BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg339747 Length=453 Score E Sequences producing significant alignments: (Bits) Value AT1G75690.1 | Symbols: | DnaJ/Hsp40 cysteine-rich domain super... 632 0.0 > AT1G75690.1 | Symbols: | DnaJ/Hsp40 cysteine-rich domain superfamily protein | chr1:28422110-28423285 REVERSE LENGTH=743 Length=743 Score = 632 bits (342), Expect = 0.0 Identities = 429/468 (92%), Gaps = 18/468 (4%) Strand=Plus/Plus Query 1 ATGCCAGTTTCAGCTCCATCTCCGCCTCGTCTTCTTCAATCTCCGTTCATTCACCGTCCA 60 ||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||| Sbjct 116 ATGCCAGTTTCAGCTCCATCTCCGCCTCG---TCTTCATTCTCCGTTCATTCACTGTCCC 172 Query 61 ATCAATTTCACTCCGTCTTC-TT-TC--C--GG--TCGCC-G--G-C-T--ACCTCTTAT 105 |||||||||||||| ||||| || || | || || || | | | | || |||||| Sbjct 173 ATCAATTTCACTCCTTCTTCTTTCTCGGCGAGGAATCTCCGGTCGCCGTCAACATCTTAT 232 Query 106 CCCCGAATCAAAGCTGAACTCGATCCCAACACGGTAGTCGCAATATCAGTTGGTGTAGCA 165 ||||||||||||||||||||||||||||||||||||||||| ||||| || || |||||| Sbjct 233 CCCCGAATCAAAGCTGAACTCGATCCCAACACGGTAGTCGCGATATCTGTAGGCGTAGCA 292 Query 166 AGCGTCGCATTAGGAATCGGAATCCCTGTGTTCTACGAGACACAAATCGAAAATGCCGCT 225 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct 293 AGCGTCGCATTAGGAATCGGAATCCCTGTGTTCTACGAGACTCAAATCGACAATGCGGCT 352 Query 226 AAGCGAGAGAATACTCAACCTTGTTTTCCCTGTAACGGTACCGGAGCTCAGAAATGCAGA 285 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 353 AAGCGAGAGAATACTCAACCTTGTTTTCCCTGTAATGGCACCGGAGCTCAGAAATGCAGA 412 Query 286 TTGTGTGTGGGAAGTGGTAATGTGACCGTAGAGCTTGGTGGAGGAGAGAAACAAGTATCC 345 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 413 TTGTGTGTGGGAAGTGGTAATGTGACCGTAGAGCTTGGTGGAGGAGAGAAAGAAGTCTCA 472 Query 346 AACTGCATTAACTGTGATGGTGCTGGTTCCTTGACTTGCACTACTTGTCAAGGCTCTGGT 405 ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 473 AACTGTATCAACTGTGATGGTGCTGGTTCCTTAACTTGCACTACTTGTCAAGGCTCTGGT 532 Query 406 GTTCAACCTCGATACCTTGATCGAAGGGAGTTCAAGGACGATGACTAA 453 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 533 GTTCAACCTCGATACCTTGATCGAAGGGAGTTCAAGGACGATGACTAA 580 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21564864321 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5