || ||||||||||||| ||||||||||| ||||
Sbjct 3240 TGTGAAGCTACTAAATTCTGAATCTCAAGCATATTCTTTACCAAACAAGTCAGCAGTATC 3299
Query 2457 TCTGTACGTCTGCAGCACATTGAAATATCTTTTGCAAACTCAGGTAGATTCCAGTGGACT 2516
||||||||||| |||| ||||||||||| |||||||||||||||||||| |||| |||
Sbjct 3300 TCTGTACGTCTACAGCTCATTGAAATATATTTTGCAAACTCAGGTAGATCCCAGACCACT 3359
Query 2517 CTCATGTTTGGTCCAGTCAGTTTTGTCTGAGGTGGTTGATGGATCTAAGGATTCTTTATG 2576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3360 CTCATGTTTGGTCCAGTCAGTTTTGTCTGAGGTGGTTGATGGATCTAAGGATTCTTTATG 3419
Query 2577 TGAATGGAGGCCATTGAG-GATGTTGCTGCTTTTCT-CACAATCTTTGTCAGACaaaaaa 2634
||||||| ||||||||| | ||||||||||||| | |||||||||||||||| |
Sbjct 3420 TGAATGGTTGCCATTGAGAG-TGTTGCTGCTTTT-TACACAATCTTTGTCAGA-AC---- 3472
Query 2635 aCTTTCATCTTACATTCCAGAAGGACAACGA-GTTTACTTGCTGACACTTCTTTTGCAGA 2693
|||||||||| |||||| |||||||||| | || ||||||||||||||||||||| |
Sbjct 3473 -CTTTCATCTTGCATTCCGGAAGGACAAC-ATGTCGACTTGCTGACACTTCTTTTGCTGC 3530
Query 2694 TTCTCTTGATGAGATAAAAGGACTGGTGAGAAGAAGTATTTCTCTGGATGAAATCGCAGG 2753
||||||||||||||||||||||| ||||||| |||| ||| ||||||| | | |||
Sbjct 3531 CACTCTTGATGAGATAAAAGGACTGATGAGAAG---TATTACTCCGGATGAAGTTGGAGG 3587
Query 2754 AATCGTTAAAGCGTTTTCTTCTGCATTGATATGTGCAACACCTGAATCAATTTTGGAGAA 2813
| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 3588 AGTCGTTAATGCGTTTTCTTCTGCATTGATATGTGCAACGCCTGAATCAATTTTGAAGAA 3647
Query 2814 TTTTGCTTCTGTGATGGCTA-TTTCTTGGGATTTATATGGAACATCATTCTCATTTTTAC 2872
|||||||||||||||||| | ||||||||||| | || ||||||||||||||||||||||
Sbjct 3648 TTTTGCTTCTGTGATGGC-AGTTTCTTGGGATCTCTACGGAACATCATTCTCATTTTTAC 3706
Query 2873 AGTCCATCGTCTTTCTAGAGGAAAACTTCCTCGGAAACCTTTCAAAGCTATCACCTGACT 2932
||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3707 TGTCCATCATCTTTTTAGAGAAAAACTTCCTCGGAAACCTTTCAAAGCTATCACCTGACT 3766
Query 2933 TATTTGTGAGAGGTTTAGAACTTACTAG-GTCAAGGAATCTCCGTGAAGGAATAGTAGAT 2991
||||| || |||| || ||||||||| | ||||||||||||||||||||||| |||||||
Sbjct 3767 TATTTATGCGAGGGTTGGAACTTACT-GTGTCAAGGAATCTCCGTGAAGGAACAGTAGAT 3825
Query 2992 AGTGAGATTGATTTTGCTGACTACTCATCCGTAACTGAAGCAATCAAAAGTAAGATGGAG 3051
||||||||||||||||||||| |||||||| ||||||| |||||| |||||||||||
Sbjct 3826 AGTGAGATTGATTTTGCTGACCACTCATCCACAACTGAAAAAATCAAGAGTAAGATGGAC 3885
Query 3052 ATTCGTGATATTTATTCTTCT-GCCTTGTCTATGTTCTTCGAGCAGGCTCCTTTTCCAGT 3110
|||| ||||||| | ||| || || || ||| | ||||| |||||| |||||||||||||
Sbjct 3886 ATTCCTGATATTGAATCT-CTTGCATTCTCTGTATTCTTAGAGCAGACTCCTTTTCCAGT 3944
Query 3111 ATTACTTAACGAAATTATGAGCATGGATATATCTTGCGTGCCAGAGTTTCCAAGATTAGC 3170
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||| |
Sbjct 3945 ATTACTTAATGAAATTATGAGCATGGATATATCTTGCTTACCAGAGTTTCCAAGATTAAC 4004
Query 3171 AGAGCTACTGCTGC--AA-GTTTGGCAACCTAAAAGTGATAGTATTGAATCAGATATCCG 3227
||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||
Sbjct 4005 AGAGCTACTACTGCTTAAAGTTTCGCAACCTAAAAGTGATAGTATTGAATCAGATATCCG 4064
Query 3228 ATTAATACTATTCTGGCTCTTCCAAATACGATCATCT-TACAAGATTCAACCAGCTTC-G 3285
||||||||||||||||||||||||||||||||||| | |||||| |||||||| | | |
Sbjct 4065 ATTAATACTATTCTGGCTCTTCCAAATACGATCAT-TGTACAAGGTTCAACCA-CACCCG 4122
Query 3286 GTACTCTGTCGACTCTCTGAGATCTGCTTACGTCTCTTGAAGCACTTGTTCTCGCAAATA 3345
|||||||||| || |||||||||||||||||||| ||| |||||||||||| ||||||
Sbjct 4123 GTACTCTGTCAACAATCTGAGATCTGCTTACGTCTAATGAGGCACTTGTTCTCTCAAATA 4182
Query 3346 TCAGAA-CGGGGCTTTGTTTCTGGACCTTCTTCAGATAAGTTGGTTGCTCCTTTTGCAAA 3404
||| || | | | ||||||||||||||||| ||||||||||| ||
Sbjct 4183 TCA-AAGCTTGACCTTGTTTCTGGACCTTCTGCAGATAAGTTG--------------AA- 4226
Query 3405 GTGGAAGCATCAAGTGGCCCAGACAGTTCTTTGCCATCCAGTTGTGATGGCACTGTTGGA 3464
| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 4227 G------CATCAAGTGCCCCAGACAGTTCTTTCCCACCCAGTTGTGATGGCACTGTTGGA 4280
Query 3465 GAGTCCCT-TGGATTGTGGCACATTACCTCCAGTGCATAATGTTAAGATTTTTTCAGAAA 3523
||||||| || |||||| ||||||||||| |||||| |||||| || ||||||||||||
Sbjct 4281 GAGTCCCGCTG-ATTGTGACACATTACCTCGAGTGCAGAATGTTGAGGTTTTTTCAGAAA 4339
Query 3524 CGTCGCTGAC-GACGAGCAGGCTAGTTATTTGTGAAATAGATCAACACATCCTTGATCTA 3582
||| |||||| | || ||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 4340 CGTTGCTGACAG-CGGGCAGGCTAGGTATTAGTGAAATAGATCAACACATCCTTGATCTC 4398
Query 3583 TTGGTTTCTATTTGTGAGCACTTTTTGTTTGATGAGAGACACATTGTGCAGGAA-GGAGA 3641
|||| ||||| ||||||| ||||||||||||| ||||| || |||| || |||| || ||
Sbjct 4399 TTGGCTTCTACTTGTGAGAACTTTTTGTTTGAGGAGAGTCATATTGAGC-GGAAAGGGGA 4457
Query 3642 TCTCAGGGAAAATAAGTCAAGTACGGTTTTTAAGGACTTGGT-GCAAAGGCTTCTTTTGT 3700
||||||| | ||||||||| || || |||||||| |||||| | |||||||||| |||
Sbjct 4458 CCTCAGGGCAGATAAGTCAATTATGGCTTTTAAGGTCTTGGTTG-AAAGGCTTCTCTTGG 4516
Query 3701 TATTCAGAGACAAGTTTGAGCTTTGTGTTGGTTCTCAAAGTTACGCTCCGCTTCTCCAAC 3760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4517 TATTCAGAGACAAGTTTGAGCTTTGTGTTGGTTCTCAAAGTTACGCTCCGCTTCTCCAAC 4576
Query 3761 CATC-ACAATTAATTCATGCGTTGTTGAGATTTATTTCACCTTTCAAAATTTTAGAGCTA 3819
||| |||||||||||| || ||||||| |||||| |||||||| ||| ||||| | ||
Sbjct 4577 -ATCCACAATTAATTCAGGCTTTGTTGAAATTTATATCACCTTTTAAACTTTTATATCTT 4635
Query 3820 GCCCGTTCCATGCTGAGTAAAA-TTGATGAGGAAGAATTGGCTAGCCCAAATTCGAGTAT 3878
|| | ||||||||||||||||| || | |||||||||||||| ||||| | ||| |
Sbjct 4636 GCACATTCCATGCTGAGTAAAACTT-ACGAGGAAGAATTGGCGAGCCCGA-TTCTC--A- 4690
Query 3879 GATTATCAGTTTGGGATTGGATATTGCTGGCGGAGCTTTTGAAATGCTTATATCT-TATT 3937
| || || | || ||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 4691 G-TT-TC-G---GG--TTGGATATTGCTGGCGGAGCTTTTGAAATGCTTATAT-TGTATT 4741
Query 3938 CACACCTGCCGGCTGCTAAGAGA-GGGTTATATGATTTGCTGTGGGAATTAAAAGA-AGA 3995
||| || ||| |||||||||||| |||| |||||||| |||||||||||| |||| | |
Sbjct 4742 CACGCCAGCCTGCTGCTAAGAGAAGGGTC-TATGATTTTCTGTGGGAATTAGAAGACA-A 4799
Query 3996 GAATTATGACAGTATACTCATTGAGGAAGTCTATAGCATGGCATGCAGGTTTTCTACCTC 4055
|||||||||||||| | | |||||| |||| |||||| ||||||||||||||||||||||
