BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg341309
Length=3168
Score E
Sequences producing significant alignments: (Bits) Value
AT3G11890.2 | Symbols: | Sterile alpha motif (SAM) domain-cont... 1188 0.0
AT3G11880.1 | Symbols: | Protein of unknown function DUF2359, ... 1057 0.0
AT1G70770.1 | Symbols: | Protein of unknown function DUF2359, ... 680 0.0
AT3G11860.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 453 5e-126
> AT3G11890.2 | Symbols: | Sterile alpha motif (SAM) domain-containing
protein | chr3:3755542-3757775 FORWARD LENGTH=1815
Length=1815
Score = 1188 bits (643), Expect = 0.0
Identities = 1153/1384 (83%), Gaps = 96/1384 (7%)
Strand=Plus/Plus
Query 1812 AACTTCTCAATTAGAAGCTGAGTTAAGAGAAAGC-ATGGAGGATACGCAAGAAAGTACTT 1870
|||| |||||| | ||||||||||||||| | || | | |||||| || | |||
Sbjct 335 AACTCCTCAATCACAAGCTGAGTTAAGAG-ACGCTCTTGCGGATACACACTTTACCACTC 393
Query 1871 TTCTTCACAC--T-GTGGTACCTGCTCTTCCTCTGCCTGAACATTTCATTATGCACAAGC 1927
| ||| ||| | |||||||||||||||||||| |||||||| |||||| |||||||||
Sbjct 394 CTGTTCCCACTGTGGTGGTACCTGCTCTTCCTCTACCTGAACAATTCATTTTGCACAAGC 453
Query 1928 CTGAAAATTCTGAGTCTCAAGCTGAGTTAAGAGACGT-TCTTGCGGATACGCACAAAACT 1986
|||||| |||| | || |||| | |||| ||||| | | ||||| ||||||| |||
Sbjct 454 CTGAAACTTCTCATTCGCAAGTTCAGTTCAGAGA-TTGTATTGCGAATACGCA-TAAA-- 509
Query 1987 ACTACTCCTGTTCCCACTGTGGTGGTACCTACTCCTCTTCAAACTGGGATGTCTCCTC-T 2045
||||||||| ||| ||| ||||| | | | ||| || |||| | | | ||| | |
Sbjct 510 ACTACTCCTCTTCACACAGTGGT-G--CATTCTCTTCCGGTAACT-GAACAT-TCCACTT 564
Query 2046 T-CTATTA-CCTGAACA-CTTCGTTTTGCAGAAGCCTGCAACTTCTCA-A-TCACA-AGC 2099
| | | | ||| ||| |||| | || ||| || | || | | || | ||
Sbjct 565 TGC-AGAAGCCT--ACATCTTCCCAGT-CACAAG-TTG--AGTTAAGAGAGTC-TATTGC 616
Query 2100 GGATACGCACGAAACTACTCTTCTTCAGACAGTGATACCTTCTC-CCCCTGTACCTGACC 2158
|||||| || | |||||||| |||||| |||| ||| |||||| || | ||||| | |
Sbjct 617 GGATACTCATGGAACTACTCCTCTTCAAACAGAGATTTCTTCTCTTCCAT-TACCTCAAC 675
Query 2159 A-TTACAG-TCTGCAGAAGCCTGCAGCTTCT-AGATCACAAGCTGAGTTAAGAATGAAGA 2215
| || | | | |||||||||| ||| ||||| | ||||||||| | | || | |
Sbjct 676 ACTT-C-GTTTTGCAGAAGCCCGCAACTTCTCA-ATCACAAGC---G----G-AT--ACA 722
Query 2216 TAAGCAAAGCTACTCTTGTTCACACAGCGA-TGCCTTCTCTTCCTGTACCTGAACAT-TG 2273
| | ||| |||||||| |||||||| | |||||||||||||||||||||||| | ||
Sbjct 723 CACG-AAA-CTACTCTTCTTCACACA-ATACTGCCTTCTCTTCCTGTACCTGAAC-TATG 778
Query 2274 CACTTTGCAGGAGCCTACAACTTCTAAATCACAAGCTGAGTTAAGAACGGAA-ACACACA 2332
||||||||| ||||| |||||||| |||||||||||||||||||| | ||| || | ||
Sbjct 779 TACTTTGCAGAAGCCTGCAACTTCTCAATCACAAGCTGAGTTAAGAGC-GAATACGCGCA 837
Query 2333 AAGCTATTCTTGTTCA--CA-CAGTGATGCCTTCTCTTCCTGTACCTGAACATTACAGTC 2389
|||||| ||||||||| || ||| |||||||||||||||||||||||||||||||||||
Sbjct 838 AAGCTACTCTTGTTCACGCAGCAGCGATGCCTTCTCTTCCTGTACCTGAACATTACAGTC 897
Query 2390 TGCGGAAGCCTGCAACTTCTCAATCACAAGCTGAGTTAAGATTGGAGACACGCAAAGCTA 2449
| | ||||||| ||||||||||||||||||||||||||||| | |||| ||||||||||
Sbjct 898 TACAGAAGCCTTCAACTTCTCAATCACAAGCTGAGTTAAGAGCGAAGACGCGCAAAGCTA 957
Query 2450 CTCTTTTTCA--CA-CAGCGATGCCTTCTCTTCCTGTACCTGAACATTATAGTATACAGA 2506
||||| |||| || ||||||| |||||||||||||||||||||||||| ||| ||| |
Sbjct 958 CTCTTGTTCACGCAGCAGCGATACCTTCTCTTCCTGTACCTGAACATTACAGTCTACTCA 1017
Query 2507 AGCCTTCAACTTCTCAATCACAAGCTGAGTTAAGAGCGGAT-ACGCGCAAAGCTACTCTT 2565
||||||||||||||||||||||||||||| ||||| | | | || | ||||||||| | |
Sbjct 1018 AGCCTTCAACTTCTCAATCACAAGCTGAGGTAAGAAC-GTTGACACACAAAGCTACCCAT 1076
Query 2566 GTTCACACAGTGGTGCCTTCCCTTCCTGTAACTGAACATTGCACTTTGCAGAAGCCTGCA 2625
