BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg342019
Length=1134
Score E
Sequences producing significant alignments: (Bits) Value
AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:... 1956 0.0
AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313 ... 1568 0.0
AT5G09810.1 | Symbols: ACT7 | actin 7 | chr5:3052097-3054614 FO... 1042 0.0
AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798 ... 992 0.0
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-157... 905 0.0
AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-1713021... 769 0.0
> AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6474842-6477204
FORWARD LENGTH=1756
Length=1756
Score = 1956 bits (1059), Expect = 0.0
Identities = 1109/1134 (98%), Gaps = 0/1134 (0%)
Strand=Plus/Plus
Query 1 ATGGCCGAGGCTGATGATATTCAACCCATCGTCTGTGACAATGGTACCGGTATGGTGAAG 60
||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 251 ATGGCTGAGGCTGATGATATTCAACCAATCGTGTGTGACAATGGTACCGGTATGGTGAAG 310
Query 61 GCGGGATTTGCAGGAGATGATGCTCCAAGGGCTGTTTTCCCCAGTGTTGTTGGTAGGCCA 120
|| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 311 GCTGGATTTGCAGGAGATGATGCTCCCAGGGCTGTTTTTCCCAGTGTTGTTGGTAGGCCA 370
Query 121 AGACATCATGGTGTCATGGTTGGGATGAACCAGAAGGATGCATATGTTGGTGATGAAGCT 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGACATCATGGTGTCATGGTTGGGATGAACCAGAAGGATGCATATGTTGGTGATGAAGCA 430
Query 181 CAATCCAAGAGAGGTATTCTTACCTTGAAGTATCCTATTGAGCATGGTGTTGTCAGCAAC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 431 CAATCCAAGAGAGGTATTCTTACCTTGAAGTATCCTATTGAGCATGGTGTTGTTAGCAAC 490
Query 241 TGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTGCGCATTGCTCCT 300
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 491 TGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTTCGTATTGCTCCT 550
Query 301 GAAGAGCACCCTGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGCCAACAGAGAGAAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551 GAAGAGCACCCTGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGCCAACAGAGAGAAG 610
Query 361 ATGACTCAAATCATGTTTGAGACCTTTAACTCTCCCGCTATGTATGTCGCCATCCAAGCT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 ATGACTCAAATCATGTTTGAGACCTTTAACTCTCCCGCTATGTATGTCGCCATCCAAGCT 670
Query 421 GTTCTCTCCCTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATTCTGGTGATGGT 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 GTTCTCTCCTTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATTCTGGTGATGGT 730
Query 481 GTGTCTCACACTGTGCCAATCTACGAGGGTTTCTCACTTCCACATGCCATCCTCCGTCTC 540
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 731 GTGTCTCACACTGTGCCAATCTACGAGGGTTTCTCTCTTCCTCATGCCATCCTCCGTCTT 790
Query 541 GACCTTGCTGGTCGTGACCTCACTGATTACCTCATGAAGATCCTTACAGAGAGAGGTTAC 600
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 791 GACCTTGCTGGACGTGACCTTACTGATTACCTCATGAAGATCCTTACAGAGAGAGGTTAC 850
Query 601 ATGTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGAGAAGCTATCCTTT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 851 ATGTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGAGAAGCTCTCCTTT 910
Query 661 GTTGCTGTTGACTACGAGCAGGAGATGGAGACCTCAAAGACCAGCTCTTCCATCGAGAAG 720
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 911 GTTGCTGTTGACTACGAGCAGGAGATGGAAACCTCAAAGACCAGCTCTTCCATCGAGAAG 970
Query 721 AACTATGAATTACCCGATGGGCAAGTCATCACGATCGGTGCTGAGAGATTCAGATGCCCA 780