Sbjct 4800 GAATTATGACAGTAGAATTATTGAGCAAGTGTATAGCCTGGCATGCAGGTTTTCTACCTC 4859
Query 4056 TTTTGGTTTGGTTTCGGCAGATACTTGTTTGCTTAAAGTTGGGAGCAGCATTTTCAGGGG 4115
||||||||||| ||||||||||||||||||||||||||| | || |||||||||||||
Sbjct 4860 TTTTGGTTTGGCTTCGGCAGATACTTGTTTGCTTAAAGTCGTTAGTGGCATTTTCAGGGG 4919
Query 4116 GA-AACATAATCGGCATTGCAATGTTCATCCA-TTGACCGTGATAATTTCACAGATTGTT 4173
| || ||| || |||||| | |||||| ||| ||||| |||||||| ||||||||||||
Sbjct 4920 GGGAA-ATAGTCAGCATTGTAGTGTTCA-CCAGTTGACGGTGATAATGTCACAGATTGTT 4977
Query 4174 GGGAGAACTCCTAAAGAC-TTGATTATCCATTATATTAACCAGCCAAGCATGACCAGAGC 4232
||||||||| |||||||| || |||||||||| ||||||||| ||||||||| ||| ||
Sbjct 4978 GGGAGAACTTCTAAAGACCTT-ATTATCCATTGCATTAACCAGGCAAGCATGAGCAGGGC 5036
Query 4233 CAAGATATTGTTCTATCTTGTGGAGTCCAGTCCCTTGCATCTGTCAGTCTTTGGACAC-T 4291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 5037 CAAGATATTGTTCTATCTTGTGGAGTCCAGTCCCTTGCATCTGTCAGTCTTTGGACACAT 5096
Query 4292 CTTTCTTTAGTATGCTAAGTAAGCAACAGG---A-T--G-GCT-----C---TGATCAGT 4336
||||||||||||||||||||| | ||||| | | | ||| | ||||||||
Sbjct 5097 -TTTCTTTAGTATGCTAAGTAAACTACAGGGTGACTCTGCGCTTATTACAGATGATCAGT 5155
Query 4337 TTATCATGCTTCCGCCTGCC-GTGCTATCGTATC-TGGCATCAGTTTATGCAAAAATCGA 4394
|| ||||||||| |||| || ||||||| || || |||||||||||| ||||||| ||||
Sbjct 5156 TTGTCATGCTTCTGCCT-CCTGTGCTATTGT-TCCTGGCATCAGTTTTTGCAAAACTCGA 5213
Query 4395 GACGCCGTGTAGTAGATGTTTAGATATAACTTCACTTTATTCAAATAAACTAACAAACGG 4454
|| | | ||||||| |||||| ||||||||||||||||||||||||| ||||| ||| ||
Sbjct 5214 GAAGTCATGTAGTAAATGTTTGGATATAACTTCACTTTATTCAAATATACTAATAAAAGG 5273
Query 4455 TTTTCATCAGTGGCCCA-GTTTTTTGTCTGGGTGGATCTTTGAAGAGAAGTATGAAGAGA 4513
||||| ||||||||||| ||||| | ||||| || |||||||||||||||||||||||||
Sbjct 5274 TTTTCTTCAGTGGCCCAAGTTTTGT-TCTGGCTGCATCTTTGAAGAGAAGTATGAAGAGA 5332
Query 4514 TTCTTATGTCGACAACTGAGGATATTGACACTATGTTTAATGCGAGTCTTCTTGGGATGG 4573
||||| ||||||| | ||||||||| || |||||||||||||||||||||||||||| ||
Sbjct 5333 TTCTTCTGTCGACGAGTGAGGATATCGAAACTATGTTTAATGCGAGTCTTCTTGGGAAGG 5392
Query 4574 CAGTACGTATGTTTCAGTGTCACTTTGCCTTGAATGAAAGTCCAACTAAAATAGACGATC 4633
|||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 5393 CAGTACGTATGTTTCAGTATCACTTTGCCTTGACTGAAAGTCCAACTAAAACAGACGATC 5452
Query 4634 TCTTAAAGGTATTCTATTCCATGTTTCCCCACGCTAGTGCTGGCAAAGAGATGTTTGATT 4693
|||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||
Sbjct 5453 TCTTGAAGGTATTCTATTCCATGTTTCCTCACACTAGTGCTGGCAAAGAGATGTTGGATT 5512
Query 4694 ACGAGATAAAAGAAATGGACGCTCAGTCAGTACACTATATGTTTAATGTTGCTATCCGTG 4753
|||||||||||||| |||||| | |||||||| || | ||||||||| || ||| ||||
Sbjct 5513 ACGAGATAAAAGAAGTGGACGTTAAGTCAGTAGACCAAATGTTTAATATTACTAACCGTT 5572
Query 4754 TAGTTGCAAAAGTAGAATTTTCAAGGATCTGTTTGTTTCCTGAGGATAGCAGTATATGTC 4813
|||||||||||||||| |||||||||||||||||||||| ||||||||| |||| ||
Sbjct 5573 TAGTTGCAAAAGTAGAGCTTTCAAGGATCTGTTTGTTTCCCGAGGATAGCTGTATGCATC 5632
Query 4814 ATTTTAAAA-GTCAAGCTGTTAGTTGTGC-AAGGGAAAGTTTTCCAGAAATGGGATCCTG 4871
|||| |||| ||||||| | | |||||| |||| |||||| ||||||||||||||||
Sbjct 5633 ATTT-AAAACGTCAAGCAGGTGGTTGTGTGAAGG-AAAGTTCTCCAGAAATGGGATCCAA 5690
Query 4872 CAGAGAGAGTTTA-----C---T-A--AA-TGCTTTAGTTGAA-AGTTGGCCATGTGTTG 4918
||||||||||||| | | | || |||||| ||| || | ||||| ||| ||||
Sbjct 5691 CAGAGAGAGTTTATTAAACCCGTTACTAAATGCTTTCGTT-AATACTTGGCAATGCGTTG 5749
Query 4919 TCAAGAGATCTGATGGTTATTTTAAAGGGAATTCTGAAAGAAA--A-CAAGACAAATGTT 4975
|| |||||||||||||||||| |||||||||||| ||||| | | |||||||||| ||
Sbjct 5750 TCGAGAGATCTGATGGTTATTATAAAGGGAATTCCGAAAGGGAGGAGCAAGACAAATATT 5809
Query 4976 GGTTCCTGTGCAAAAGCCTTGAAAACTTCATTTTGAGAAGTATTCGAAAGATTTTGAAAT 5035
||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||
Sbjct 5810 GGTTCCTGTGCAAAAGCCTTGAATACTTCATTTTGAGAAGTATTCTAAAGTTTTTGGAAG 5869
Query 5036 ACATGTGTGAGGAGCTTATTAACTTGGATTCTCTTCCTTTCTTGGAGAAACTAATGAAAT 5095
|||||||||||||||| | |||||||||| ||||||||| |||||| || ||||| |
Sbjct 5870 GCATGTGTGAGGAGCTTGCTCACTTGGATTCCCTTCCTTTCCTGGAGAGGCTGATGAACT 5929
Query 5096 CAGTTCTCCTGTATAGATTTGAGGACTCAAAGACATTGAAGATACTGAGGGACATTTTCT 5155
| |||| | |||||||||| ||||||| ||||||||||||||||||||||| |||||||
Sbjct 5930 TAATTCTTCGGTATAGATTTAAGGACTCGAAGACATTGAAGATACTGAGGGAAATTTTCT 5989
Query 5156 CCTTATTGTCGAGAGGAAAGTACTCATGTACACTATATATCCAAC-TCCTGGTATCTCAC 5214
|||| ||||| |||||||||||||| ||| | || | ||||| | | ||||| |||
Sbjct 5990 CCTTCTTGTCTAGAGGAAAGTACTC--GTAT-C-AT-T-TCCAAGATT-TAGTATCGCAC 6042
Query 5215 TCTCAGTTTACACC-A--ACCA-T-C-CT----AT--CAGCCTCGCATACTGGTGAATT- 5261
|||||||||||| | | || | | || || || |||| |||||||||||| |
Sbjct 6043 TCTCAGTTTACAGAGAGTATCAGTTCTCTTTCCATTTCATCCTCACATACTGGTGAAGTC 6102
Query 5262 ATTGAGGCCTGTCTCCAGCATTCTAAAACATCTTAGCATCCCAAGTCCAAATTCTGTTGG 5321
|| ||||||||||||||||||||||||| ||||| |||||||| || |||||| || |
Sbjct 6103 ATC-AGGCCTGTCTCCAGCATTCTAAAACTTCTTATCATCCCAAATCTAAATTCCGTCAG 6161
Query 5322 AGTTGGAAGTTGTTGTCTCGAAGCACCCGACTATG-T--GAAG-CAGTTAGAAATTGTCA 5377
||||| || |||| ||||||||||||| || ||| | || | ||| |||||||| |||
Sbjct 6162 AGTTGAAAATTGTAGTCTCGAAGCACCTGAGTATTATTTGA-GTCAGATAGAAATTCTCA 6220
Query 5378 AAATTCTCAGAGTGCTGCTTTCCAAATGTGGAAAAGGTTCGGGGATCAATCTGAAAGAGC 5437
|||||||| |||||||||| | |||||||||||||| ||| || ||| | |||||||
Sbjct 6221 AAATTCTCGGAGTGCTGCTCTGCAAATGTGGAAAAGATTCAGGAATCTTTTTGAAAGATT 6280
Query 5438 TGCGCTTTCtttttttGTGTTCTTATGGTGCAACTATGAGCGAAATTGACTT--AGAGCT 5495
||| ||||| | ||||||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct 6281 TGCACTTTCGTCTTTTGTGTTCTTATGGTGCAACTCCGAGCGAAATCGACTTGCAGAGCT 6340
Query 5496 CTACAAGTTGATGCATGATATCGAGTTGATTGA-GGACGAACAGAGGCTGAATGTTTCTG 5554
||||| |||||||||||||| ||||||||| || |||||| | |||||||| |||||
Sbjct 6341 --ACAAGCTGATGCATGATATCAAGTTGATTGTTGG-CGAACACACGCTGAATGATTCTG 6397
Query 5555 AAACAGATTATTTGTGGGGTAAAGCTGCCTTGAAAATAAGAGAGGGACTGCGTTTTTCTC 5614
|| ||||||||||||||||| || ||||||||||||||||||||||||| || | |
Sbjct 6398 AA---GATTATTTGTGGGGTAATGCAGCCTTGAAAATAAGAGAGGGACTGCCTT---C-C 6450