|||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1077 GTTCACACAGCGATGCCTTCCCTTTCTGTAACTGAACATTGCACTTTGCAGAAGCCTGCA 1136
Query 2626 ACTTCTCAATCACAAGCTGAGCTGAGAGACCTGGTTGTGGATACCCACGAAGCTAGTCGT 2685
||||||||||| |||||||| | | | | || ||| | | | || || || |
Sbjct 1137 ACTTCTCAATCGCAAGCTGA----A-A--C-TAGTCGTGT-T-C--A--AA-CT-GT-G- 1178
Query 2686 GTTCACACTGTGGAACCTGAGGCTTATCCTGATTTCACCTCAGTAGACAAACCGGAGATA 2745
| || ||| || |||| | |||||||||||||||||||||||||||||||||
Sbjct 1179 GA--AC-CTGAGG--CCTG----T---CCTGATTTCACCTCAGTAGACAAACCGGAGATA 1226
Query 2746 GTTATGAGTCGCAGTCTCACAACCAGGAAAGCTCCAGCACCAAAGAGATCACTTCAAGAT 2805
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1227 GTTATGAGTCGCAGTCTCACAACCAGGAAAGCTCCAGCACCAAAGAGATCACTGCAAGAA 1286
Query 2806 TGTAG-AATGAATCAGGATAGAAGAGTGGAGGTTCACAGGAGACGTGCGGGTCACAAGCC 2864
|||| || |||||||||||||||||||||| | |||||||| |||||||||||||||||
Sbjct 1287 AGTAGGAA-GAATCAGGATAGAAGAGTGGAGATCCACAGGAGGCGTGCGGGTCACAAGCC 1345
Query 2865 CATAAGGTTTCCTAGAGTGATGTGCAGCTCTGTAGTTATTGATAATGAGAAGCTGAGAGT 2924
|||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct 1346 CATAAGGTTTCCAAGAGTGATGTGTAGCTCTGTTGTTATGGATAATGAGAAGCTGAGAGT 1405
Query 2925 GTTGAATCTAGAGAAGAAGGTTGAGAAAGCGGGTGGGTTGCACGAATGGGTTGGATCTAT 2984
||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 1406 GTTGAATCTGGAGAAGAAGGTTGAGAAAGCGGGAGGGTTGAACGAATGGGTTGGATCTAT 1465
Query 2985 AGGATTAGGGAGAGAGTTTGAGAGGATGTTGAGAGGACAGAAGATGAGTAAGTTTCAGAT 3044
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1466 AGGATTAGGGAGAGAGTTTGAGAGGATGTTGAGAGGACAGAGGATGAGTAAGTTTCAGAT 1525
Query 3045 GGCGAATTTGACCATGGAGAAGCTTAAGCAGATGGGTGCTTTAGCCGTTGGGCCAAGAAG 3104
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1526 GGCGAATTTGACAATGGAGAAGCTTAAGCAGATGGGTGCTTTAGCCGTTGGGCCAAGAAG 1585
Query 3105 AAAGCTTATACATGCAATTGGTTGTGTCTATCACCCACATTGTCTACGTGCTTCCTTTAA 3164
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1586 AAAGCTTATACATGCAATAGGTTGTGTCTATCACCCACATTGTCTACGTGCTTCCTTTAA 1645
Query 3165 CTGA 3168
||||
Sbjct 1646 CTGA 1649
Score = 739 bits (400), Expect = 0.0
Identities = 844/1044 (81%), Gaps = 88/1044 (8%)
Strand=Plus/Plus
Query 1635 GGTTATAATGGCGAAGCTAAGGCCTAGACAGTTGGAACTGAGCAAGACTGTTCCTTCCAA 1694
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59 GGTTACAATGGCGAAGCTAAGGCCTAGACAGTTGGAACTGAGCAAGACTGTTCCTTCCAA 118
Query 1695 GTTAGGTTTTGATGGAGAAGAAGACGCTTGGGTCTTTGTTAAAAAGCAGAGAATCATCAT 1754
||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 119 GTTGGGTTTTGATGGAGAAGAAGACGCTTGGGTCTTTGTTAAAAAGCAGAAAATCTTCAT 178
Query 1755 TGTTTTGCCTTCTCTTCCACTACCTGAACAACATC-T--CACTATGGAGAAACCTGCAAT 1811
||| ||||||||||||||||| ||| ||||||| | | |||| ||||||||||||||||
Sbjct 179 TGTCTTGCCTTCTCTTCCACTTCCTCAACAACAGCATTTCACTTTGGAGAAACCTGCAAT 238
Query 1812 AACTTCTCAATTAGAAGCTGAGTTAAGAGAAAGCATGGAGGATACGCAAGAAAGTACTTT 1871
| || ||||||||||||||| ||| |||||||||||||||| ||||||||| ||||| ||
Sbjct 239 ATCTCCTCAATTAGAAGCTGGGTTTAGAGAAAGCATGGAGGTTACGCAAGATAGTACCTT 298
Query 1872 TCTTCACACTGTGGTACCTGCTCTTCCTCTGCCTGAACATTTCATTATGCACAAGCCTGA 1931
| ||||||||||||| ||| ||||||||||||||||| | | | | | | |
Sbjct 299 TGTTCACACTGTGGTGCCTTCTCTTCCTCTGCCTGAA-A---C-T----C-CT--C---A 343
Query 1932 AAATTCTGAGTCTCAAGCTGAGTTAAGAGACGTTCTTGCGGATACGCACAAAACTACTAC 1991
| | | | | |||||||||||||||||| |||||||||||| ||| || | ||
Sbjct 344 A--T-C--A--C--AAGCTGAGTTAAGAGACGCTCTTGCGGATACACACTTTAC--C-AC 391
Query 1992 TCCTGTTCCCACTGTGGTGGTACCTACTCCTCTTCAAACTGGG-ATGTCTCCTCTT-CTA 2049
||||||||||||||||||||||||| ||| || || | ||| | | || | || | |