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 971 AACTATGAATTACCCGATGGGCAAGTCATCACGATTGGTGCTGAGAGATTCAGATGCCCA 1030
Query 781 GAAGTCTTGTTCCAGCCCTCGTTTGTGGGAATGGAAGCTGCTGGAATCCACGAGACAACC 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 GAAGTCTTGTTCCAGCCCTCGTTTGTGGGAATGGAAGCTGCTGGAATCCACGAGACAACC 1090
Query 841 TATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTACGGTAACATTGTG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1091 TATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTACGGTAACATTGTG 1150
Query 901 CTCAGTGGTGGAACCACTATGTTCTCTGGTATTGCAGACCGTATGAGCAAAGAAATCACA 960
|||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct 1151 CTCAGTGGTGGAACCACTATGTTCTCAGGTATCGCTGACCGTATGAGCAAAGAAATCACA 1210
Query 961 GCACTTGCACCAAGCAGCATGAAGATTAAGGTCGTTGCACCACCTGAAAGGAAGTACAGT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1211 GCACTTGCACCAAGCAGCATGAAGATTAAGGTCGTTGCACCACCTGAAAGGAAGTACAGT 1270
Query 1021 GTCTGGATCGGTGGTTCCATTCTTGCTTCCCTCAGCACATTCCAGCAGATGTGGATCTCC 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 GTCTGGATCGGTGGTTCCATTCTTGCTTCCCTCAGCACATTCCAGCAGATGTGGATCTCC 1330
Query 1081 AAGGCTGAGTATGATGAGGCAGGTCCAGGAATTGTTCACAGAAAATGCTTCTAA 1134
||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1331 AAGGCCGAGTATGATGAGGCAGGTCCAGGAATCGTTCACAGAAAATGTTTCTAA 1384
> AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313
FORWARD LENGTH=1707
Length=1707
Score = 1568 bits (849), Expect = 0.0
Identities = 1041/1136 (92%), Gaps = 4/1136 (0%)
Strand=Plus/Plus
Query 1 ATGGCCGAGGCTGATGATATTCAACCCATCGTCTGTGACAATGGTACCGGTATGGTGAAG 60
|||||||| |||||||| |||||||| || ||||||||||||||||| || ||||| |||
Sbjct 208 ATGGCCGATGCTGATGACATTCAACCTATTGTCTGTGACAATGGTACTGGAATGGTTAAG 267
Query 61 GCGGGATTTGCAGGAGATGATGCTCCAAGGGCTGTTTTCCCCAGTGTTGTTGGTAGGCCA 120
|| ||||| || |||||||||||||| || || ||||||||||||||||||||| | ||
Sbjct 268 GCTGGATTCGCTGGAGATGATGCTCCCAGAGCGGTTTTCCCCAGTGTTGTTGGTCGACCT 327
Query 121 AGACATCATGGTGTCATGGTTGGGATGAACCAGAAGGATGCATATGTTGGTGATGAAGCT 180
||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 328 AGACATCATGGTGTCATGGTTGGGATGAATCAGAAAGATGCGTATGTTGGTGATGAAGCA 387
Query 181 CAATCCAAGAGAGGTATTCTTACCTTGAAGTATCCTATTGAGCATGGTGTTGTCAGCAAC 240
|||||||| |||||||| || || ||||| || |||||||||||||||||||| ||||||
Sbjct 388 CAATCCAAAAGAGGTATCCTCACATTGAAATACCCTATTGAGCATGGTGTTGTTAGCAAC 447
Query 241 TGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTGCGCATTGCTCCT 300
|||||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||
Sbjct 448 TGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTATTGCTCCT 507
Query 301 GAAGAGCACCCTGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGCCAACAGAGAGAAG 360
||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 508 GAAGAGCACCCGGTTCTACTTACCGAGGCTCCTCTTAACCCAAAAGCCAACAGAGAGAAG 567
Query 361 ATGACTCAAATCATGTTTGAGACCTTTAACTCTCCCGCTATGTATGTCGCCATCCAAGCT 420
|||||||| |||||||||||||||||||| ||||| ||||||||||| ||||| ||||||
Sbjct 568 ATGACTCAGATCATGTTTGAGACCTTTAATTCTCCAGCTATGTATGTTGCCATTCAAGCT 627
Query 421 GTTCTCTCCCTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATTCTGGTGATGGT 480
||||| || || |||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 628 GTTCTATCACTTTACGCCAGTGGTCGTACAACCGGTATTGTGTTGGACTCTGGTGATGGT 687
Query 481 GTGTCTCACACTGTGCCAATCTACGAGGGTTTCTCACTTCCACATGCCATCCTCCGTCTC 540
