BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg339394 Length=564 Score E Sequences producing significant alignments: (Bits) Value AT1G71750.2 | Symbols: HGPT | Hypoxanthine-guanine phosphoribos... 612 1e-174 > AT1G71750.2 | Symbols: HGPT | Hypoxanthine-guanine phosphoribosyltransferase | chr1:26987775-26989199 REVERSE LENGTH=831 Length=831 Score = 612 bits (331), Expect = 1e-174 Identities = 426/471 (90%), Gaps = 9/471 (2%) Strand=Plus/Plus Query 1 ATGGCGCAAGAGAAGCACATAGAGAAGGTGCTTTTCAGCGATGAAGTAATCGCTG-AGCG 59 |||||| ||||||||||||||||||||| || ||||||||||||||||| || | | || Sbjct 56 ATGGCGTTAGAGAAGCACATAGAGAAGGTACTCTTCAGCGATGAAGTAATTGC-GCACCG 114 Query 60 TGTTG-GTCAACTTGG-ATCTGAGATTACTTCTGATTTCTCCGGTGACTC---GGAATCG 114 | || ||| ||||| ||| || |||||||||||||||||||||||||| |||| | Sbjct 115 -GGTGAATCAGCTTGGAATC-GATATTACTTCTGATTTCTCCGGTGACTCGGAGGAAACT 172 Query 115 CCTGTTTTCGTCGGCGTAGCCACCGGTGCTTGCCTTTTCTTGGCCGATCTCGTTAGGCGA 174 ||| |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 173 CCTATTTTTGTCGGCGTAGCCACTGGTGCTTGCCTCTTCTTGGCCGATCTCGTTAGGCGA 232 Query 175 ATTGACTTGCCCATCGCTATTGATTACATCAGAGCTGAGTCTTACGGCTCTGGTACTGTA 234 ||||||||||| || ||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct 233 ATTGACTTGCCAATAGCTATAGATTTCATTAGAGCTGAGTCTTACGGCTCTGGTACTGTA 292 Query 235 TCCAATGGACTTCCCAGAATATCGTTTGACTTAAAGCTTGACATCACGAACAAGCACGTT 294 |||| |||| |||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 293 TCCAGTGGAGTTCCCAGAGTATCATTTGACTTAAAGCTTGACATCACGAACAAGCACGTT 352 Query 295 GTCTTGGTCGAGGACATTGTGGATACTGGCAATACACTTAGCTGCCTGATTGAGCACCTA 354 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 353 GTCTTGGTCGAGGACATTGTGGATACTGGCAATACACTTAGCTGCCTGATTGAGCACATG 412 Query 355 AAATTGAAAAAGGCATCATCTGTTTCGGTTTGTACTCTCCTCGACAAGCCATCGAGAAGA 414 ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 413 AAAGCAAAAAAGGCGTCATCTGTTTCGGTTTGCACTCTCCTCGACAAGCCATCGAGAAGA 472 Query 415 AAGGTTCATTTTAAGCTGTTTGGGAATGGGAAATTCTACAGTGGTTTTGAA 465 |||||||||| ||||||| |||| || |||||||||||||||||||||||| Sbjct 473 AAGGTTCATTATAAGCTGGTTGGAAAGGGGAAATTCTACAGTGGTTTTGAA 523 Score = 163 bits (88), Expect = 2e-39 Identities = 94/97 (97%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 466 TGTCCAGATGAATTTGTTGTGGGCTATGGCATGGACTTTGCAGAGCAATACCGCAACCTA 525 ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| Sbjct 554 TGTCCAGATGAATTTGTCGTGGGCTATGGCATGGATTTTGCAGAACAATACCGCAACCTA 613 Query 526 TCTTACATTGGCGTATTGAAGCCTGAATATTACATGT 562 ||||||||||||||||||||||||||||||||||||| Sbjct 614 TCTTACATTGGCGTATTGAAGCCTGAATATTACATGT 650 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27076205233 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5