Sbjct 392 TCCTGTTCCCACTGTGGTGGTACCTGCTCTTCCTCTACCTGAACAA-T-TCATTTTGC-A 448
Query 2050 TTA-CCTGAACACTTCGTT-TT-GCAGAAGCCTGCAACTTCTCA-ATCACAA-GCGGATA 2104
| |||||| ||||| | || ||| | | | || ||| | || | ||| |||
Sbjct 449 CAAGCCTGAA-ACTTC-TCATTCGCA-A-GT-T-CAG-TTCAGAGATTGTATTGCGAATA 501
Query 2105 CGCACGAAACTACTCTTCTTCAGACAGTGATACCTTCTCCCCCTGTACCTGACCATTACA 2164
|||| ||||||||| |||||| |||||| | | ||||| || ||| |||| |||| ||
Sbjct 502 CGCATAAAACTACTCCTCTTCACACAGTGGTGCATTCTCTTCCGGTAACTGAACATTCCA 561
Query 2165 GTCTGCAGAAGCCTGCAGCTTCT-AGATCACAAGCTGAGTTAAGA-A-TGAA--G---AT 2216
| ||||||||||| || |||| || ||||||| |||||||||| | | | | ||
Sbjct 562 CTTTGCAGAAGCCTACATCTTCCCAG-TCACAAGTTGAGTTAAGAGAGTCTATTGCGGAT 620
Query 2217 AAGCA---AAGCTACTCTTGTTCACACAGCGATGCCTTCTCTTCC-TGTACCTGAACA-T 2271
| || || |||||| | |||| |||| ||| |||||||||| | ||||| |||| |
Sbjct 621 ACTCATGGAA-CTACTCCTCTTCAAACAGAGATTTCTTCTCTTCCAT-TACCTCAACACT 678
Query 2272 TGCACTTTGCAGGAGCCTACAACTTCTAAATCACAAGCTGAGTTAAGAACGGAAACACAC 2331
| | ||||||| |||| |||||||| |||||||||| || | | | | |||
Sbjct 679 T-CGTTTTGCAGAAGCCCGCAACTTCTCAATCACAAGCGGA-T-A----C--A--CACG- 726
Query 2332 AAAGCTATTCTTGTTCACACAGTGA-TGCCTTCTCTTCCTGTACCTGAAC-AT-TACAGT 2388
||| ||| |||| |||||||| | | |||||||||||||||||||||||| || ||| |
Sbjct 727 AAA-CTACTCTTCTTCACACAAT-ACTGCCTTCTCTTCCTGTACCTGAACTATGTACT-T 783
Query 2389 CTGCGGAAGCCTGCAACTTCTCAATCACAAGCTGAGTTAAGATTGGAGACACGCAAAGCT 2448
||| ||||||||||||||||||||||||||||||||||||| | | || |||||||||
Sbjct 784 -TGCAGAAGCCTGCAACTTCTCAATCACAAGCTGAGTTAAGAGCGAATACGCGCAAAGCT 842
Query 2449 ACTCTTTTTCAC--A-CAGCGATGCCTTCTCTTCCTGTACCTGAACATTATAGTATACAG 2505
|||||| ||||| | |||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 843 ACTCTTGTTCACGCAGCAGCGATGCCTTCTCTTCCTGTACCTGAACATTACAGTCTACAG 902
Query 2506 AAGCCTTCAACTTCTCAATCACAAGCTGAGTTAAGAGCGGATACGCGCAAAGCTACTCTT 2565
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 903 AAGCCTTCAACTTCTCAATCACAAGCTGAGTTAAGAGCGAAGACGCGCAAAGCTACTCTT 962
Query 2566 GTTCACACAGT-G-G-TGCCTTCCCTTCCTGTAACTGAACATTGCACTTTGCAGAAGCCT 2622
|||||| ||| | | | ||||| ||||||||| ||||||||| || | | | ||||||
Sbjct 963 GTTCACGCAGCAGCGATACCTTCTCTTCCTGTACCTGAACATTACAGTCTACTCAAGCCT 1022
Query 2623 GCAACTTCTCAATCACAAGCTGAG 2646
|||||||||||||||||||||||
Sbjct 1023 TCAACTTCTCAATCACAAGCTGAG 1046
Score = 556 bits (301), Expect = 3e-157
Identities = 457/531 (86%), Gaps = 16/531 (3%)
Strand=Plus/Plus
Query 2015 CTACTCCTCTTCAAACTGGGATGTCTCCTCTTCTATTACCTGAACACTTCGTTTTGCAGA 2074
|||||||||||||||| | ||| ||| |||||| ||||||| ||||||||||||||||||
Sbjct 631 CTACTCCTCTTCAAACAGAGATTTCTTCTCTTCCATTACCTCAACACTTCGTTTTGCAGA 690
Query 2075 AGCCTGCAACTTCTCAATCACAAGCGGATACGCACGAAACTACTCTTCTTCAGACAGTGA 2134
|||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| | |
Sbjct 691 AGCCCGCAACTTCTCAATCACAAGCGGATACACACGAAACTACTCTTCTTCACACAAT-A 749
Query 2135 -TACCTTCTCCCCCTGTACCTG-ACCAT-TACAGTCTGCAGAAGCCTGCAGCTTCT-AGA 2190
| ||||||| |||||||||| || || ||| | |||||||||||||| ||||| | |
Sbjct 750 CTGCCTTCTCTTCCTGTACCTGAACTATGTAC--TTTGCAGAAGCCTGCAACTTCTCA-A 806
Query 2191 TCACAAGCTGAGTTAAGAATGAAGATAAGCAAAGCTACTCTTGTTCA--CA-CAGCGATG 2247
|||||||||||||||||| ||| | ||||||||||||||||||| || ||||||||
Sbjct 807 TCACAAGCTGAGTTAAGAGCGAATACGCGCAAAGCTACTCTTGTTCACGCAGCAGCGATG 866
Query 2248 CCTTCTCTTCCTGTACCTGAACATTGCACTTTGCAGGAGCCTACAACTTCTAAATCACAA 2307
||||||||||||||||||||||||| || | | ||| ||||| |||||||| ||||||||
Sbjct 867 CCTTCTCTTCCTGTACCTGAACATTACAGTCTACAGAAGCCTTCAACTTCTCAATCACAA 926
Query 2308 GCTGAGTTAAGAACGGAA-ACACACAAAGCTATTCTTGTTCAC--A-CAGTGATGCCTTC 2363