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 688 GTGTCTCACACTGTGCCTATCTACGAGGGTTTCTCACTTCCACATGCTATCCTCCGTCTC 747
Query 541 GACCTTGCTGGTCGTGACCTCACTGATTACCTCATGAAGATCCTTACAGAGAGAGGTTAC 600
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 748 GACCTTGCTGGTCGTGACCTTACTGATTACCTCATGAAGATCCTTACCGAGAGAGGTTAC 807
Query 601 ATGTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGAGAAGCTATCCTTT 660
|||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct 808 ATGTTCACCACAACAGCAGAACGGGAAATTGTGAGAGACATCAAGGAGAAGCTTTCCTTT 867
Query 661 GTTGCTGTTGACTACGAGCAGGAGATGGAGACCTC-AAAGACCAGCTCTTCCATCGAGAA 719
|| ||||| ||||||||||| |||||||||||||| ||| |||||||| |||||||| ||
Sbjct 868 GTCGCTGTCGACTACGAGCAAGAGATGGAGACCTCGAAA-ACCAGCTCCTCCATCGAAAA 926
Query 720 GAACTATGAATTACCCGATGGGCAAGTCATCACGATCGGTGCTGAGAGATTCAGATGCCC 779
|||||||||||||||||| || ||||| |||||||||||||||||||||||||| |||||
Sbjct 927 GAACTATGAATTACCCGACGGACAAGTGATCACGATCGGTGCTGAGAGATTCAGGTGCCC 986
Query 780 AGAAGTC-TTGTTCCAGCCCTCGTTTGTGGGAATGGAAGCTGCTGGAATCCACGAGACAA 838
||||||| || |||||||| || ||||| |||||||||||||| || |||||||||||||
Sbjct 987 AGAAGTCCTT-TTCCAGCCATCATTTGTTGGAATGGAAGCTGCAGGGATCCACGAGACAA 1045
Query 839 CCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTACGGTAACATTG 898
| || ||||| ||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct 1046 CTTACAACTCGATCATGAAGTGTGATGTTGATATCAGGAAGGACCTTTACGGTAACATTG 1105
Query 899 TGCTCAGTGGTGGAACCACTATGTTCTCTGGTATTGCAGACCGTATGAGCAAAGAAATCA 958
||||||||||||| || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1106 TGCTCAGTGGTGGTACAACTATGTTCTCAGGTATTGCAGACCGTATGAGCAAAGAGATCA 1165
Query 959 CAGCACTTGCACCAAGCAGCATGAAGATTAAGGTCGTTGCACCACCTGAAAGGAAGTACA 1018
|||| ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct 1166 CAGCTCTTGCCCCGAGCAGCATGAAGATTAAGGTCGTGGCACCACCCGAGAGGAAGTACA 1225
Query 1019 GTGTCTGGATCGGTGGTTCCATTCTTGCTTCCCTCAGCACATTCCAGCAGATGTGGATCT 1078
|||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct 1226 GTGTCTGGATTGGTGGTTCTATCCTTGCTTCCCTCAGCACTTTCCAGCAGATGTGGATCT 1285
Query 1079 CCAAGGCTGAGTATGATGAGGCAGGTCCAGGAATTGTTCACAGAAAATGCTTCTAA 1134
| ||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct 1286 CTAAGGCAGAGTATGATGAAGCAGGTCCAGGCATTGTCCACAGAAAATGCTTCTAA 1341
> AT5G09810.1 | Symbols: ACT7 | actin 7 | chr5:3052097-3054614
FORWARD LENGTH=1700
Length=1700
Score = 1042 bits (564), Expect = 0.0
Identities = 958/1148 (83%), Gaps = 28/1148 (2%)
Strand=Plus/Plus
Query 1 ATGGCCGA-GGCTGATGATATTCAACCCA-TCGTCTGTGACAATGGTACCGGTATGGTGA 58
|||||||| || ||| ||||||| | ||| | |||||||||||||| || || |||||||
Sbjct 173 ATGGCCGATGG-TGAGGATATTC-AGCCACTTGTCTGTGACAATGGAACTGGAATGGTGA 230
Query 59 AGGCGGGATTTGCAGGAGATGATGCTCCAAGGGCTGTTTTCCCCAGTGTTGTTGGTAGGC 118
|||| || ||||| || |||||||| || || || || ||||| ||| |||||||| | |
Sbjct 231 AGGCTGGTTTTGCTGGTGATGATGCCCCGAGAGCAGTGTTCCCAAGTATTGTTGGTCGTC 290
Query 119 CAAGACATCA-TGGTGTCATGGTTGGGATGAACCAGAAGGATGCATATGTTGGTGATGAA 177
| || || || ||||||||||||||| ||| ||||| ||||| || ||||||||||||
Sbjct 291 CTAGGCA-CACTGGTGTCATGGTTGGTATGGGTCAGAAAGATGCTTACGTTGGTGATGAA 349
Query 178 GCTCAATCCAAGAGAGGTATTCTTACCT-TGAAGTATCCTATTGAGCATGGTGTTGTCAG 236
||||| |||||||||||||| || | || |||||||||| || || |||||| |||| ||
Sbjct 350 GCTCAGTCCAAGAGAGGTATCCTCA-CTCTGAAGTATCCAATCGAACATGGTATTGTAAG 408