Query 5615 AGGATGCATA-TTATGGTGGTGAAGCTGGTTTGGTGGAAAATCTCCAG-CAGATTCTTTT 5672
| | | || |||| | ||| | | | ||||| ||||| || |||| ||||||
Sbjct 6451 -G-ACGG-TAGTTAT--TC-TGA---TA-TA-G-TGGAAGATCTC-AGGCAGAGTCTTTT 6497
Query 5673 CAAAGAGAATCTTTGGATTGATCCCAAAATATGTGCTCAAACTCTTTTGTATTTTCCCTA 5732
||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct 6498 CAAAGAGAATCTTTGTCTTGATCCCAAAAGATGTGCTCAAACTGTTTTGTATTTTCCTTA 6557
Query 5733 TCAACGAACTGCAGAGGTATCGGATAACTCTTACATATCTGATGATCCAGTAAGCGAGAA 5792
| ||||||||||||| ||| |||||| ||||||||| |||||||||| ||||||||||
Sbjct 6558 TGGGCGAACTGCAGAGGCATCAGATAACACTTACATATATGATGATCCAATAAGCGAGAA 6617
Query 5793 ATGCTCACCTGTTATTGAACGGTATGATCCGGCTTACATCCTGCCATTCTCAATACACTC 5852
||||||||||| ||||||||| |||||||| | || |||||||| | ||||| |||| |
Sbjct 6618 ATGCTCACCTGCTATTGAACGATATGATCCTGTTTTCATCCTGCGAGTCTCAGTACAATT 6677
Query 5853 ATTGTCCATGGGATGTATTGAACCTGTAAAATTCGCCAGTTCAGGCTTGCTTGCAGTTGC 5912
||||||||||| || ||||||||||| | |||||||||| ||||||||||||||| ||
Sbjct 6678 ATTGTCCATGGTATACATTGAACCTGTGGAGTTCGCCAGTTTAGGCTTGCTTGCAGTGGC 6737
Query 5913 GTTAGCGAGCACGTCTTCAGCAGATCTTGGGATGAGAAAATTGGGCTATGAAACTCTTGG 5972
|| ||||| | ||||||||||||||||||||| |||||| ||||||| |||||||| ||
Sbjct 6738 ATTTGCGAGTATGTCTTCAGCAGATCTTGGGATCAGAAAACTGGGCTACGAAACTCTCGG 6797
Query 5973 GATATTTGTGCATGCCCTTAAGAGATGTGAG-AAGAATGA-GAATGTAATGGGGCTTATG 6030
|||||||||| ||| |||| |||| ||| || |||||| | | |||||| || ||||| |
Sbjct 6798 GATATTTGTGGATGTCCTTGAGAGTTGT-AGGAAGAAT-ATGCATGTAACGGTGCTTAGG 6855
Query 6031 CTTCTGCTGATGCATGTGGAAAATGGAGTTGACAAACGGTGGAAAAGAATCCCAACAGTT 6090
|||||||| | | ||||| ||||||||||||| ||| ||| ||||||||||||| ||
Sbjct 6856 CTTCTGCTTACGTATGTGCAAAATGGAGTTGAGGAACAATGGCAAAGAATCCCAACTGTG 6915
Query 6091 TGTGCT-TATTTTGCTGCTGT-GACGTCTCTGATATTGTTGGATTCTTCTCACGAACTTT 6148
| |||| | |||| | |||| | | |||||||||||| |||||||||||||||||| ||
Sbjct 6916 TCTGCTGTTTTTTCC-GCTGAAG-CATCTCTGATATTGCTGGATTCTTCTCACGAACATT 6973
Query 6149 ATGCTCCCATAAATAAACTTTTGAAGAGCTCATCTACTCTGAACCTGAAGGGAATACCTT 6208
||| |||||||| ||||||||||||||| ||||| || ||||| |||| |||||||||||
Sbjct 6974 ATGTTCCCATAATTAAACTTTTGAAGAGGTCATCAACACTGAAGCTGAGGGGAATACCTT 7033
Query 6209 TGTTTTATGACTTTTTCTGGAGCAGCACTGTTGTCCTTCGATCACAGAGGCTTTGGGAAC 6268
||||| |||| |||||| |||| ||||||||| | || |||||||||||||||||| ||
Sbjct 7034 TGTTTCATGATTTTTTCGGGAGTAGCACTGTTAACTTTAGATCACAGAGGCTTTGGGTAC 7093
Query 6269 TTCGCCTAGTGTGTGTGGGCTTGGAATCAGAAGACGATGCTCAA-TTGTACATAAGAAAC 6327
|||||||||||| ||| ||||||||||||||||| ||||||||| || ||||| ||||||
Sbjct 7094 TTCGCCTAGTGTTTGTAGGCTTGGAATCAGAAGAGGATGCTCAAATT-TACATTAGAAAC 7152
Query 6328 TCTGTCCTTGATACATTAATGAGTTTTTCCTCATCCCCTCTTGCTGATGATGAAACTAAA 6387
|| ||||||| ||| | ||| |||||| |||||| |||||||| |||||||||||||||
Sbjct 7153 TCCATCCTTGAGACAGTGATGGGTTTTTTCTCATCTCCTCTTGCCGATGATGAAACTAAA 7212
Query 6388 GGACTAATCCTTCAGGTTGTGAGAAAGTCAGTCAAGTTCCATAAGATAGCCCGACATCTA 6447
||||||||||| ||||||||||||||||| ||||| || |||||||| ||||||||||||
Sbjct 7213 GGACTAATCCTGCAGGTTGTGAGAAAGTCCGTCAAATTGCATAAGATGGCCCGACATCTA 7272
Query 6448 GTTGAAAACTGTGGTCTTTTGTTATGGTGTTCATCGTTTATCTCAATGTTTG-CTACAAA 6506
||||||||||||||||| |||| ||||||||| || ||| |||||||||| | |||||||
Sbjct 7273 GTTGAAAACTGTGGTCTGTTGTCATGGTGTTCGTCATTTTTCTCAATGTT-GACTACAAA 7331
Query 6507 GCCCATTGGAGATGAAGATTCGCGCTTGGTAGCTGTCTTGGAGGTCATAACTGATACACT 6566
||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| ||||
Sbjct 7332 GCCCACTGGAGATGAAGATTCGCGCTTCGTAGTTGTCTTGGAGGTCATAACTGATGCACT 7391
Query 6567 CGCCTCCAGAAACG-TCACAGAGTGGTTGCAAAGATCTGCCCTCGAAGAGCTAATGGAAA 6625
|||||||||||||| | |||||||||| ||||||||||||||| |||| |||||||||||
Sbjct 7392 CGCCTCCAGAAACGAT-ACAGAGTGGTCGCAAAGATCTGCCCTAGAAGGGCTAATGGAAA 7450
Query 6626 TCTCGTCGCGTTTATACAGATTTTTAGGTGGTGGATTGGTATCAATGAAAGAAAATGGTA 6685
| || || |||||||||| | |||| |||| |||||| ||||||||| ||||||||||||
Sbjct 7451 TATCATCTCGTTTATACACACTTTTGGGTGATGGATTAGTATCAATGCAAGAAAATGGTA 7510
Query 6686 CTTTGGTGGATTTGATTTTGCAGATACTATCTGCTACTCTAAAGATATCACAGAAACGGA 6745
||| | |||||||||||||||||||||||||||||| ||||| |
Sbjct 7511 CTT-----------------C-GATACTATCTGCTACTCTAAAGATATCACATAAACGAA 7552
Query 6746 AACTGTACCAGCCACATTTCACCATCACAATCGAGGGGATATTCCAACTCTTTGAGGCAG 6805
|| | ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 7553 AAAAGAACCAGCCACATTTCACCATCACAATCGAGGGGATATTTCAACTCTTTGAGGCTG 7612
Query 6806 TTGCTAATTGCGACTCTCCTCAAGTCGAAGCTAGTGTAGAGCGTGGGCTTGATGTTATAT 6865
|||||| ||||| |||||||||||||||||||||| |||| || |||||||| |||||
Sbjct 7613 CTGCTAACTGCGATTCTCCTCAAGTCGAAGCTAGTGCAGAGGGTAGGCTTGATACTATAT 7672
Query 6866 TAATGAGCACCCCGCCAATTGACATAATATGCATGGACGTGGACAAGCTGAGAAGGTTTC 6925
|||||||||| |||||| |||| || ||||||||||||||| ||| ||||||||||||||
Sbjct 7673 TAATGAGCACACCGCCAGTTGAGATTATATGCATGGACGTGCACAGGCTGAGAAGGTTTC 7732
Query 6926 TTTTTTGGGGAAGCTCCACAGCCTTGAAGAGTGACTTTAAAAAGGGATCTAAGCCT 6981
|||| |||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 7733 TTTTGTGGGGATCCTCCACAGCCTTGAAGAGTGACCTTAAAAAGGGATCTAAGCCT 7788
Score = 455 bits (246), Expect = 3e-126
Identities = 348/396 (88%), Gaps = 12/396 (3%)
Strand=Plus/Plus
Query 1528 CAAAAGCTGCCTTTGAAAAGAGAAGCAGTGTTGGATAGTGGATTAGTAGGA-A-AAAGAA 1585
|||||||| ||||||| ||| |||||| |||||||| |||||||||| || | ||| ||
Sbjct 2731 CAAAAGCTATCTTTGAAGAGAAAAGCAGAGTTGGATATTGGATTAGTA-GATAGAAA-AA 2788
Query 1586 AACGCTTT-AAGCCATCTGAGAAGTG-TGTTTTGGAAAAAGAGGCTGGTGATATCGTCAT 1643
| || ||| ||| ||||||||| | | |||||||||| || |||| ||||||| |||||
Sbjct 2789 AGCG-TTTAAAGACATCTGAGATG-GCTGTTTTGGAAGAATTGGCTAGTGATATGGTCAT 2846
Query 1644 TTGTGGGGTAGGTTCTGATA-AAGATTTCTTTTTGGAAGAGGATACTGGGGATGCTCAGA 1702
| ||||| |||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 2847 TGGTGGGCTAGGTTCTGATACAA-ATATCTTTTTGGAAGAGGATACTGGGGATGCTCAGT 2905
Query 1703 TGACAGATCAGGCAGATGCTGAAAAAGAATATCTTGGGATTGTTTCAGAAATTTGGGGTT 1762