|||||||||||| || || || | |||||||| |||||||||| | ||| ||| |||||
Sbjct 927 GCTGAGTTAAGAGCG-AAGACGCGCAAAGCTACTCTTGTTCACGCAGCAGCGATACCTTC 985
Query 2364 TCTTCCTGTACCTGAACATTACAGTCTGCGGAAGCCTGCAACTTCTCAATCACAAGCTGA 2423
||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||
Sbjct 986 TCTTCCTGTACCTGAACATTACAGTCTACTCAAGCCTTCAACTTCTCAATCACAAGCTGA 1045
Query 2424 GTTAAGATTGGAGACACGCAAAGCTACTCTTTTTCACACAGCGATGCCTTCTCTTCCTGT 2483
| ||||| | ||||| ||||||||| | | ||||||||||||||||||| ||| ||||
Sbjct 1046 GGTAAGAACGTTGACACACAAAGCTACCCATGTTCACACAGCGATGCCTTCCCTTTCTGT 1105
Query 2484 ACCTGAACATTATAGTATACAGAAGCCTTCAACTTCTCAATCACAAGCTGA 2534
| ||||||||| | | | ||||||||| ||||||||||||| ||||||||
Sbjct 1106 AACTGAACATTGCACTTTGCAGAAGCCTGCAACTTCTCAATCGCAAGCTGA 1156
Score = 333 bits (180), Expect = 6e-90
Identities = 314/376 (84%), Gaps = 20/376 (5%)
Strand=Plus/Plus
Query 2067 TTTGCAGAAGCCTGCAACTTCTCAATCACAAGCGGA-T-ACG--C-A---CG---AAA-C 2114
||||||||||||||||||||||||||||||||| || | | | | | || ||| |
Sbjct 782 TTTGCAGAAGCCTGCAACTTCTCAATCACAAGCTGAGTTAAGAGCGAATACGCGCAAAGC 841
Query 2115 TACTCTTCTTCA-G-A-CAGTGATACCTTCTCCCCCTGTACCTGACCATTACAGTCTGCA 2171
||||||| |||| | | ||| ||| ||||||| ||||||||||| ||||||||||| ||
Sbjct 842 TACTCTTGTTCACGCAGCAGCGATGCCTTCTCTTCCTGTACCTGAACATTACAGTCTACA 901
Query 2172 GAAGCCTGCAGCTTCT-AGATCACAAGCTGAGTTAAGAATGAAGATAAGCAAAGCTACTC 2230
||||||| || ||||| | ||||||||||||||||||| ||||| ||||||||||||
Sbjct 902 GAAGCCTTCAACTTCTCA-ATCACAAGCTGAGTTAAGAGCGAAGACGCGCAAAGCTACTC 960
Query 2231 TTGTTCAC--A-CAGCGATGCCTTCTCTTCCTGTACCTGAACATTGCACTTTGCAGGAGC 2287
|||||||| | ||||||| ||||||||||||||||||||||||| || | | | |||
Sbjct 961 TTGTTCACGCAGCAGCGATACCTTCTCTTCCTGTACCTGAACATTACAGTCTACTCAAGC 1020
Query 2288 CTACAACTTCTAAATCACAAGCTGAGTTAAGAACGGAAACACACAAAGCTATTCTTGTTC 2347
|| |||||||| |||||||||||||| |||||||| ||||||||||||| | |||||
Sbjct 1021 CTTCAACTTCTCAATCACAAGCTGAGGTAAGAACGTTGACACACAAAGCTACCCATGTTC 1080
Query 2348 ACACAGTGATGCCTTCTCTTCCTGTACCTGAACATTACAGTCTGCGGAAGCCTGCAACTT 2407
|||||| ||||||||| ||| ||||| ||||||||| || | ||| ||||||||||||||
Sbjct 1081 ACACAGCGATGCCTTCCCTTTCTGTAACTGAACATTGCACTTTGCAGAAGCCTGCAACTT 1140
Query 2408 CTCAATCACAAGCTGA 2423
||||||| ||||||||
Sbjct 1141 CTCAATCGCAAGCTGA 1156
Score = 320 bits (173), Expect = 5e-86
Identities = 434/552 (79%), Gaps = 49/552 (9%)
Strand=Plus/Plus
Query 2131 GTGATACCTTCTCCCCCTGTACCTG-ACCATTACAGTCTGCAGAAGCCTGCAGCTTCTAG 2189
||| ||||| ||| ||| |||||| || ||| || | |||| ||||||| | |||||
Sbjct 408 GTGGTACCTGCTCTTCCTCTACCTGAACAATT-CATTTTGCACAAGCCTGAAACTTCT-C 465
Query 2190 A-TCACAAGCTGAGTT-A-AGAATG-A---AG-ATAAGC--AAAGCTACTCTTGTTCACA 2239
| || |||| | |||| | ||| || | | ||| || ||| |||||| | ||||||
Sbjct 466 ATTCGCAAGTTCAGTTCAGAGATTGTATTGCGAATACGCATAAAACTACTCCTCTTCACA 525
Query 2240 CAGCGATGCCTTCTCTTCCTGTACCTGAACATTGCACTTTGCAGGAGCCTACAACTTCTA 2299
||| | ||| ||||||||| ||| ||||||||| |||||||||| |||||||| ||||
Sbjct 526 CAGTGGTGCATTCTCTTCCGGTAACTGAACATTCCACTTTGCAGAAGCCTACATCTTCCC 585
Query 2300 AATCACAAGCTGAGTT-A-AGA----A---CGGAAACACA-CAAAGCTATTCTTGTTCAC 2349
| ||||||| |||||| | ||| | |||| || || || ||| || | ||||
Sbjct 586 AGTCACAAGTTGAGTTAAGAGAGTCTATTGCGGATACTCATGGAA-CTACTCCTCTTCAA 644
Query 2350 ACAGTGATGCCTTCTCTTCC-TGTACCTGAACA-TTACAG-TCTGCGGAAGCCTGCAACT 2406
|||| ||| |||||||||| | ||||| |||| || | | | ||| |||||| ||||||
Sbjct 645 ACAGAGATTTCTTCTCTTCCAT-TACCTCAACACTT-C-GTTTTGCAGAAGCCCGCAACT 701
Query 2407 TCTCAATCACAAGCTGAGTTAAGATTGGAGACACGCAAAGCTACTCTTTTTCACACAGCG 2466
|||||||||||||| | || | | ||||| ||| |||||||| ||||||||