Query 237 CAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTGCGCATTGC 296
||||||||||| ||||||||||| |||||||||||||||||||| ||||| || ||||
Sbjct 409 TAACTGGGATGACATGGAAAAGATATGGCATCACACTTTCTACAACGAGCTTCGTGTTGC 468
Query 297 TCCTGAAGAGCACCCTGTTCTTCTTACCGAGGCTCCTCTTAACCC-AAAGGCCAACAGAG 355
||||| |||||||| ||||| || || ||||| ||||||||||| ||| || ||||| |
Sbjct 469 CCCTGAGGAGCACCCAGTTCTACTCACAGAGGCACCTCTTAACCCTAAA-GCTAACAGGG 527
Query 356 AGAAGATGACTCAAATCATGTTTGAGACCTTTAACTCTCCC-GCTATGTATGTCGCCATC 414
||||||||||||| |||||||||||||| || || | |||| || |||||||| |||||
Sbjct 528 AGAAGATGACTCAGATCATGTTTGAGACATTCAA-TGTCCCTGCCATGTATGTTGCCATT 586
Query 415 CAAGCTGTTCTCTCCCTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATTCTGGT 474
|| || ||||| || || || ||||||||||||||||||||||||||||| |||||||||
Sbjct 587 CAGGCCGTTCTTTCTCTCTATGCCAGTGGTCGTACAACCGGTATTGTGCTCGATTCTGGT 646
Query 475 GATGGTGTGTCTCACACTGTGCCAATCTACGAGGGTT-T-CTCACTTCCACATGCCATCC 532
||||||||||||||||||||||||||||||||||| | | ||| |||| ||||| ||||
Sbjct 647 GATGGTGTGTCTCACACTGTGCCAATCTACGAGGGGTATGCTC--TTCCTCATGCTATCC 704
Query 533 TCCGTCTCGACCTTGCTGGTCGTGACCTCACTGATT-ACCTCATGAAGATCCTTACAGAG 591
| ||||| || ||||| ||||| || ||||| || | || |||||||||| || || |||
Sbjct 705 TTCGTCTTGATCTTGCGGGTCGGGATCTCACAGACTCAC-TCATGAAGATTCTCACTGAG 763
Query 592 AGAGGTTACATGTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGAGAAG 651
|||||||||||||||||||| || ||||| ||||||||||| | ||||| ||||||||
Sbjct 764 AGAGGTTACATGTTCACCACTACCGCAGAACGGGAAATTGTCCGTGACATAAAGGAGAAA 823
Query 652 CTATCCTT-TGTTGCTGTTGACTACGAGCAGGAGATGGAGACCTCAAAGACCAGCTCTTC 710
|| | ||| ||| ||| ||||||||||||| ||| | ||||| | |||| ||| |||||
Sbjct 824 CT-TGCTTATGTCGCTCTTGACTACGAGCAAGAGCTAGAGACAGCCAAGAGCAGTTCTTC 882
Query 711 CA-TCGAGAAGAACTATGAATTACCCGATGGGCAAGTCATCACGATCGGTGCTGAGAGAT 769
| | ||||||||||| || |||| ||||| |||||||| || ||||| ||||||||||
Sbjct 883 -AGTGGAGAAGAACTACGAGCTACCTGATGGACAAGTCATAACCATCGGAGCTGAGAGAT 941
Query 770 TCAGATGCCCAGAAGT-CTTGTTCCAGCCCTCGTTTGTGGGAATGGAAGCTGCTGGAATC 828
|| | || || || || || ||||||||| ||| | | |||||||||||| ||||||||
Sbjct 942 TCCGTTGTCCTGAGGTTCT-GTTCCAGCCATCGCTCATCGGAATGGAAGCTCCTGGAATC 1000
Query 829 CACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTAC 888
|| || ||||| || ||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct 1001 CATGAAACAACTTACAACTCCATCATGAAATGTGATGTCGATATCAGGAAGGATCTCTAT 1060
Query 889 GGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCTCTGGTATTGCAGACCGTATGAGC 948
|| ||||| || ||||||||||| |||| |||||| | || ||||| ||||||||||||
Sbjct 1061 GGAAACATCGTTCTCAGTGGTGGTTCCACCATGTTCCCAGGAATTGCTGACCGTATGAGC 1120
Query 949 AAAGAAATCACAGCACTTGCACCAAGCAGCATGAAGATTAAGGTCGTTGCACCACCTGAA 1008
||||| ||||| || |||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct 1121 AAAGAGATCACCGCTCTTGCACCTAGCAGCATGAAGATCAAGGTGGTTGCACCGCCAGAG 1180
Query 1009 AGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTGCTTCCCTCAGCACATTCCAGCAG 1068
|| || ||||||||||||||||| || || || ||||| ||||||||||| ||||| |||
Sbjct 1181 AGAAAATACAGTGTCTGGATCGGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAACAG 1240
Query 1069 ATGTGGATCTCCAAG-GCTGAGTATGATGAGGCAGGTCCAG-GAATTGTTCACAGAAAAT 1126
|||||||| || ||| | |||||| |||||| |||||||| || |||||||||| ||||
Sbjct 1241 ATGTGGATTTCAAAGAG-TGAGTACGATGAGTCAGGTCCATCGA-TTGTTCACAGGAAAT 1298
Query 1127 GCTTCTAA 1134
||||||||
