BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg337406 Length=1053 Score E Sequences producing significant alignments: (Bits) Value AT1G52540.1 | Symbols: | Protein kinase superfamily protein | ... 1712 0.0 > AT1G52540.1 | Symbols: | Protein kinase superfamily protein | chr1:19570058-19572204 REVERSE LENGTH=1613 Length=1613 Score = 1712 bits (927), Expect = 0.0 Identities = 1007/1047 (96%), Gaps = 0/1047 (0%) Strand=Plus/Plus Query 1 ATGCAAATTTTTAGTTGCTTCTGCTGTGGAAAAGGATTTGATCGGCAAAAGAAGGTGAAA 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 321 ATGCAAATTTTTAGTTGTTTCTGCTGTGGAAAAGGATTTGATCGGCAAAAGAAGGTGAAA 380 Query 61 ACGGAGCCATCATGGAGGATTTTTTCACTGAAAGAACTTCACGCAGCCACAAACAGTTTT 120 ||||||||||| |||||||| |||||||| || |||||||||||||| |||||||||||| Sbjct 381 ACGGAGCCATCGTGGAGGATCTTTTCACTCAAGGAACTTCACGCAGCAACAAACAGTTTT 440 Query 121 AATTACGACAACAAGCTCGGTGAAGGCCGATTTGGAAGTGTGTATTGGGGTCAGCTATGG 180 |||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 441 AATTACGATAACAAGCTCGGTGAAGGCAGATTTGGCAGTGTGTATTGGGGTCAGCTATGG 500 Query 181 GATGGATCTCAAATTGCAGTCAAGAGACTGAAGGCTTGGAGTAGCAGAGAAGATATAGAT 240 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| Sbjct 501 GATGGATCTCAAATTGCAGTCAAGAGATTGAAGGCATGGAGTAGCAGAGAAGAGATAGAT 560 Query 241 TTTGCTGTAGAAGTCGAGATTCTTGCTCGTATCCGTCACAAGAATCTATTGAGTGTTCGA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 561 TTTGCTGTAGAAGTCGAGATTCTTGCTCGTATCCGTCACAAGAATCTATTGAGTGTACGA 620 Query 301 GGTTACTGTGCGGAAGGACAAGAACGACTCATTGTATATGACTACATGCCAAATTTGAGC 360 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 621 GGTTACTGTGCAGAAGGACAAGAACGACTCATTGTATATGATTACATGCCAAATTTGAGC 680 Query 361 TTGGTCTCTCATCTTCATGGTCAGCATTCATCTGAGTCGCTTCTTGATTGGACCAGGCGG 420 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 681 TTGGTCTCTCATCTTCATGGTCAACATTCATCTGAGTCGCTTCTTGATTGGACTAGGCGG 740 Query 421 ATGAATATTGCTGTAACCTCTGCTCAGGCGATTGCCTACTTACATCATTTTGCAACACCC 480 ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct 741 ATGAATATTGCTGTATCTTCTGCTCAGGCGATTGCCTACTTGCATCATTTTGCAACACCT 800 Query 481 CGAATAGTCCATGGAGATGTGAGAGCAAGCAATGTGCTCCTTGATTCTGAGTTTGAAGCT 540 ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 801 AGAATAGTCCATGGAGATGTGAGAGCAAGCAATGTGCTGCTAGATTCTGAGTTTGAAGCT 860 Query 541 CGGGTTACAGATTTCGGATACGATAAGCTGATGCCAGATGATGGAGCTAACAAAAGTACC 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 861 CGGGTTACAGATTTCGGATACGATAAGCTGATGCCAGATGATGGAGCTAACAAAAGCACC 920 Query 601 AAGGGTAATAACAATGGGTATCTCTCACCAGAATGTATCGAATCTGGAAAAGAATCAGAC 660 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 921 AAGGGTAATAACATTGGGTATCTCTCACCAGAATGTATCGAATCTGGAAAAGAATCAGAC 980 Query 661 ATGGGAGATGTGTATAGTTTCGGTGTTCTTTTGCTGGAGCTTGTAACTGGTAAGAGACCT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 981 ATGGGAGATGTGTATAGTTTCGGTGTTCTTTTGCTGGAGCTTGTAACTGGTAAGAGACCT 1040 Query 721 ACTGAAAGGGTAAACTTAACAACAAAGCGGGGTATTACCGAATGGGTTTTACCTCTTGTA 780 || || ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1041 ACAGAGAGGGTAAACTTAACAACAAAGAGGGGTATTACCGAATGGGTTTTACCTCTTGTT 1100 Query 781 TACGAAAGAAAGTTTGGTGAAATTGTCGATCAAAGGCTGAATGGGAAGTATGTGGAAGAG 840 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1101 TACGAAAGAAAGTTTGGTGAAATTGTGGATCAAAGGCTGAATGGGAAGTATGTGGAAGAA 1160 Query 841 GAGCTGAAAAGGGTAGTTTTGGTTGGTCTCATGTGTGCTCAGAGGGAGCCAGAGAAGAGA 900 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1161 GAGCTGAAAAGGATAGTTTTGGTTGGTCTCATGTGTGCTCAGAGGGAGTCAGAGAAGAGA 1220 Query 901 CCAACAATGTCTGAAGTTGTGGAGATGCTAATGAATGAATCAAAGGAGAAAATGGCTCAG 960 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1221 CCAACAATGTCTGAAGTTGTGGAGATGCTAATGATTGAATCAAAGGAGAAAATGGCTCAG 1280 Query 961 CTTGAAGCTAATCCACTCTTCAATGAAAACAATGAAGGGGAAGTTATAGATGAAAGCTCA 1020 ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| Sbjct 1281 CTTGAAGCTAATCCACTCTTCAATGGAAACAATGATGGTGAAGTTATAGATGAAAGCTCA 1340 Query 1021 GAGATCATTTCAGAAGAGAGAGATCAT 1047 ||||||||||| |||| |||||||||| Sbjct 1341 GAGATCATTTCTGAAGTGAGAGATCAT 1367 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51640703116 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5