Sbjct 702 TCTCAATCACAAGC---G----GA-T--ACACACG-AAA-CTACTCTTCTTCACACA-AT 748
Query 2467 A-TGCCTTCTCTTCCTGTACCTGAACAT-TATAGTATACAGAAGCCTTCAACTTCTCAAT 2524
| |||||||||||||||||||||||| | | || | | ||||||||| ||||||||||||
Sbjct 749 ACTGCCTTCTCTTCCTGTACCTGAAC-TATGTACTTTGCAGAAGCCTGCAACTTCTCAAT 807
Query 2525 CACAAGCTGAGTTAAGAGCGGATACGCGCAAAGCTACTCTTGTTCACACAGT-G-G-TGC 2581
|||||||||||||||||||| |||||||||||||||||||||||||| ||| | | |||
Sbjct 808 CACAAGCTGAGTTAAGAGCGAATACGCGCAAAGCTACTCTTGTTCACGCAGCAGCGATGC 867
Query 2582 CTTCCCTTCCTGTAACTGAACATTGCACTTTGCAGAAGCCTGCAACTTCTCAATCACAAG 2641
|||| ||||||||| ||||||||| || | | ||||||||| ||||||||||||||||||
Sbjct 868 CTTCTCTTCCTGTACCTGAACATTACAGTCTACAGAAGCCTTCAACTTCTCAATCACAAG 927
Query 2642 CTGAGCTGAGAG 2653
||||| | ||||
Sbjct 928 CTGAGTTAAGAG 939
Score = 202 bits (109), Expect = 2e-50
Identities = 331/431 (77%), Gaps = 44/431 (10%)
Strand=Plus/Plus
Query 2248 CCTTCTCTTCCTGTACCTGAAC-ATTGCACTTTGCAGGAGCCT-ACAACTTCTAAATCAC 2305
||| |||||||| ||||||||| ||| || |||||| ||||| | ||||||| | || |
Sbjct 414 CCTGCTCTTCCTCTACCTGAACAATT-CATTTTGCACAAGCCTGA-AACTTCTCATTCGC 471
Query 2306 AAGCTGAGTT-A-AGA----A-CG-GAA-ACACACAAAGCTATTCTTGTTCACACAGTGA 2356
||| | |||| | ||| | | ||| || || ||| ||| || | |||||||||||
Sbjct 472 AAGTTCAGTTCAGAGATTGTATTGCGAATACGCATAAAACTACTCCTCTTCACACAGTGG 531
Query 2357 TGCCTTCTCTTCCTGTACCTGAACATTACAGTCTGCGGAAGCCTGCAACTTCTCAATCAC 2416
||| ||||||||| ||| ||||||||| || | ||| ||||||| || |||| || ||||
Sbjct 532 TGCATTCTCTTCCGGTAACTGAACATTCCACTTTGCAGAAGCCTACATCTTCCCAGTCAC 591
Query 2417 AAGCTGAGTT---A-AG---ATTG-GAGACACGCA---AAGCTACTCTTTTTCACACAGC 2465
||| |||||| | || |||| | || || || || |||||| | |||| ||||
Sbjct 592 AAGTTGAGTTAAGAGAGTCTATTGCG-GATACTCATGGAA-CTACTCCTCTTCAAACAGA 649
Query 2466 GATGCCTTCTCTTCC-TGTACCTGAACATTATAG-TATACAGAAGCCTTCAACTTCTCAA 2523
||| |||||||||| | ||||| |||| | | | | | |||||||| |||||||||||
Sbjct 650 GATTTCTTCTCTTCCAT-TACCTCAACACT-TCGTTTTGCAGAAGCCCGCAACTTCTCAA 707
Query 2524 TCACAAGCTGAGTTAAGAGCGGATACGCGCAAAGCTACTCTTGTTCACACAGTGGTGCCT 2583
|||||||| | | | | | || || ||| |||||||| |||||||| | |||||
Sbjct 708 TCACAAGC-G-G---ATA-C----ACACG-AAA-CTACTCTTCTTCACACAATACTGCCT 755
Query 2584 TCCCTTCCTGTAACTGAACAT-TGCACTTTGCAGAAGCCTGCAACTTCTCAATCACAAGC 2642
|| ||||||||| |||||| | || |||||||||||||||||||||||||||||||||||
Sbjct 756 TCTCTTCCTGTACCTGAAC-TATGTACTTTGCAGAAGCCTGCAACTTCTCAATCACAAGC 814
Query 2643 TGAGCTGAGAG 2653
|||| | ||||
Sbjct 815 TGAGTTAAGAG 825
> AT3G11880.1 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr3:3751660-3754060 FORWARD LENGTH=1707
Length=1707
Score = 1057 bits (572), Expect = 0.0
Identities = 928/1092 (85%), Gaps = 56/1092 (5%)
Strand=Plus/Plus
Query 387 GGAGGTGCGGCTATTGAGATTTGTCGATTACCTTGGGATAACACTTTCCGCTGTGCAATT 446
||||| || |||||||| ||||||||||||||||| ||||| ||||||| |||||||||
Sbjct 142 GGAGGAGCAGCTATTGAAATTTGTCGATTACCTTGAGATAAAACTTTCCTCTGTGCAATA 201
Query 447 TCCATGGCTGGAGACGTTC-AA--G---CCTTGGCCCAAGCTCATAGATCTGATCGATGT 500
|| ||||||||| | |||| || | ||||| |||||||| |||||| |||| |||||
Sbjct 202 TCTATGGCTGGACATGTTCAAAGGGTCTCCTTGCCCCAAGCTGATAGATATGATTGATGT 261
Query 501 TCCATTATCTCATATCCCTGAACCTGTCTACAAAACATCAGTCGATTGGCTCTACCAATT 560
||||||||||||||| |||| | |||||||| | ||||||||||| |||||| || ||||
Sbjct 262 TCCATTATCTCATATTCCTGTATCTGTCTACGACACATCAGTCGAGTGGCTCGACAAATT 321
Query 561 ACCTATTGGGACACTC-GCTGCCTTTGTATTGTGGTCGTTGAATCATATTCTCACGAATT 619
|||||||| |||| | |||||||||| ||||||||||||||| | ||||||||| ||
Sbjct 322 TTCTATTGGGTTACTCTG-TGCCTTTGTAGTGTGGTCGTTGAATCGTCTTCTCACGATTT 380