Sbjct 1299 GCTTCTAA 1306
> AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798
FORWARD LENGTH=1434
Length=1434
Score = 992 bits (537), Expect = 0.0
Identities = 950/1149 (83%), Gaps = 30/1149 (3%)
Strand=Plus/Plus
Query 1 ATGGCCGA-GGCTGATGATATTCAACC-CATCGTCTGTGACAATGGTACCGGTATGGTGA 58
||||| || || ||| || ||||| || | |||||||||||||||| ||||| ||||| |
Sbjct 112 ATGGCAGATGG-TGAAGACATTCAGCCTC-TCGTCTGTGACAATGGAACCGGAATGGTTA 169
Query 59 AGGCGGGATTTGCAGGAGATGATGCTCCAAGGGCTGTTTTCCCCAGTGTTGTTGGTAGGC 118
|||| |||||||| ||||||||||| ||||| ||||| ||||| || | |||||| | |
Sbjct 170 AGGCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTC 229
Query 119 CAAGACATCA-TGGTGTCATGGTTGGGAT-GAACCAGAAGGATGCATATGTTGGTGATGA 176
| |||| || ||||||||||||||| || | | || || ||||| || |||||||||||
Sbjct 230 CTCGACA-CACTGGTGTCATGGTTGGTATGGGA-CAAAAAGATGCTTACGTTGGTGATGA 287
Query 177 AGCTCAATCCAAGAGAGGTATTCTT-ACCTTGAAGTATCCTATTGAGCATGGTGTTGTCA 235
||||| || |||||||||||| || || ||||| |||||||||||||||||| |||| |
Sbjct 288 GGCTCAGTCTAAGAGAGGTATT-TTGACATTGAAATATCCTATTGAGCATGGTATTGTTA 346
Query 236 GCAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTGCGCATTG 295
||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||
Sbjct 347 GCAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTG 406
Query 296 CTCCTGAAGAGCACCCTGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGCCAA-CAGA 354
| |||||||| |||||||||||||| || ||||||||||| ||||| |||||||| | |
Sbjct 407 CACCTGAAGAACACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATC-GT 465
Query 355 GAGAAGATGACTCAAATCATGTTTGAGACCTTT-AACTCTCCCGCTATGTATGTCGCCAT 413
||||| |||||||| || |||||||| | |||| ||| |||| || ||||||||||| ||
Sbjct 466 GAGAAAATGACTCAGATTATGTTTGA-AACTTTCAACACTCCTGCCATGTATGTCGCTAT 524
Query 414 CCAAGCTGTTCTCTCCCTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATTCTGG 473
|||||||||||| ||||| ||||| ||||||||||| || ||||||||| |||| |||||
Sbjct 525 CCAAGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCTGG 584
Query 474 TGATGGTGTGTCTCACACTGTGCCAATCTACG-AGGGT-TTCTCACTTCCACATGCCATC 531
||||||||| ||||||||| ||||| || | ||| | | || ||||||||||| ||
Sbjct 585 AGATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCT--CTTCCACATGCTATT 642
Query 532 CTCCGTCTCGACCTTGCTGGTCGTGACCTCACTGATTACCTCATGAAGATCCTT-ACAGA 590
|| ||| | |||||||| || |||||||| |||||||||||||||||||| ||| || ||
Sbjct 643 CTGCGTTTGGACCTTGCAGGCCGTGACCTTACTGATTACCTCATGAAGAT-CTTAACCGA 701
Query 591 GAGAGGTTACAT-GTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGAGA 649
| | |||||| | ||||| || |||||||||| ||||| ||||| || | || ||||
Sbjct 702 GCGTGGTTAC-TCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGA 760
Query 650 AGCTATCCTT-TGTTGCTGTTGACTACGAGCAGGAGATGGAGACCTCAAAGACCAGCTCT 708
| || | ||| | || ||||||||||||| |||||||| || |||| || |||||
Sbjct 761 AACT-TGCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGCAAACACAAGCTCA 819
Query 709 TCCATCGAGAAGAACTATGAATTACCCGATGGGCAAGTCATCACGATCGGTGCTGAGAGA 768
||| | ||||||| |||||| || || ||||| || || ||||| || || | ||||||
Sbjct 820 TCCGTTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGA 879
Query 769 TTCAGATGCCCAGAAG-TCTTGTTCCAGCCCTCGTTT-GTGGGAATGGAAGCTGCTGGAA 826
||| | ||||| || | || ||||||| || || ||| |||||||||||||||||||| |
Sbjct 880 TTCCGCTGCCCGGAGGTTC-TGTTCCAACCGTC-TTTGGTGGGAATGGAAGCTGCTGGTA 937
Query 827 TCCACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGT 886