|||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 2906 TGACAGATCAGGAAGATGCTGAAAACGAATATCTTGGGATCGTTTCAGAAATTTGGGGTT 2965
Query 1763 CAGAGTTTTGGTCTAAGCCTTTTGATTCGGTCGAAGAAGCAGAGATGTTATTTCACATTA 1822
|||||||||| ||||||||| | | ||||||||| |||||||||||||| ||||| || |
Sbjct 2966 CAGAGTTTTGTTCTAAGCCTATCGCTTCGGTCGATGAAGCAGAGATGTTCTTTCAGATAA 3025
Query 1823 AGCTCCTGGATACCCTCAGGATTTATATGCGTTCTGTGCCTAATAT-CCTTGAAGGATCG 1881
||||||||||||||||| |||||||| ||||||||||||||||| | ||| |||| | |
Sbjct 3026 AGCTCCTGGATACCCTCGGGATTTATGTGCGTTCTGTGCCTAATGTGCCTA-AAGGGTTG 3084
Query 1882 TTTGATGTCTTCATGAAATTTCTGAGCACTTCTTCA 1917
|||||||||||||||||||||||||||| |||||||
Sbjct 3085 TTTGATGTCTTCATGAAATTTCTGAGCAGTTCTTCA 3120
Score = 248 bits (134), Expect = 6e-64
Identities = 208/241 (86%), Gaps = 15/241 (6%)
Strand=Plus/Plus
Query 921 TTCTGTTGGTTCAGAAATTCAGACTATCATGAATTGCATATGCCCTCGACCGTTTAGCCG 980
||||| ||||||||| | || ||||||||||| ||||||||||| ||||| |||||||
Sbjct 2451 TTCTGGTGGTTCAGAGGTCCATACTATCATGAAATGCATATGCCCCCGACCATTTAGCCA 2510
Query 981 GTCGTTGATCACTAGAGGGATGCTCCATTCTGATTTACTTGTGAAACATGGGACTTTGAG 1040
|||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct 2511 GTCGTTGATCGCTAGAGGGATGCACCATTCTGTTTTCCTTGTGAAACATGGGACTTTGAG 2570
Query 1041 ATTTCTCTGGGAGACGCTGAGGCTGTTGGATTCTTTTGTTACCGCTTGGAAACTTCGCTC 1100
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
Sbjct 2571 ATTTCTCTGGGAGACGCTGAGGCTGTGGGATTCTTTTGTTACTGCTTGGAAACTT---T- 2626
Query 1101 GTCTCATAGCTGCTCTGTTGAGCAAATTCAGGCTTCTCTTGAGCGGGATGTCATGGGTGA 1160
| ||| | | | | | | ||||||||||||||||||||||||||| |||| |||||
Sbjct 2627 G-CTC-T-G-T--T--G---ACCAAATTCAGGCTTCTCTTGAGCGGGATATCATAGGTGA 2675
Query 1161 G 1161
|
Sbjct 2676 G 2676
Score = 248 bits (134), Expect = 6e-64
Identities = 208/241 (86%), Gaps = 15/241 (6%)
Strand=Plus/Plus
Query 1263 TTCTGTTGGTTCAGAAATTCAGACTATCATGAATTGCATATGCCCTCGACCGTTTAGCCG 1322
||||| ||||||||| | || ||||||||||| ||||||||||| ||||| |||||||
Sbjct 2451 TTCTGGTGGTTCAGAGGTCCATACTATCATGAAATGCATATGCCCCCGACCATTTAGCCA 2510
Query 1323 GTCGTTGATCACTAGAGGGATGCTCCATTCTGATTTACTTGTGAAACATGGGACTTTGAG 1382
|||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct 2511 GTCGTTGATCGCTAGAGGGATGCACCATTCTGTTTTCCTTGTGAAACATGGGACTTTGAG 2570
Query 1383 ATTTCTCTGGGAGACGCTGAGGCTGTTGGATTCTTTTGTTACCGCTTGGAAACTTCGCTC 1442
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
Sbjct 2571 ATTTCTCTGGGAGACGCTGAGGCTGTGGGATTCTTTTGTTACTGCTTGGAAACTT---T- 2626
Query 1443 GTCTCATAGCTGCTCTGTTGAGCAAATTCAGGCTTCTCTTGAGCGGGATGTCATGGGTGA 1502
| ||| | | | | | | ||||||||||||||||||||||||||| |||| |||||
Sbjct 2627 G-CTC-T-G-T--T--G---ACCAAATTCAGGCTTCTCTTGAGCGGGATATCATAGGTGA 2675
Query 1503 G 1503
|
Sbjct 2676 G 2676
Score = 226 bits (122), Expect = 3e-57
Identities = 180/206 (87%), Gaps = 12/206 (6%)
Strand=Plus/Plus
Query 6983 TCTTGAGTGAAACAAAGCCAGAAACTTTG------TTG---GAATACTTGAAGCAAAGGA 7033
||||||| ||||||||||||||||||||| ||| |||||||||||| ||||||
Sbjct 7916 TCTTGAGCGAAACAAAGCCAGAAACTTTGCCAACATTGTTAGAATACTTGAAGAAAAGGA 7975
Query 7034 ATATTGAAGGCAGCATGACAAAATCGGAGCACATACTAGGGGAAGTAATCGTATATCTCC 7093
|| | |||||||| ||||||| |||||||||||| |||||||||||||||| |||||||
Sbjct 7976 ATCTCCAAGGCAGCGTGACAAATTCGGAGCACATAATAGGGGAAGTAATCGTGTATCTCC 8035
Query 7094 AAAAGC-T-T-CTGTGTACAAACAACATGGTTCTTCTTCCCTCTGTTGTATTTGCACTTT 7150
|||||| | | ||||||| |||| || ||||||||||||||||||||||||||||||||
Sbjct 8036 AAAAGCATCTGCTGTGTAGAAACTACGGGGTTCTTCTTCCCTCTGTTGTATTTGCACTTT 8095
Query 7151 CTCTCATGCTTCTTCGCAATGGCCTC 7176
|||||||| |||||||||||||||||
Sbjct 8096 CTCTCATGGTTCTTCGCAATGGCCTC 8121
Score = 163 bits (88), Expect = 2e-38
Identities = 197/245 (80%), Gaps = 25/245 (10%)
Strand=Plus/Plus
Query 7251 TACAGAGTCCGAAGGTGATTACAAGCTCATCAGATCTTTGTGTTCTAGAATTAGTTGTCC 7310
||| ||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 8133 TACCGAGTCAGAAGGTGGTTACAAGGTCATCAGATCTTTGTGTTCTAGAATTAGTAGTCC 8192
Query 7311 CCCTGAAGCTATTCCGGTCTGGAGATGGTCGTATTATCAGGGATGGAAGGATCTTTCAAC 7370
|||| ||||||||||||||||||||||| || |||| | | ||||||| || |
Sbjct 8193 TACTGAGGCTATTCCGGTCTGGAGATGGTC--AT-ATCA----TC-A-GGATCTTCCATC 8243
Query 7371 GGGAC-CAGCCACAGATCCGAAAAAGATCGATG--C---ATGC---C-AACAGCTTTTGC 7420
| || | ||||||||||||||| |||| |||| | |||| | || |||||||||
Sbjct 8244 TGAACGC-GCCACAGATCCGAAAGAGATTGATGAACTCTATGCGTGCCAAGAGCTTTTGC 8302
Query 7421 TGATATTCTCTGATATGCTTGG-GACAATGCCTCAGGAATCTCAACA-A-GT-GTTGCTT 7476
||||||| || ||||||||| | || || ||| | |||||||||||| | || |||||||
Sbjct 8303 TGATATTTTCGGATATGCTTCGAGA-AACGCCACGGGAATCTCAACAGACGTTGTTGCTT 8361
Query 7477 CGTGA 7481
||||
Sbjct 8362 GGTGA 8366
> AT4G27010.2 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal
(InterPro:IPR021714); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G72270.1); Has 312 Blast hits
to 226 proteins in 103 species: Archae - 0; Bacteria - 2; Metazoa
- 129; Fungi - 90; Plants - 83; Viruses - 0; Other Eukaryotes
- 8 (source: NCBI BLink). | chr4:13557974-13568296
FORWARD LENGTH=7880
Length=7880
Score = 4532 bits (2454), Expect = 0.0
Identities = 3759/4374 (86%), Gaps = 150/4374 (3%)
Strand=Plus/Plus
Query 1502 AGTCTCT-GAGCGGTTCTAGCGAAACCCAAAAGCTGCCTTTGAAAAGAGAAGCAGTGTTG 1560
||||||| || ||||||||| | ||| ||||||||| | ||||| |||||||||| ||||
Sbjct 1678 AGTCTCTGGA-CGGTTCTAGTGGAACTCAAAAGCTGTCATTGAAGAGAGAAGCAGAGTTG 1736
Query 1561 GATAGTGGATTAGTAGGAA-AAAGAAAACGCTTTAAGCCATCTGAGAAGTG-TGTTTTGG 1618
||||||||||||||||||| ||| ||||||| |||||| ||| |||||| | ||||||||
Sbjct 1737 GATAGTGGATTAGTAGGAAGAAA-AAAACGCATTAAGCGATCGGAGAAG-GATGTTTTGG 1794
Query 1619 AAAAAGAGGCTGGTGATATCGTCATTTGTGGGGTAGGTTCTGATAAAGATTTCTTTTTGG 1678
|| ||||||||| |||||| |||||| ||||||||||||||||||||||| |||||||||
Sbjct 1795 AAGAAGAGGCTGTTGATATTGTCATTGGTGGGGTAGGTTCTGATAAAGATATCTTTTTGG 1854
Query 1679 AAGAGGATACTGGGGATGCTCAGATGACAGATCAGGCAGATGCTGAAAAAGAATATCTTG 1738
||||||| | ||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 1855 CTGAGGATAATATGGATGCTCATATGACAGATCAGGAAGATGCTGAAAAAGAATATCTTG 1914