Query 620 TGGAACCAGGAGGTCC-CAA-AGGTGGGGACAATGGTCAGCAACGTACTACTTCCAAATC 677
||||||| | || ||| ||| | || | | |||| |||||||||||||||||
Sbjct 381 TGGAACC---A---CCACAACAGG-GAGGTC-A---CCAGCGACGTACTACTTCCAAATT 429
Query 678 TCATGTTGCAATATTTGTTGCACTAGCAATGGTATTGCGCATTGAACCTAATACTTTGGT 737
||| || ||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 430 TCACGTAGCAGTATTTGTTGCACTAGCAATGGTATTGCGTAATGAACCTAATACTTTGGT 489
Query 738 TATTGTATTGCCGACTCTCAAGG-AGTACAAGTATCGAGGACATGACAAGCTTCCGATTA 796
||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||
Sbjct 490 TATTGTATTGCCGACTCTCAAGGAAG-ACGAGTATCAAGGACATGACAAGCTTCCGATTT 548
Query 797 TAGTTTGGATGGTGGCTCAGGCCTCCCAAGGTGATTTATCTGTAGGCTTGCATTCATGGG 856
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 549 TAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATTTATCTGTAGGCTTGTATTCATGGT 608
Query 857 CGTCTAACTTGTTACC--------A-CTAG--TACTAG-T--C-G-A-----TAGCAACC 895
||| |||||||||||| | | || ||| | | | | | |||||||
Sbjct 609 CGTGTAACTTGTTACCAGTATTTTACCAAGAAAACTTGTTACCAGTATCCCGTAGCAACT 668
Query 896 CTCACTCAATGGATCTCATCCTGCAGTTGGTTGAGAAGATTTTGTCTACTCCAAATGCTC 955
|||| ||||||||||||||||||||||||| ||||| ||||||||||| || ||||||
Sbjct 669 CTCAGTCAATGGATCTCATCCTGCAGTTGGCTGAGATGATTTTGTCTAATCTTGATGCTC 728
Query 956 GGACCATACTTTTAAATGGAGTTATTATAGAGGAACTGCGACTGGTTTCACCTTATGCAT 1015
|||| |||||| |||| ||| ||||||| ||| ||||||| |||||||||||||||
Sbjct 729 GGACTATACTTGTAAACGGAACCGTTATAGATAAACAGCGACTGATTTCACCTTATGCAT 788
Query 1016 TTGAGATCTTGATGCGGCGTGCATT--C--C--CATCCGCAAGAGTAAAGGCTACAGAGA 1069
||||| |||||||||||| | |||| | | |||| | ||||||||||||||||||||
Sbjct 789 TTGAGCTCTTGATGCGGCTTACATTCCCTGCTTCATCTGAAAGAGTAAAGGCTACAGAGA 848
Query 1070 GGTTTGAGGCAATTTATCCCTTGTTGAAGGAAGTGGCTCTTGCCGGTGAACCAGGAAGCG 1129
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 849 GGTTTGAGGCAATTTATCCCTTGTTGAAGGAAGTGGCTCTTGCCTGTGAACCAGGAAGCG 908
Query 1130 AGTCAATGAAACAAGTCACTCAAGAAATATTCTATTGTTCTTTGGTAATTGCTGGAA-AA 1188
||| ||||||||||||||||||| |||||||| ||| ||||||| |||| ||||||| ||
Sbjct 909 AGTTAATGAAACAAGTCACTCAACAAATATTCCATTATTCTTTGATAATAGCTGGAAGAA 968
Query 1189 GGAAATCCTGCTTTAGCCACGGAAGCTACAGCAATGGCTATCTGGTCTTTGACCGAAAAC 1248
| ||||| || |||||||| ||||||||||||||| ||| |||||||| |||||||||||
Sbjct 969 G-AAATCTTGTTTTAGCCAAGGAAGCTACAGCAATCGCTGTCTGGTCTCTGACCGAAAAC 1027
Query 1249 GTAGAATGCTGCAAGCAATGGGAAAGACTCAATTGGGAGAATCAAA-AAGGTAGTGCTGC 1307
||||| ||||||||||| ||||||| |||| ||||||||||| ||| ||| ||||| |||
Sbjct 1028 GTAGATTGCTGCAAGCAGTGGGAAAAACTCTATTGGGAGAAT-AAAGAAGCTAGTGTTGC 1086
Query 1308 TGTTCTTAAAAAGCTTGAAGATGAATGGAATGATATTTCCCTCAAACTATCATCATCACC 1367
||||||||||||||||| ||||||| || |||||||||| |||||||| ||||||||||
Sbjct 1087 TGTTCTTAAAAAGCTTGTAGATGAAAGGGGTGATATTTCCATCAAACTAGCATCATCACC 1146
Query 1368 GAGTCATACTAT-CACTCTCATTCAAACTATGAAGAACATCAGGCTAAAGAATAAAAAAG 1426
|||||||| || ||| |||| |||||||||| ||| |||||||||||| || ||||||
Sbjct 1147 GAGTCATAA-ATTCACACTCAATCAAACTATGGAGAGCATCAGGCTAAAAAACGAAAAAG 1205
Query 1427 CCACCACTGAAG 1438
||| ||||||||
Sbjct 1206 CCATCACTGAAG 1217
> AT1G70770.1 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr1:26688230-26691277 REVERSE LENGTH=2317
Length=2317
Score = 680 bits (368), Expect = 0.0
Identities = 812/1019 (80%), Gaps = 59/1019 (6%)
Strand=Plus/Plus
Query 437 CTGTGCAATTTCCATGGCTGGAGACG-TTCAAGCCTTGGCCCAAGCTCATAGATCTGATC 495
||||||||||||||||| || ||| | || ||| | || | || || | |||||
Sbjct 649 CTGTGCAATTTCCATGGGTGAAGATGTTTAAAG-AGTCTCCTTTG-TC-TA-AGCTGATT 704