| |||||||| || || || || |||||||||||||||||||||||||||||||||||||
Sbjct 938 TTCACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGT 997
Query 887 ACGGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCTCTGGTATTGCAGACCGTATGA 946
| || |||||||||||||||||||||||||| |||||| |||| ||||| || | ||||
Sbjct 998 ATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGA 1057
Query 947 GCAAAGAAATCACAGCACTTG-CACCAAGCAGCATGAAGATTAAGGTCGTTGCACCACCT 1005
||||||| ||||| || ||| | ||||||||||||||||||||||| ||||| |||||
Sbjct 1058 GCAAAGAGATCACTGCT-TTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCA 1116
Query 1006 GAAAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTGCTTCCCTCAGCACATTCCAG 1065
|| |||||||||||||||||||| || || |||||||| || || ||||| || |||||
Sbjct 1117 GAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAA 1176
Query 1066 CAGATGTGGATCTCCAAGGCTGAGTATGATGAGGCAGGTCCAGGAATTGTTCACAGAAAA 1125
||||||||||| | ||||| |||||||||||| |||| ||| ||| || ||||| ||
Sbjct 1177 CAGATGTGGATAGCAAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAG 1236
Query 1126 TGCTTCTAA 1134
|||||||||
Sbjct 1237 TGCTTCTAA 1245
> AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-15781561
FORWARD LENGTH=1618
Length=1618
Score = 905 bits (490), Expect = 0.0
Identities = 944/1158 (82%), Gaps = 52/1158 (4%)
Strand=Plus/Plus
Query 1 ATGGCCGA-GGCTGATGATATTCAACC-CATCGTCTGTGACAATGGTACCGGTATGGTGA 58
||||| || || ||| || |||||||| | | || || |||||||| || || ||||| |
Sbjct 165 ATGGCTGATGG-TGAAGACATTCAACCTC-TTGTTTGCGACAATGGAACTGGAATGGTTA 222
Query 59 AGGCGGGATTTGCAGGAGATGATGCTCCAAGGGCTGT-TTTCCCCAGTGTTGTTGGTAGG 117
|||| || ||||| || |||||||| || || ||||| ||| || ||| |||| ||| |
Sbjct 223 AGGCTGGTTTTGCTGGGGATGATGCACCTAGAGCTGTGTTT-CCTAGTATTGTGGGTCGT 281
Query 118 CCAAGACATCA-TGGTGTCATGGTTGGGATGAACCAGAAGGATGCATATGTTGGTGATGA 176
|| | || || ||||| |||||||||||| || |||||||| |||||||| |||||
Sbjct 282 CCTCGTCA-CACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGA 340
Query 177 AGCTCAATCCAAGA-GAGGTATTCTTACCT-TGAAGTATCCTATTGAGCATGGTGTTGTC 234
|||||||||||| | |||||||| ||| || | ||||| |||||||||||||| |||||
Sbjct 341 AGCTCAATCCAA-ACGAGGTATT-TTAACTCTCAAGTACCCTATTGAGCATGGAATTGTC 398
Query 235 AGCAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTGCGCATT 294
| ||| |||||||| ||||| ||||| |||||||||||||||||||||||||| || ||
Sbjct 399 AACAATTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTT 458
Query 295 GCTCCTGAAGAGCACCCTGTTCTTCTTACCGAGGCTCCTCTTAACCC-AAAGGCCAA-CA 352
|||||||| || || ||| |||| ||||||||||| || |||||||| ||| || || |
Sbjct 459 GCTCCTGAGGAACATCCTATTCTACTTACCGAGGCACCGCTTAACCCGAAA-GCTAATC- 516
Query 353 GAGAGAAGATGACTCAAATCATGTTTGAGACCTTT-AACT-CTCCC-GCTATGTATGTCG 409
| |||||||||||||||||||||||||||| |||| || | | ||| ||||||||||| |
Sbjct 517 GTGAGAAGATGACTCAAATCATGTTTGAGA-CTTTCAA-TGC-CCCTGCTATGTATGTGG 573
Query 410 CCATCCAAGCTGTTCTCTCCCTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATT 469
| || || |||||||| || || || |||||||||||||| |||||||||||||| || |
Sbjct 574 CTATTCAGGCTGTTCTTTCTCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTCGACT 633
Query 470 CTGGTGATGGTGTG-TCTCACACTGTGCCAATCTACGA-GGGTTTCTCACTTCCACATGC 527
|||| ||||||||| | |||||||| || ||||| || |||| | |||||||||||||
Sbjct 634 CTGGAGATGGTGTGAGC-CACACTGTTCCTATCTATGAGGGGTAT-GCACTTCCACATGC 691