Query 1739 GGATTGTTTCAGAAATTTGGGGTTCAGAGTTTTGGTCTAAGCCTTTTGATTCGGTCGAAG 1798
||||||||||||| |||||| ||||||| |||| ||||| ||| |||||||||||||||
Sbjct 1915 GGATTGTTTCAGATATTTGGATTTCAGAGCTTTGTTCTAACCCTATTGATTCGGTCGAAG 1974
Query 1799 AAGCAGAGATGT-TATTTCACATTAAGCTCCTGGATACCCTCAGGATTTATATGCGTTCT 1857
|||||||||||| | |||||||| ||||| |||||| |||||| ||||||| ||||| ||
Sbjct 1975 AAGCAGAGATGTGT-TTTCACATAAAGCTTCTGGATGCCCTCAAGATTTATGTGCGTGCT 2033
Query 1858 GTGCCTAAT-ATCCTTGAAGGATCGTTTGATGTCTTCATGAAATTTCTGAGCACTTC-TT 1915
|| |||||| | |||||||||||||||||| ||||||||||||||||||||| ||| ||
Sbjct 2034 GTACCTAATGA-GCTTGAAGGATCGTTTGATATCTTCATGAAATTTCTGAGCAATTCTTT 2092
Query 1916 CAGGTTTGCCAGCCGAATTGCAGAGAGCTCACTTGTCTTTGGTAAATGAATACATCAGTT 1975
| ||| |||||| ||| ||||||| |||| |||||||||| ||| ||| ||||||||||
Sbjct 2093 C-GGTATGCCAGTTGAACTGCAGAGGGCTCTCTTGTCTTTGCTAAGTGAGTACATCAGTT 2151
Query 1976 GGACGCCAAAGTCCCAAAGTGAGAGAGAGAGTGTTCCTACAAGAATTCCACCACTCATGT 2035
||||||||||||| |||||| || |||| | ||||||||||||||||||||| |||
Sbjct 2152 GGACGCCAAAGTCTCAAAGT----GACAGAG-G-TCCTACAAGAATTCCACCACTTATGC 2205
Query 2036 TCAAGCATTTGCATGTATTCATTAATTTGTTACCTTTTTCATCACACGACGAGGTGAAGG 2095
||||||||||| ||| |||||||||||||||| ||||||| ||||| ||| ||||||||
Sbjct 2206 ACAAGCATTTGCGTGTGTTCATTAATTTGTTACTTTTTTCACCACACAACGGGGTGAAGG 2265
Query 2096 ATCTATCGTATAATTTAGCACTGGTAGCTATGAGCAGCACCGGTGCATTCGACAAA-AAT 2154
||||| |||| ||||||||| ||| |||||||| ||| || |||||||| || ||| ||
Sbjct 2266 ATCTAGCGTACAATTTAGCAGTGGCAGCTATGAACAGTACTGGTGCATTTGA-AAACAAC 2324
Query 2155 CCAAGTGAAATTGGGGCATGGTTCCGGTTTCTACCAGGTTTTGGAAAGATTAAACCACCT 2214
|||||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||
Sbjct 2325 CCAAGTGAAATTGGTGCATGGTTCTTGTTTCTACCATGTTTTGAAAAGATTAAATTACCT 2384
Query 2215 CTT-ATGGTTCAGGAGGCTGTACAGAGCATGTCATCAGTTGTCATCTCCTTTTTATGTGA 2273
||| | | ||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 2385 CTTGA-GCTTCAGGAGGCTGTACAGAGCATGTCATCAGTTGTCGTGTCCTTTTTATGTGA 2443
Query 2274 TGCAGTTACGACTGTTGGAAATAATTTATTCAAGCAATGGGAAATTGTCAGAAGTAGATT 2333
||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 2444 TGCAGTTTCGACTGTTGGAAATAATTTATTCAAGCACTGGGACATTGTCAGAAGTAGCTT 2503
Query 2334 GTCCCATTTAAAAGGTG-ACTCAATTGGTTTTAGCCCCTTAATTGTTTGTATTCTGGAGA 2392
||||||||||||||||| | |||||||||||||||||| ||||| ||||| | || |||
Sbjct 2504 GTCCCATTTAAAAGGTGTA-TCAATTGGTTTTAGCCCCCTAATTATTTGTCTACTACAGA 2562
Query 2393 ACTGTGTTAGGCTGCTTAAGTCTGAATCTAAAAAATATTCTTTACCAGACAAGTCAGCAA 2452
| ||||| ||||| || || ||||||||| |||| ||||||||||| ||||||||||
Sbjct 2563 AGTGTGTGAGGCTACTAAATTCTGAATCT--AAAA-CGTCTTTACCAGAGAAGTCAGCAA 2619
Query 2453 TATCTCTGTACGTCTGCAGCACATTGAAATATCTTTTGCAAACTCAGGTAGATTCC-AGT 2511
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
Sbjct 2620 TATCTCTGTACGTCTGCAGCACACTGAAATATCTTTTGCAAACTCAGGTAGATTCCAAAT 2679
Query 2512 GGACTCTCATGTTTGGTCCAGTCAGTTTTGTCTGAGGTGGTTGATGGATCTAAGGATTCT 2571
||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct 2680 -TACTCTCATGTTTGATCCAGTCAGTTTTATCTGAGGTGGTTGATGAATCGAAGGATTCT 2738
Query 2572 TTATGTGAATGGAGGCCATTGAGGATGTTGCTGCT-TTTCTCACAATCTTTGTCAGACaa 2630
||||| ||||||||||||||||| ||||| || | |||||||||||| ||||| || |
Sbjct 2739 TTATGCGAATGGAGGCCATTGAGAATGTTACT-TTGTTTCTCACAATCCCTGTCAAACGA 2797
Query 2631 aaaaaCTTTCATCTTACATTCCAGAAGGACAACGAGTTTACTTGCTGACACTTCTTTTGC 2690
|||| || ||||||| |||||||||||||||||| || ||| |||||||| |||||||||
Sbjct 2798 AAAACCTATCATCTTGCATTCCAGAAGGACAACGGGTCTACCTGCTGACAGTTCTTTTGC 2857
Query 2691 AGATTCTCTTGATGAGAT-AAAAGGACTGGTGAGAAGAAGTATTTCTCTGGATGAAATCG 2749
||| ||||||||||||| |||| |||| || ||||| ||||||| ||||||||| |
Sbjct 2858 AGAGACTCTTGATGAGATCAAAA-GACTAGT---TAGAAGCATTTCTCCGGATGAAATTG 2913
Query 2750 CAGGAATCGTTAAAGCGTTTTCTTCTGCATTGATATGTGCAACACCTGAATCAATTTTGG 2809
||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2914 CAGGAATAGTTAAAGCGTTTTCTTCTGCATTGATATGTGCAACACCTGAATCGATCTTGC 2973
Query 2810 AGAATTTTGCTTCTGTGATGGCTATTTCTTGGGA-TTTATATGGAACATCATTCTCATTT 2868
| ||||||||||||||||||| | ||||||||| ||| ||||||||| |||||||||||
Sbjct 2974 AAAATTTTGCTTCTGTGATGGATGTTTCTTGGGCCTTT-TATGGAACACCATTCTCATTT 3032
Query 2869 TTACAGTCCATCGTCTTTCTAGAGGAAAACTTCCTCGGAAACCTTTCAAAGCTATCACCT 2928
|||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 3033 TTACAGTCCATCACCTTTCTAGAGGAAAATTTCCTTGGAAACCTTTCAAAGCTATCGCCT 3092
Query 2929 GACTTATTTG-TGAGAGGTTTAGAACTTACTAGGTCAAGGAATCTCCGTGAAGGAATAGT 2987
||||| |||| | ||||| |||| ||||| ||||| ||||||| ||||||||| |||
Sbjct 3093 GACTTGTTTGCTTC-AGGTTCAGAATTTACTGGGTCAGGGAATCTGTGTGAAGGAACAGT 3151
Query 2988 AGATAGTGAGATTGATTTTGCTGACTACTCATCCGTAACTGAAGCAATCAAAAGTAAGAT 3047
||||||||||||||||||| ||| | |||||||||||||||||| ||||| |||||||||
Sbjct 3152 AGATAGTGAGATTGATTTTTCTGGCCACTCATCCGTAACTGAAGAAATCAGAAGTAAGAT 3211
Query 3048 GGAGATTCGTGATATTTATTCTTCTGCCTTGTCTATGTTCTTCGAGCAGGCTCCTTTTCC 3107
||| | ||||||||| | ||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct 3212 GGACAATCGTGATATGGAATCTTCAGCCTTCTCTATATTCTTAAAGCAGGCTCCTTTTCC 3271
Query 3108 AGTATTACTTAACGAAATTATGAGCATGGATATATCTTGCGTGCCAGAGTTTCCAAGATT 3167
||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |
Sbjct 3272 TGTATTACTTAACGCAATTATGAGCATGGATATATCTTGCTTACCAGAGTTTCCAAGAAT 3331
Query 3168 AGCAGAGCTACTGCTGC-AA--GTTTGGCAACCTAAAAGTGATAGTATTGAATC-AGATA 3223
| |||||||| |||||| || |||| || |||||||||| ||||||||| || | |||
Sbjct 3332 ATCAGAGCTATTGCTGCTAAAAGTTTCACAGCCTAAAAGTGGTAGTATTGACTCCA-ATA 3390
Query 3224 TCCGATTAATACTATTCTGGCTCTTCCAAATACGATCATCTTACAAGATTCAACCAGCTT 3283
| | ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 3391 TTCAATTAATACTGTTCTGGCTCTTTCAAATACGATCATCTTACAAGGTTCAACCAGCTC 3450
Query 3284 CGGTACT-CTGTCGACTCTCTGAGATCTGCTTACGTCTCTTGAAGCACTTGTTCTCGCAA 3342
| ||||| | || ||||||||||||||||||||||||| ||||| |||||||||| |||
Sbjct 3451 CAGTACTTCA-TCAACTCTCTGAGATCTGCTTACGTCTCATGAAGAACTTGTTCTCTCAA 3509