Query 496 GATGTTCCATTATCTCATATCCCTGAACCTGTCTACAAAACATCAGTCGATTGGCTCTAC 555
|| ||||| ||| ||||||| || ||||| || || || |||||||| |||||| || ||
Sbjct 705 GAAGTTCCGTTAGCTCATATTCCGGAACCAGTGTATAAGACATCAGTTGATTGGATCAAC 764
Query 556 CAAT--TACCTATTG-GGACACTCGCTGCCTTTGTATTGTGGTC-GTTGAATCATATTCT 611
| || | || |||| || |||| | |||||||| |||||| | ||| || ||||||
Sbjct 765 C-ATCGT-CCAATTGAGG-CACTTGGAGCCTTTGTGTTGTGGGCTTTTG-ATTGTATTCT 820
Query 612 CACGA-ATTT-G--G---AACCAGGAGGTCCCAAAGGTGGGGACAATGGTCAG-CAACGT 663
||| | |||| | | ||| ||| ||| | ||||||||| | || ||| | ||||
Sbjct 821 CAC-AGATTTAGCAGCACAACAAGGTGGTGCTAAAGGTGGGAAGAAGGGT-GGTCAACAA 878
Query 664 ACTACTTCCAAATCTCATGTTGCAATATTTGTTGCACTAGCAATGGTATTGCGCATTGAA 723
||||||||||||||||| || ||||||||||||||| |||| ||||||||||| | |||
Sbjct 879 ACTACTTCCAAATCTCAGGTGGCAATATTTGTTGCATTAGCGATGGTATTGCGTA-GGAA 937
Query 724 -CCTAATACTTTGGTTATTGTATTGCCGACTCTCAAGGAG--TAC-AAGTATCGA-GGAC 778
||| || ||||| || ||||||||| ||||| | |||| | | ||||||| | || |
Sbjct 938 GCCTGATGCTTTGACTAATGTATTGCCAACTCTGAGGGAGAATCCTAAGTATC-AGGGTC 996
Query 779 ATGACAAGCTTCCGATTATAGTTTGGATGGTGGCTCAGGCCTCCCAAGGTGATTTATCTG 838
| || ||||||||| ||| |||||||||| ||||||||||||||||||||||| || |||
Sbjct 997 AGGATAAGCTTCCGGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATATAGCTG 1056
Query 839 TAGGCTTGCATTCATGGGCGTC-TAACTTGTTACCACTAGTAC--TAGT-CG-A-TAGCA 892
|||||||| |||||||||| || ||||||||||| | || | || | | | | | |
Sbjct 1057 TAGGCTTGTATTCATGGGC-TCACAACTTGTTACCTGTTGT-CGGTAATAAGAACT-GTA 1113
Query 893 ACCCTCACTCAATGGATCTCATCCTGCAGTTGGTTGAGAAGATTTTGTCTACTCCAAATG 952
||||||| |||| ||||||||||||||||||||||||||| |||||| | | |||||| |
Sbjct 1114 ACCCTCAGTCAAGGGATCTCATCCTGCAGTTGGTTGAGAAAATTTTGACGAATCCAAAGG 1173
Query 953 CTCGGACCATACTTTTAAATGGAGTTATTATAG-AGGAACTGCGACTGGTTTCACCTTAT 1011
|||| ||||||||| ||||||||| | ||| | ||| | ||| || || ||||| |
Sbjct 1174 CTCGTACCATACTTGTAAATGGAGCTGTTA-GGAAGGGAGAGCGTTTGATTCCACCTCCT 1232
Query 1012 GCATTTGAGATCTTGATGCGGCGTGCATT-CC--CATC--C-GCAAGAGTAAAGGCTACA 1065
|||||||||||||| |||||| | |||| || |||| | ||||||||||||||||||
Sbjct 1233 TCATTTGAGATCTTGTTGCGGCTTACATTCCCTGCATCATCTGCAAGAGTAAAGGCTACA 1292
Query 1066 GAGAGGTTTGAGGCAATTTATCCCTTGTTGAAGGAAGTGGCTCTTGCCGGTGAACCAGGA 1125
||||||||||||||||| ||||||||| |||| |||||||||||||| |||| |||||||
Sbjct 1293 GAGAGGTTTGAGGCAATATATCCCTTGCTGAAAGAAGTGGCTCTTGCTGGTGCACCAGGA 1352
Query 1126 AGCGAGTCAATGAAACAAGTCACTCAAGAAATATTCTA-TTGTT-CTTTGGTAATT-GCT 1182
||| || | |||||||||||||| ||| | |||||| | || || || || |||| |||
Sbjct 1353 AGCAAGGCGATGAAACAAGTCACACAACAGATATTC-ACTT-TTGCTCTGA-AATTAGCT 1409
Query 1183 GGAAAAGGAAATCCTGCTTTAGCCACGGAAGCTACAGCAATGGCTATCTGGTCTTTGACC 1242
||| |||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||
Sbjct 1410 GGAGAAGGAAATCCTGTTTTAGCCAAGGAAGCTACAGCAATTGCTATCTGGTCTGTGACC 1469
Query 1243 GAAAACGTAGAATGCTGCAAGCAATGGGA-AAGACTCAATTGGGAGAATCAAAAAGGTAG 1301
||||| | || ||||||||||| ||||| || ||| | |||||||| ||| |||
Sbjct 1470 CAAAACTTTGATTGCTGCAAGCACTGGGACAAT-CTCTACAAGGAGAATCTGGAAGCTAG 1528
Query 1302 TGCTGCTGTTCTTAAAAAGCTTGAAGATGAATGGAATGAT-ATTTCCCTCAAACTATCAT 1360
|| |||||||||||||||||||| || |||||||| || ||| | ||||||||||||
Sbjct 1529 TGTTGCTGTTCTTAAAAAGCTTGTTGAAGAATGGAAAGAGCATT-CGGTCAAACTATCAT 1587
Query 1361 CATCACCGAGTCATACTATCACTCTCATTCAAACTATGAAGAA-CATCAGGCTAAAGAA 1418
||||||||| | || || ||||||||| | ||||||||| || | |||||||||||||
Sbjct 1588 CATCACCGAATGATGCTCTCACTCTCAACCGAACTATGAA-AAGCTTCAGGCTAAAGAA 1645
> AT3G11860.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: Sterile alpha motif (SAM) domain-containing protein