Query 528 CATCCTCCGTCTCGACCTTGCTGGTCGTGACCTCACTGATTAC-CTCATGAAGATCCTTA 586
||||| ||||| || |||||||||||||||||||| || | | || ||||||||||| |
Sbjct 692 TATCCTACGTCTTGATCTTGCTGGTCGTGACCTCACGGA-TGCGCTGATGAAGATCCTAA 750
Query 587 CAGAGAGAGGTTACAT-GTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAG 645
| ||| | |||||| | |||||||| ||||||||||| |||||||| |||||||| |||
Sbjct 751 CCGAGCGTGGTTAC-TCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAG 809
Query 646 GAGAAGCTATCCTTTGTTGCTGTTGACTACGAGCAGGAGA-TGGAGAC--CTCAAAGACC 702
|||||||| | || ||||| |||||||||||||||| | | ||||| | |||| |||
Sbjct 810 GAGAAGCTTTGCTACATTGCTCTTGACTACGAGCAGGA-ACTCGAGACAGC-CAAA-ACC 866
Query 703 AGCTCTTCCATCGAGAAGAACTATGAATTACCCGATGGGCAAGTCATCACGATCGG-TGC 761
||||| || | ||||||||||| || |||| ||||||||||| ||||| || || | |
Sbjct 867 AGCTCATCTGTTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGAT-C 925
Query 762 TGAGAGATTCAGATGCCCAGAAG-TCTTGTTCCAGCCCTCGTTTG-TGGGAATGGAAG-C 818
||| ||||| | || || || | |||| | |||||| || | || | || |||| ||
Sbjct 926 AGAGCGATTCCGTTGTCCTGAGGTTCTT-TACCAGCCATC-TATGATTGGTATGG-AGAA 982
Query 819 TGCTGGAATCCACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAA 878
|||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct 983 TGCTGGTATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGGAA 1042
Query 879 GGATC-TGTACGGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCTCTGGTATTGCAG 937
||| | |||||||||||||||||||||||||||||||||| |||||| |||| || || |
Sbjct 1043 GGA-CTTGTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCTGGAATCGCCG 1101
Query 938 ACCGTATGAGCAAAGAAATCACAGCACTTG-CACCAAGCAGCATGAAGATTAAGGTCGTT 996
|| | ||||||||||| ||||| || ||| | ||||||||||||||||| || ||||||
Sbjct 1102 ACAGAATGAGCAAAGAGATCACTGCT-TTGGCTCCAAGCAGCATGAAGATCAAAGTCGTT 1160
Query 997 GCACCACCTGAAAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTG-CTTCCCTCAG 1055
|| || || || ||||| ||| ||||||||| || || ||||| |||| | ||||||||
Sbjct 1161 GCCCCTCCAGAGAGGAAATACTCTGTCTGGATTGGAGGGTCCAT-CTTGGCCTCCCTCAG 1219
Query 1056 CACATTCCAGCAGATGTGGATCTCCAAGGCTGAGTATGATGAGGCAGGTCCAG-GAATTG 1114
|| |||||||||||||||||| | ||||| |||||||| ||| |||||||| || |||
Sbjct 1220 TACCTTCCAGCAGATGTGGATCGCAAAGGCAGAGTATGACGAGTCAGGTCCATCGA-TTG 1278
Query 1115 TTCACAGAAAATGCTTCT 1132
||||||| || |||||||
Sbjct 1279 TTCACAGGAAGTGCTTCT 1296
> AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-17130210
FORWARD LENGTH=1453
Length=1453
Score = 769 bits (416), Expect = 0.0
Identities = 891/1118 (80%), Gaps = 42/1118 (4%)
Strand=Plus/Plus
Query 1 ATGGCCGA-GGCTGATGATATTCAACC-CATCGTCTGTGACAATGGTACCGGTATGGTGA 58
||||| || || ||| |||||||| || | |||| || || || || || || ||||| |
Sbjct 91 ATGGCGGACGG-TGAAGATATTCAGCCGC-TCGTTTGCGATAACGGGACTGGAATGGTCA 148
Query 59 AGGCGGGATTTGCAGGAGATGATGCTCCAAGGGCTGTTTTCCCCAGTGTTGTTGGTAGGC 118
|||| || |||||||| ||||||||||| || ||||| ||||| ||| | ||||| | |
Sbjct 149 AGGCTGGTTTTGCAGGTGATGATGCTCCTAGAGCTGTATTCCCAAGTATCGTTGGCCGTC 208
Query 119 CAAGACATCA-TGGTGTCATGGTTGGGAT-GAACCAGAAGGATGCATATGTTGGTGATGA 176
|| | || || || || |||||||| || | | || ||||||||||| || || || ||
Sbjct 209 CACGTCA-CACGGGAGTGATGGTTGGAATGGGA-CAAAAGGATGCATACGTCGGAGACGA 266
Query 177 AGCTCAATCCAAGA-GAGGTATTCTT-ACCT-TGAAGTATCCTATTGAGCATGGTGTTGT 233
|| || || || | | |||| |||| | || | |||||||| |||||||||||| ||||
Sbjct 267 GGCACAGTCGAA-ACGTGGTA-TCTTGA-CTCTCAAGTATCCAATTGAGCATGGTATTGT 323