Query 3343 ATATCAGAACGGG-GCTTTGTTTCTGGACCTTCTTCAGATAAGTTGGTTGCTCCTTTTGC 3401
|||||||||| || |||| ||||||||||| |||||| |||||||| |||| |||||||
Sbjct 3510 ATATCAGAACCGGAGCTT-GTTTCTGGACCCTCTTCAAATAAGTTGCCTGCTTCTTTTGC 3568
Query 3402 AAAGTGGAAGCATCAAGTGGCCCAGACAGTTCTTTGCCATCCAGTTGTGATGGCACTGTT 3461
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct 3569 AAAGTGGAAGCATCAAGTGGCCGAGACAGTTCTTTGCCACCCAGTTGTGATGGCACTGTT 3628
Query 3462 GGAGAGTCCCTTGGATTGTGGCACATTACCTCCAGTGCATAATGTTAAGATTTTTTCAGA 3521
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 3629 AGAGAGTCCCTTGGATTGTGGCACATTACCTCCAGTGCAGAATGTTGAGATTTTTTCAGA 3688
Query 3522 AACGTCGCTGACGACGAGCAGGCTAGTTATTT-GTGAAATAGATCAACACATCCTTGATC 3580
||| |||||||| | | |||||||||| |||| ||||||||||||||||||||||| |||
Sbjct 3689 AACATCGCTGACAATGGGCAGGCTAGT-ATTTAGTGAAATAGATCAACACATCCTTAATC 3747
Query 3581 TATTGGTTTCTATTTGTGAGCACTTTTTGTTTGATGAGAGACAC---ATTGTGCAGGAAG 3637
|||||||||||| |||||| ||||||||||||||||||| || | | | || ||||
Sbjct 3748 TATTGGTTTCTACTTGTGAACACTTTTTGTTTGATGAGAAACCCCCCAATCTGT-GGAAA 3806
Query 3638 GAG-ATCTCAGGGAAAATAAGTCAAGTACGGTTTTTAAGGACTTGGT-GCAAAGGCTTCT 3695
||| | |||||| |||||||||||| || | |||||||||||||| | ||||||||||
Sbjct 3807 GAGGACCTCAGGAAAAATAAGTCAATTATAGCGTTTAAGGACTTGGTTG-AAAGGCTTCT 3865
Query 3696 TTTGTTATTCAGAGACAAGTTTGAGCTTTGTGTTGGTTCTCAAAGTTACGCTCCGCTTCT 3755
||| ||| || | ||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 3866 CTTGGAATTTAGGGTCAAGTTTGAGCTTTGTGTTGGTTCTCAAAGTTACGTTTCTCTTCT 3925
Query 3756 CCAACCATCACAATTAATTCATGCGTTGTTGAGATTTATTTCACCTTTCAAAATTTT-AG 3814
||||||| ||||||| |||||||| |||||||||||||| |||||||| ||| |||| |
Sbjct 3926 CCAACCAGCACAATTGATTCATGCTTTGTTGAGATTTATATCACCTTTTAAACTTTTTA- 3984
Query 3815 AGCTAGCCCGTTCCATGCTGAGTAAAATTGATGAGGAAGAATTGGCTAGCCCAAATTCGA 3874
| | || | ||||||| ||||||||||||||||||||| ||| | ||||||||||| |
Sbjct 3985 ATATTGCTCATTCCATGTTGAGTAAAATTGATGAGGAAGGATTAACAAGCCCAAATTCAA 4044
Query 3875 GTATGATTATCAGTTTGGGATTGGATATTGCTGGCGGAGCTTTTGAAATGCTTATATCT- 3933
|||| ||| ||||||||||||||| |||||| || |||||||||||||||||| ||| |
Sbjct 4045 GTATTATTCTCAGTTTGGGATTGGGTATTGCAGGTGGAGCTTTTGAAATGCTTGTAT-TA 4103
Query 3934 TATTCACACCTGCCGGCTGCTAAGAGAGGGTTATATGATTTGCTGTGGGAATTAAAAGAA 3993
|||||||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 4104 TATTCACACCAGCCGACTGCTAAGAGAGGGGTATATGATTTGCTGTGGGAATTAGAAGAA 4163
Query 3994 GAGAATTATGACAGTATAC-TCATTGAGGAAGTCTATAGCATGGCATGCAGGTTTTCTAC 4052
||||||||| ||||| || |||||||| |||| |||||||||||||||| |||||||||
Sbjct 4164 AAGAATTATGCCAGTA-ACATCATTGAGAAAGTATATAGCATGGCATGCAAGTTTTCTAC 4222
Query 4053 CTCTTTTGGTTTGGTTTCGGCAGATACTTGTTTGCTTAAAGTT-G-GGAGCAGCATTTTC 4110
|||| ||| ||||| ||| ||||||| |||||||||||||||| | || | | ||||||
Sbjct 4223 CTCTCTTGATTTGGATTCAGCAGATATTTGTTTGCTTAAAGTTTGTGGTG--GTATTTTC 4280
Query 4111 AGGGGGAAACATAATCGGCATT--GCAATGTTCATCCATTGACCGTGATAATTTCACAGA 4168
||||| |||||||||| ||| || |||| | || ||| | ||| |||||||| ||
Sbjct 4281 AGGGGAAAACATAATCAAAATTATGC--TGTTGACCCGTTGGTCTTGAAAATTTCACTGA 4338
Query 4169 TTGTTGGGAGAACTCCTAAAGACTTGATTATCCATTATATTAACCAGCCAAGCATGACCA 4228
||||||| ||||| ||| |||||||||||||||||| ||||||| | ||||||| ||||
Sbjct 4339 TTGTTGGAAGAACCCCTGAAGACTTGATTATCCATTGCATTAACCGGGCAAGCATAACCA 4398
Query 4229 GAGCCAAGATATTGTTCTATCTTGTGGAGTCCAGTCCCTTGCATCTGTCAGTCTTTGGAC 4288
||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 4399 GAGCCAAGATATTATTCTACCTTGTGGAGTCCAGTCCCTTGCATCTGTTAGTCTTTGGAC 4458
Query 4289 ACTCTTTCTTTAGTATGCTAAGTAAGCAACAGGATG-----GCTCT----GAT---CAGT 4336
||| |||||||||||||||||||||| ||||||||| ||||| ||| ||||
Sbjct 4459 ACTTTTTCTTTAGTATGCTAAGTAAGAAACAGGATGACTCTGCTCTTACAGATGATCAGT 4518
Query 4337 TTATCATGCTTCCGCCTGCCGTGCTATCGTATCTGGCATCAGTTTAT-GCAAAAATCGAG 4395
|||||||||||| |||||| ||||||||||||||| |||||||| || |||||| |||||
Sbjct 4519 TTATCATGCTTCTGCCTGCTGTGCTATCGTATCTGACATCAGTT-ATTGCAAAACTCGAG 4577
Query 4396 ACGCCGTGTAGTAGATGTTTAGATATAACTTCACTTTATTCAAATAAACTAACAAACGGT 4455
| ||| |||| ||||||||| |||||||||||| |||||||||||| ||||| ||| |||
Sbjct 4578 AAGCCTTGTAATAGATGTTTGGATATAACTTCAGTTTATTCAAATATACTAATAAATGGT 4637
Query 4456 TTTCATCAGTGGCCCAGTTTTTTGTCTGGGTGGATCTTTGAAGAGAAGTATGAAGAGATT 4515
|||| ||||||||| || |||||| || |||| ||||||||||||||| |||||||||||
Sbjct 4638 TTTCTTCAGTGGCCGAGGTTTTTGGCTAGGTGCATCTTTGAAGAGAAGCATGAAGAGATT 4697
Query 4516 CTTATGTCGACAACTGAGGATATTGACACTATGTTTAATGCGAGTCTTCTTGGGATGGCA 4575
||| |||| || ||||||||||| || ||||||||||||||||||||| |||||| ||||
Sbjct 4698 CTTCTGTCAACGACTGAGGATATGGAAACTATGTTTAATGCGAGTCTTATTGGGAAGGCA 4757
Query 4576 GTACGTATGTTTCAGTGTCACTTTGCCTTGAATGAAAGTCCAACTAAA-ATAGACGATCT 4634
|||||||||||||| | |||||| |||||| |||||||||||||||| | ||| |||||
Sbjct 4758 GTACGTATGTTTCAATACCACTTTTCCTTGACTGAAAGTCCAACTAAAGA-AGATGATCT 4816
Query 4635 CTTAAAGGTATTCTA-TTCCATGTTTCC-C-CACGCTAGTGCTGGCAAAGAGATGTTTGA 4691
||| |||||||| || |||||||||||| | || | |||| ||||||| |||||||| ||
Sbjct 4817 CTTTAAGGTATT-TAATTCCATGTTTCCTCTCA-G-TAGTACTGGCAAGGAGATGTTGGA 4873
Query 4692 TTACGAGATAAAAGAAATGGACGCTCAGTCAGTACACTATATGTTTAATGTTGCTATCCG 4751
|||||||||||| ||| |||||| |||||||||| || | || || ||||||||||||||
Sbjct 4874 TTACGAGATAAAGGAAGTGGACGTTCAGTCAGTAGACCAAATATTAAATGTTGCTATCCG 4933
Query 4752 TGTAGTTGCAAAAGTAGA-ATTTTCAAGGATCTGTTTGTTTCCTGAGGATAGCAGTATAT 4810
||| |||||||||||| | | |||||||||| |||||||||||||||||||||||||| |
Sbjct 4934 TGTGGTTGCAAAAGTA-ACAGTTTCAAGGATTTGTTTGTTTCCTGAGGATAGCAGTATGT 4992
Query 4811 GTCATTTTAAAAGT-CAAGCTGTTAGTTGTGC-AAGGGAAAGTT-TTCCAGAAATGGGAT 4867
||||| | ||| || || || | || ||||| |||| |||||| ||| | |||| ||||
Sbjct 4993 GTCATCTCAAACGTGCA-GCAGGTACTTGTGTGAAGG-AAAGTTCTTCAA-AAATTGGAT 5049
Query 4868 CC--T-G--CAG----AG-AGAGT--TTACTAAATGCTTTAGTTGAA-AGTTGGCCATGT 4914
| | | || | | || || ||| ||||||||||| || ||||||| ||||
Sbjct 5050 GCAATAGAGCAATTTTATCAAAGCCGTTGCTAGATGCTTTAGTT-AATAGTTGGCAATGT 5108