(TAIR:AT3G11890.2); Has 52 Blast hits to 14 proteins in 3 species:
Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants
- 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:3744816-3746850 FORWARD LENGTH=759
Length=759
Score = 453 bits (245), Expect = 5e-126
Identities = 305/334 (91%), Gaps = 3/334 (1%)
Strand=Plus/Plus
Query 1659 TAGACAGTTGGAACTGAGCAAGACTGTTCCTTCCAAGTTAGGTTTTGATGGAGAAGAAGA 1718
|||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||
Sbjct 99 TAGACAGTTGGAACTGAGCAAGGCTGGTCCTTCCAAGTTAGGATTTGATGGAGAAGAAGA 158
Query 1719 CGCTTGGGTCTTTGTTAAAAAGCAGAGAATCATCATTGTTTTGCCTTCTCTTCCACTACC 1778
|||||||||||||||||||||||||||| || ||||||| | ||||||||||||||| ||
Sbjct 159 CGCTTGGGTCTTTGTTAAAAAGCAGAGACTCTTCATTGTCTCGCCTTCTCTTCCACTTCC 218
Query 1779 TGAAC-A-A-CATCTCACTATGGAGAAACCTGCAATAACTTCTCAATTAGAAGCTGAGTT 1835
| ||| | | ||| ||||| ||||||||||||||||| || ||||||||||||||| |||
Sbjct 219 TCAACAACAGCATTTCACTTTGGAGAAACCTGCAATATCTCCTCAATTAGAAGCTGGGTT 278
Query 1836 AAGAGAAAGCATGGAGGATACGCAAGAAAGTACTTTTCTTCACACTGTGGTACCTGCTCT 1895
|||||||||||||||| ||||||||| ||||| ||| ||||||||||||| ||| ||||
Sbjct 279 TAGAGAAAGCATGGAGGTTACGCAAGATAGTACCTTTGTTCACACTGTGGTGCCTTCTCT 338
Query 1896 TCCTCTGCCTGAACATTTCATTATGCACAAGCCTGAAAATTCTGAGTCTCAAGCTGAGTT 1955
||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| ||
Sbjct 339 TCCTCTGCCTGAACATTTCATTAGGCATAAGCCTGAAACTTCTGAGTCTCAAGCTGAATT 398
Query 1956 AAGAGACGTTCTTGCGGATACGCACAAAACTACT 1989
||||||||||||||||||| ||||||||||||||
Sbjct 399 AAGAGACGTTCTTGCGGATCCGCACAAAACTACT 432
Score = 106 bits (57), Expect = 1e-21
Identities = 67/72 (93%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2321 CGGAAACACACAAAGCTATTCTTGTTCACACAGTGATGCCTTCTCTTCCTGTACCTGAAC 2380
|||| |||| |||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 584 CGGATACACGCAAAGCTACTCTTGTTCACACGGTGATGCCTTCTCTTCCTGTACCTGAAC 643
Query 2381 ATTACAGTCTGC 2392
|||||| |||||
Sbjct 644 ATTACATTCTGC 655
Score = 99.0 bits (53), Expect = 2e-19
Identities = 126/157 (80%), Gaps = 21/157 (13%)
Strand=Plus/Plus
Query 2345 TTCACACAGTGATGCCTTCTCTTCC-TGTACCTGAACA-TTACAG-TCTGCGGAAGCCTG 2401
|||| |||| |||| |||||||||| | ||||| |||| || | | ||||| ||||||||
Sbjct 506 TTCAAACAGAGATGTCTTCTCTTCCAT-TACCTCAACACTT-C-GTTCTGCAGAAGCCTG 562
Query 2402 C---AACTTCTCAATCACAAGCTGAGTTAAGATTGGAGACACGCAAAGCTACTCTTTTTC 2458
| ||||||||| ||| |||| | || | |||||||||||||||||| |||
Sbjct 563 CTGGAACTTCTCAGTCAAAAGC---G----GA-T----ACACGCAAAGCTACTCTTGTTC 610
Query 2459 ACACAGCGATGCCTTCTCTTCCTGTACCTGAACATTA 2495
|||| | ||||||||||||||||||||||||||||||
Sbjct 611 ACACGGTGATGCCTTCTCTTCCTGTACCTGAACATTA 647
Score = 97.1 bits (52), Expect = 9e-19
Identities = 147/189 (78%), Gaps = 21/189 (11%)
Strand=Plus/Plus
Query 2100 GGATACGCACGAAACTACTCTTCTTCAGACAGTGATACCTTCTC-CCCCTGTACCTGACC 2158
||||||||| | |||||||| |||||| |||| ||| |||||| || | ||||| | |
Sbjct 483 GGATACGCATGGAACTACTCCTCTTCAAACAGAGATGTCTTCTCTTCCAT-TACCTCAAC 541
Query 2159 A-TTACAG-TCTGCAGAAGCCTGCAGCTTCTAGATCACAAGCTGAGTTAAGAATGAAGAT 2216
| || | | ||||||||||||| | || || || || ||| || || | |||
Sbjct 542 ACTT-C-GTTCTGCAGAAGCCT---G---CTGGA--AC-TTCTCAGTCAA-AA-GCGGAT 588
Query 2217 A-A-GCAAAGCTACTCTTGTTCACACAGCGATGCCTTCTCTTCCTGTACCTGAACATTGC 2274
| | |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
Sbjct 589 ACACGCAAAGCTACTCTTGTTCACACGGTGATGCCTTCTCTTCCTGTACCTGAACATTAC 648
Query 2275 ACTT-TGCA 2282
| || ||||
Sbjct 649 A-TTCTGCA 656
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 157574367963
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5