Query 234 CAGCAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTGCGCAT 293
|| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct 324 CAACAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTGCGTGT 383
Query 294 TGCTCCTGAAGAGCACCCTGTTCTT-CTTACCGAGGCTCCTCTTAACCCAAAGGCCAACA 352
||| || |||||||| || ||| || || ||||| || || ||||| || ||||| |||
Sbjct 384 TGCCCCGGAAGAGCATCCGGTT-TTGCTAACCGAAGCGCCGCTTAATCCGAAGGCTAACC 442
Query 353 GAGAGAAGATGACTCAAATCATGTTTGAGACCTTTAACTCTCCCGCTATGTATGTCGCCA 412
| ||||||||||| || ||||||||||| || || ||| |||| ||||||||||| ||||
Sbjct 443 GTGAGAAGATGACACAGATCATGTTTGAAACATTCAACACTCCTGCTATGTATGTTGCCA 502
Query 413 TCCAAGCTGTTCTCTCCCTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATTCTG 472
| ||||||||||||||||| || || ||||| ||||| || |||||||| |||| ||||
Sbjct 503 TTCAAGCTGTTCTCTCCCTCTATGCTAGTGGCCGTACTACTGGTATTGTTTTGGACTCTG 562
Query 473 GTGATGGTGTGT-CTCACACTGTGCCAATCTACGAGGGTT-TCTCACTTCCACATGCCAT 530
| ||||||||| | ||||| || |||||||||||||||| | |||||||||| || ||
Sbjct 563 GAGATGGTGTGAGC-CACACGGTACCAATCTACGAGGGTTATG-CACTTCCACACGCAAT 620
Query 531 CCTCCGTCTCGACCTTGCTGGTCGTGACCTCACTGATTACCTCATGAAGATCCTTACAGA 590
||| ||||| || ||||| ||||||||||| || || |||||||||| ||||| |||||
Sbjct 621 CCTGCGTCTTGATCTTGCAGGTCGTGACCTAACCGACCACCTCATGAAAATCCTGACAGA 680
Query 591 GAGAGGTTACATG-TTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGAGA 649
| | |||||| | ||||||||||| || ||||| || ||||| |||||||| |||||||
Sbjct 681 GCGTGGTTAC-TCATTCACCACAACTGCTGAGCGTGAGATTGTCAGAGACATGAAGGAGA 739
Query 650 AGCTATCCTTTGTTGCTGTTG-ACTACGAGCAGGAGATGGAGACCTC-AAAGACCAGCTC 707
|||| || | |||| ||| |||| ||||| ||| | ||||| || ||| ||||||||
Sbjct 740 AGCTCTCGTACATTGCC-TTGGACTATGAGCAAGAGCTTGAGACTTCCAAA-ACCAGCTC 797
Query 708 TTCCATCGAGAAGAACTAT-GAATTACCCGATGGGCAAGTCATCACGATCGGTGCTGAGA 766
|| | ||||||| || | || | || || || ||||| || || ||||| || |||
Sbjct 798 ATCTGTGGAGAAGAGCT-TCGAGCTGCCAGACGGTCAAGTGATAACCATCGGGGCAGAGC 856
Query 767 GATTCAGATGCCCAGAAGT-CTTGTTCCAGCCCTCGTTTG-TGGGAATGGAAGCTGCTGG 824
| ||| | || || ||||| || ||||||||| || | | | ||||||||| | | ||
Sbjct 857 GTTTCCGGTGTCCTGAAGTTCT-GTTCCAGCCATCCAT-GATCGGAATGGAAAATCCGGG 914
Query 825 AATCCACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAGGATCT 884
||| || || || || || |||||||||||||| ||||||||||||||||||||||||||
Sbjct 915 AATTCATGAAACTACTTACAACTCAATCATGAAATGTGATGTGGATATCAGGAAGGATCT 974
Query 885 GTACGGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCT--CTGGTATTGCAGACCGT 942
|| || ||||||||||| |||||||| ||||| ||||| | | || |||| || |
Sbjct 975 TTATGGAAACATTGTGCTTAGTGGTGGCACCACAATGTT-TGGCGGG-ATTGGTGATAGG 1032
Query 943 ATGAGCAAAGAAATCACAGCACTTG-CACCAAGCAGCATGAAGATTAAGGTCGTTGCACC 1001
||||| ||||||||||| || ||| | || ||||| |||||||| || || ||||| ||
Sbjct 1033 ATGAGTAAAGAAATCACCGCG-TTGGCGCCGAGCAGTATGAAGATCAAAGTGGTTGCTCC 1091
Query 1002 ACCTGAAAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTG-CTTCCCTCAGCACAT 1060
||| ||||||||||||||||| ||||||||||| || || |||| |||| ||||| || |
Sbjct 1092 ACCGGAAAGGAAGTACAGTGTTTGGATCGGTGGCTCTAT-CTTGGCTTCTCTCAGTACTT 1150
Query 1061 TCCAGCAGATGTGGATCTCC-AAGGCTGAGTATGATGA 1097
|||||||||||||||| | | || || |||||||||||
Sbjct 1151 TCCAGCAGATGTGGAT-TGCGAAAGCCGAGTATGATGA 1187
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55622203860
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5