Query 4915 GTTGTCAAGAGATCTGATGGTTATTTTAAAGGGAATTCTGAAAGAAAACAAGACAAATGT 4974
|||||||||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||
Sbjct 5109 GTTGTCAAGAAATCTGATGGATCTTTTAAAGGGAATTATGAAGGAAAACAAGACAGATGT 5168
Query 4975 TGGTTCCT-GTGCAAAAGCCTTGAAAACTTCATTTTGAGAAGTATTCGAAAGATTTTG-A 5032
|||| ||| ||||||||| |||||||||||||||||||||||||||| | || ||||| |
Sbjct 5169 TGGT-CCTTGTGCAAAAGTCTTGAAAACTTCATTTTGAGAAGTATTCTACAGTTTTTGGA 5227
Query 5033 AATACATGTGTGAGGAGCTTATT-AACTTGGATTCTCTTCCTTTCTTGGAGAAACTAATG 5091
|| |||||||||||||||| || || |||||||||||||| ||| |||| | | | |||
Sbjct 5228 AAG-CATGTGTGAGGAGCTTGTTCAA-TTGGATTCTCTTCCCTTCCTGGACAGATTGATG 5285
Query 5092 AAATCAGTTCTCCTGTATAGATTTGAGGACTCAAAGACATTGAAGATACTGAGGGACATT 5151
||||||||||| || ||||||||||||||||| |||||| ||||||||||||| || |||
Sbjct 5286 AAATCAGTTCTTCTCTATAGATTTGAGGACTCGAAGACACTGAAGATACTGAGAGAAATT 5345
Query 5152 TTCTCCTTATTGTCGAGAGGAAAGTACTCATGTACACTATATATCCAACTCCTGGTATCT 5211
|||||||||||||| ||||| |||||||||| | ||| ||||||||||| | | ||| |
Sbjct 5346 TTCTCCTTATTGTCTAGAGGGAAGTACTCATATGCACCATATATCCAACGCTTAATATAT 5405
Query 5212 CACTCTCAGTTTACACCAAC---CA-T-C-CT----AT--CAGCCTCGCATACTGGTGAA 5259
||||||| |||||||||||| || | | || || || |||| |||||||||||
Sbjct 5406 CACTCTCGGTTTACACCAACTATCAGTTCTCTCTCCATATCATCCTCAAATACTGGTGAA 5465
Query 5260 TTATTGAGGCCTGTCTCCAGCATTCTAAAACATCTTAGCATCCCAAGTCCAAATTCTGTT 5319
||||| ||||||||||||||||| ||||| ||||||| |||| |||||| |||||||
Sbjct 5466 TTATTCAGGCCTGTCTCCAGCATCCTAAATCATCTTATCATCTTAAGTCCGGATTCTGTC 5525
Query 5320 GGAGTTGGAAGTTGTTGTCTCGAAGCACCCGACTATGTGAAGCAGTTAGAAATTGTCAAA 5379
||||| ||| |||||||| |||||||| | |||| |||||||||||||||||||||
Sbjct 5526 AGAGTTAAAAGGTGTTGTCTTGAAGCACCTAAGTATGCAAAGCAGTTAGAAATTGTCAAA 5585
Query 5380 ATTCTCAGAGTGCTGCTTTCCAAATGTGGAAAAGGTTCGGGGATCAAT---CTGAA---A 5433
||||||||||||||||| ||||| |||||||||| ||| || || || ||| |
Sbjct 5586 ATTCTCAGAGTGCTGCTCTCCAATTGTGGAAAAGATTCAGGAATGAAAGAGCTGCTTTCA 5645
Query 5434 GAGCTGCGCTTTCtttttttGTGTTCTTATGGTGCAACTATGAGCGAAATTGACTTAGAG 5493
|| || | ||||||| ||||||||||||||||||||||| |||| ||||| ||||| |||
Sbjct 5646 GATCTACACTTTCTTCTTTTGTGTTCTTATGGTGCAACTCTGAGAGAAATCGACTTGGAG 5705
Query 5494 CTCTACAAGTTGATGCATGATATCGAGTTGATTGAGGACGAACAGAGGCTGAATGTTTCT 5553
|||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||
Sbjct 5706 ATCTACAAGCTGATGCATGATATCAAGTTGATTGAGGCCGAACAGACACTGAATGTTTCT 5765
Query 5554 GAAACAGATTATTTGTGGGGTAAAGCTGCCTTGAAAATAAGAGAGGGACTGCGTTTTTCT 5613
|||||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct 5766 GAAACAGATTATTTGTGGGGTAAAGCTGCCTTGAAAATAAGAGAGGGACT-C-T----CT 5819
Query 5614 CAGGATGCATATTATGGTGGTGAAGCTGGTTTGGTGGAAAATCTCCAGCAGATTCTT-TT 5672
|||||||||| | ||| | || ||| || ||| |||||| || ||| |||| |||| ||
Sbjct 5820 CAGGATGCATCTGATGTTTGTCAAGTTGATTTAGTGGAAGATGTCCGGCAGGGTCTTATT 5879
Query 5673 CAAAGAGAATCTTTG-GATTGATCCCAAAATATGTGCTCAAACTCTTTTGTATTTTCCCT 5731
|||||||||||||| | ||||||||||||| ||||||| |||| |||||| |||||| |
Sbjct 5880 -AAAGAGAATCTTTGTG-TTGATCCCAAAATCTGTGCTCTAACTGTTTTGTTTTTTCCTT 5937
Query 5732 ATCAACGAACTGCAGAGGTATCGGATAACTCTTACATATCTGATGATCCAGTAA 5785
||||||| ||| ||||| |||||| || | |||| ||| |||||||||| |||
Sbjct 5938 ATCAACGTACTACAGAGAAATCGGAGAATTTTTACCTATATGATGATCCAATAA 5991
Score = 1162 bits (629), Expect = 0.0
Identities = 873/990 (88%), Gaps = 20/990 (2%)
Strand=Plus/Plus
Query 6003 GAAGAATGAGAATGTAATGGGGCTTATGCTTCTGCTGATGCATGTGGAAAATGGAGTTGA 6062
|||||| || |||||| ||||||| ||||||||| ||| |||| |||||||||||||
Sbjct 6260 GAAGAACAAGCATGTAACAGGGCTTAGGCTTCTGCTAATGTATGTACAAAATGGAGTTGA 6319
Query 6063 CAAACGGTGGAAAAGAATCCCAACAGTTTGTGCTTA-TTTTGCTGCTGTGACGTCTCTGA 6121
||| ||| ||||||||||||| |||| ||| || ||||||||||| ||| ||| |||
Sbjct 6320 GGAACCATGGCAAAGAATCCCAACTGTTTCTGC-TATTTTTGCTGCTGAGACATCTATGA 6378
Query 6122 TATTGTTGGATTCTTCTCACGAACTTTATGCTCCCATAAATAAACTTTTGAAGAGCTCAT 6181
||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 6379 TATTGTTGGATCCTTCTCACGAACATTATGTTCCCATAAATAAACTTTTGAAGAGCTCAT 6438
Query 6182 CTACTCTGAACCTGAAGGGAATACCTTTGTTTTATGACTTTTTCTGGAGCAGCACTGTTG 6241
|||| ||||| |||| ||||||||| |||||| |||| ||||||||||||||| |||||
Sbjct 6439 CTACACTGAAACTGAGGGGAATACCATTGTTTCATGATTTTTTCTGGAGCAGCGCTGTTA 6498
Query 6242 TCCTTCGATCACAGAGGCTTTGGGAACTTCGCCTAGTGTGTGTGGGCTTGGAATCAGAAG 6301
| || |||| |||||| |||||||||| |||||||||| | |||||||| ||||||| |
Sbjct 6499 ACTTTAGATCGCAGAGGTTTTGGGAACTACGCCTAGTGTATCTGGGCTTGAAATCAGATG 6558
Query 6302 ACGATGCTC-AATTGTACA-TAAGAAACTCTGTCCTTGATACATTAATGAGTTTTTCCTC 6359
| |||| || |||| |||| ||| |||||| ||||||| ||| | || |||||||||||
Sbjct 6559 ATGATGTTCAAATT-TACATTAA-AAACTCAATCCTTGAGACAGTGATTAGTTTTTCCTC 6616
Query 6360 ATCCCCTCTTGCTGATGATGAAACTAAAGGACTAATCCTTCAGGTTGTGAGAAAGTCAGT 6419
||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 6617 ATCTCCTCTTGCTGATGATGAAACTAAAAGACTAATCCTTCAGGTTGTGAGGAAGTCAGT 6676
Query 6420 CAAGTTCCATAAGATAGCCCGACATCTAGTTGAAAACTGTGGTCTTTTGTT-ATGGTGTT 6478
||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 6677 CAAATTCCATAAGATAGCCCGACATCTAGTTGAAAACTGTGGTCTGTT-TTCATGGTGTT 6735
Query 6479 CATCGTTTATCTCAA-TGTTTGCTACAAAGCCCATTGGAGATGAAGAT-TCGCGCTTGGT 6536
| |||||||| |||| | ||| |||||||||| |||||||| ||||| | || ||||||
Sbjct 6736 CGTCGTTTATTTCAAAT-TTTACTACAAAGCCGATTGGAGACAAAGATCT-GCACTTGGT 6793
Query 6537 AGCTGTCTTGGAGGTCATAACTGATACACTCGCCTCCAGAAACGTCACAGAGTGGTTGCA 6596
|| |||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct 6794 AGTTGTCTTGGAGATCATAACTGATGTTCTCGCCTCCAGAAACATTACAGAGTGGTTGCA 6853
Query 6597 AAGATCTGCCCTCGAAGAGCTAATGGAAATCTCGTCGCGTTTATACAGATTTTTAGGTGG 6656
| ||| || |||||||| ||||||||||||||| ||||||||||||| | ||||||||||
Sbjct 6854 ACGATTTGGCCTCGAAGGGCTAATGGAAATCTCATCGCGTTTATACAAACTTTTAGGTGG 6913
Query 6657 TGGATTGGTATCAATGA-AAGAAAATGGTACTTTGGTGGATTTGATTTTGCAGATACTAT 6715
||| ||||||||| | | ||||||||||||||| || ||||||||||||||||||||||
Sbjct 6914 TGGCTTGGTATCAGT-ACAAGAAAATGGTACTTCAGTTGATTTGATTTTGCAGATACTAT 6972
Query 6716 CTGCTACTCTAAAGATATCACAGAAACGGAAAC-TGTACCAGCCACATTTCACCATCACA 6774
|||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 6973 CTGCTACTCTAAAGATTTCACAGAAACG-AAACATGTACCAGCCACATTTCACCATCACA 7031
Query 6775 ATCGAGGGGATATTCCAACTCTTTGAGGCAGTTGCTAATTGCGACTCTCCTCAAGTCGAA 6834
|||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||
Sbjct 7032 ATCGAGGGAATATTCCAACTCTTTGAGGGTGTTGCTAATTTTGGTTCTCCTCAAGTCGAA 7091
Query 6835 GCTAGTGTAGAGCGTGGGCTTGATGT--TATATTAATGAGCACCCCGCCAATTGACATAA 6892
||||||| |||| |||||||| || | |||||||||||||||||||||| ||||||||
Sbjct 7092 GCTAGTGCAGAGAGTGGGCTT-AT-TACTATATTAATGAGCACCCCGCCAGTTGACATAT 7149
Query 6893 TATGCATGGACGTGGACAAGCTGAGAAGGTTTCTTTTTTGGGGAAGCTCCACAGCCTTGA 6952
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |
Sbjct 7150 TATGCATGGACGTGGACAAGCTGAGAAGGTTTCTTTTGTGGGGAACCTCCACAGCATTAA 7209
Query 6953 AGAGTGACTTTAAAAAGGGATCTAAGCCTA 6982
||||||||||||||||||||||||| ||||
Sbjct 7210 AGAGTGACTTTAAAAAGGGATCTAAACCTA 7239
Score = 715 bits (387), Expect = 0.0
Identities = 611/719 (85%), Gaps = 15/719 (2%)
Strand=Plus/Plus
Query 208 CCAGTGATGGCTTTCAGACCATCTCTTGAAGCTAAACTTAGAGGATTGCTGTATAAGATT 267
||||||||||||||||||||||| | |||||||| ||||||| |||| || |||| |||
Sbjct 240 CCAGTGATGGCTTTCAGACCATCCCACGAAGCTAAGCTTAGAGAATTGTTGCATAATATT 299
Query 268 TGCTTACATGAGATTAAGCTATGCTCTGATGCTTTAAAAGAGTTTGTTAAGTTACTAAAG 327
||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||
Sbjct 300 TGCTTACATGAGATTAAGCTATGCTCTGATGCTGCAAAAGAATTTGTTAAGTTACTGAAG 359
Query 328 GGAGAAACTGGCGGCCATTTGTTGCGTCTTTATTTCCACAACTCACCCAAA-TTTAAGGA 386
|||||||| || ||| |||||||||||||||||||||| | |||||| ||| ||| ||
Sbjct 360 GGAGAAACCGGTGGCGATTTGTTGCGTCTTTATTTCCAGAGCTCACC-AAACTTTGCTGA 418
Query 387 GCTTCTAGATGTATGGAAGTTTCTACATGaaaaaaaaCAAGGAGTGTCCTATATATTCTC 446
|||||| || | ||||||| ||| |||||||||| |||||| ||||||||||||||||
Sbjct 419 GCTTCTTGAGGCATGGAAGCTTCGACATGAAAAA---CAAGGATTGTCCTATATATTCTC 475
Query 447 GCTTTTCCAGACGCTTTTGAGTCATCCAGAGGGAAAAGGTACATCAGCTGATATTGGAAG 506
|||| |||||||| |||||||||||||||||||||||| || |||| |||||||||||||
Sbjct 476 GCTTATCCAGACGATTTTGAGTCATCCAGAGGGAAAAGATAGATCAACTGATATTGGAAG 535
Query 507 AGCTATTAACCAGCTTGGCAGGTCACTTATTGATGAAAAACTGCATGACATTTACAATGC 566
||||||| ||||| |||| |||| |||| |||| |||||| || |||| |||||||| |
Sbjct 536 AGCTATTGACCAGTTTGGTAGGTTACTTGTTGAAGAAAAATTGGATGATATTTACAAAGA 595
Query 567 ATTGAACAGCAAAGAGGGAAAACAACAGAATGCTGCACTTTCACTCTTGGCTTCCATAGT 626
|||||||||||||||||||||||||||| ||||||||||||| | || ||||| || ||
Sbjct 596 ATTGAACAGCAAAGAGGGAAAACAACAGTCTGCTGCACTTTCATTGTTAGCTTCGATTGT 655
Query 627 TAGACGTGGTCCAAGAATGGCATCACATATGGCCAATAAATTTGATTTTAAGGGTTTTGC 686
||||||||||||| ||||||||||| | || || || || ||||||||||||||||||||
Sbjct 656 TAGACGTGGTCCAGGAATGGCATCAGAGATAGCTAAGAAGTTTGATTTTAAGGGTTTTGC 715
Query 687 AAAACTGGGGGAGTATAAAACTGGAGGGG-CTGACAAGGTTAGGAAACATTCAACGAGGC 745
|||||| | |||||||| || | | ||| |||| ||||||| |||||| ||||| |||
Sbjct 716 AAAACTAGCAGAGTATAATAC-GCAAGGGACTGAAAAGGTTAAGAAACACTCAACAAGGA 774
Query 746 AGGCTTTTGTTGGGTTTGCAATATCATTCCTTGAAGTTGGGCAA-CCTC-ATTTGTCA-G 802
|||| |||||||| ||||||||||||||||||||||||||| || ||| ||| || | |
Sbjct 775 AGGCATTTGTTGGATTTGCAATATCATTCCTTGAAGTTGGG-AAGCCTGGATT-GTTAAG 832
Query 803 ATTCTATT-TTATGGCAGAAGAAAATGTATTCTAATGTCCTAAAAGGCCTTGGGGAAGAC 861
| | | | ||| ||||| ||||||| || || ||||| |||||||||| ||||
Sbjct 833 CT-C-AGTGTTAAATAAGAAGGAAATGTACTCGAAAGTCCTGCCAGGCCTTGGGAAAGAT 890
Query 862 GATGAAGACACTGCGGCTTATGTTTTGTCTACGTTGAAGGACAAGATCCTTGTTAAAGA 920
||||| ||||||| ||||| ||| ||||||||||| ||||| |||||||||||| ||||
Sbjct 891 GATGATGACACTGTGGCTTCTGTCTTGTCTACGTTAAAGGATAAGATCCTTGTTGAAGA 949
Score = 185 bits (100), Expect = 4e-45
Identities = 146/168 (87%), Gaps = 4/168 (2%)
Strand=Plus/Plus
Query 7011 GTTGGAATACTTGAAGCAAAGGAATATTGAAGGCAGCATGACAAAA-TCGGAGCACATAC 7069
||| |||||||| ||| |||||||| | |||| ||||||| ||||| || |||||||||
Sbjct 7415 GTTAGAATACTTTAAGAAAAGGAATCTCGAAGACAGCATG-CAAAATTCAGAGCACATAA 7473
Query 7070 TAGGGGAAGTAATCGTATATCTCCAAAAGCTT-CTGTGTACAAACAACATGGTTCTTCTT 7128
||||||||||||| || | |||||| || || ||| |||||||| ||||| ||||||||
Sbjct 7474 TAGGGGAAGTAATTGTGCACCTCCAACAG-TTCCTGAGTACAAACTACATGTTTCTTCTT 7532
Query 7129 CCCTCTGTTGTATTTGCACTTTCTCTCATGCTTCTTCGCAATGGCCTC 7176
||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 7533 CCCTCTGTTGTATTTGCACTTTCTCTCATGCTTCTTCACAATGACCTC 7580
Score = 174 bits (94), Expect = 1e-41
Identities = 139/160 (87%), Gaps = 5/160 (3%)
Strand=Plus/Plus
Query 5849 ACTCATTGTCCATGGGATGTATTGAACCTGTAAAATTCGCCAG-TTCAGGCTTGCTTGCA 5907
||||||||||| |||| | ||||||||||| |||||||||| || |||||||||||||
Sbjct 6023 ACTCATTGTCC-TGGGTTACATTGAACCTGTGGAATTCGCCAGCTT-AGGCTTGCTTGCA 6080
Query 5908 GTTGCGTTAGCGAGCACGTCTTCAGCAGATCTTGGGATGAGAAAATTGGGCTATGAAACT 5967
||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 6081 GTTGCATTTGTGAGCATGTCTTCAGCAGATCTTGGGATGAGAAAATTGGGCTATGAAACT 6140
Query 5968 CTTGGGATATTTGTGCATGCCCTTAAGAGATGTGAGAAGA 6007
||| |||||| || |||||||| |||||| || ||||
Sbjct 6141 CTTCAAATATTTCTGGATGCCCTT--GAGATGGGAAAAGA 6178
> AT1G62740.1 | Symbols: Hop2 | stress-inducible protein, putative
| chr1:23230956-23233543 FORWARD LENGTH=1949
Length=1949
Score = 150 bits (81), Expect = 2e-34
Identities = 102/112 (91%), Gaps = 2/112 (2%)
Strand=Plus/Plus
Query 27 GATGGTGGCAAAAGCTTTGACTAGGAAAGGAACTGCTTTGGGGAAGATGGCTAAA-TGCT 85
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | ||
Sbjct 1015 GATGGTGGCTAAAGCTTTGACTAGGAAAGGAACTGCTTTAGGGAAGATGGCTAAAGT-CT 1073
Query 86 CTAAAGGCTATGAACCTGTGATAGAGACTTACCAGGAAGCTCTTGCGGAGCA 137
| |||| ||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 1074 CGAAAGACTATGAACCTGTGATTCAGACTTACCAGAAAGCTCTTACGGAGCA 1125
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 374145123883
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5