BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg343982 Length=1137 Score E Sequences producing significant alignments: (Bits) Value AT2G24220.1 | Symbols: ATPUP5, PUP5 | purine permease 5 | chr2:... 1735 0.0 > AT2G24220.1 | Symbols: ATPUP5, PUP5 | purine permease 5 | chr2:10300116-10301787 FORWARD LENGTH=1258 Length=1258 Score = 1735 bits (939), Expect = 0.0 Identities = 1068/1131 (94%), Gaps = 6/1131 (1%) Strand=Plus/Plus Query 1 ATGACAAGTTTCAAAGACGATAATCCCCAGTCAAATTTATCAGTCAGACTACTAATGGAT 60 ||||||| |||||||||||||||||| |||||||| || | | ||||||||||||||||| Sbjct 24 ATGACAACTTTCAAAGACGATAATCCTCAGTCAAA-TT-T-A-TCAGACTACTAATGGAT 79 Query 61 GAAACAACAGAACGCCCATCTGTTTCATTTTCATATTCAAATTGGATGTCTAATGTCAAG 120 |||||||||||||||||| ||||||| |||||||||||||||||||| || || |||| Sbjct 80 GAAACAACAGAACGCCCAACTGTTTCGTTTTCATATTCAAATTGGATATCAAACATCAAA 139 Query 121 AAATCGACACGAGAAGCTTACGAAGCAAAGCCCTTTTCACATTGGATACTCTTGCTCTTC 180 ||||| ||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct 140 AAATCAACACGAGAAGCTTACGAAGCAAAGCCCTTTTCACATTGGATTCTTTTGTTCTTC 199 Query 181 AGTGGTGCGGCAATGCTCATAGCTTTCCCGGCTTCTAGTTTACTGTCTCGTCTTTACTTT 240 ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| Sbjct 200 AGTGGTGCGGCAATGCTCATAGCTTTCCCAGCTTCTAGTCTACTCTCTCGTCTTTACTTC 259 Query 241 TCCAATGGTGGTAAAAGTAAATGGATAATCTCTTGGGTTGCTGTTGCTGGATGGCCAATC 300 ||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||| Sbjct 260 TCCAATGGTGGTAAAAGCAAATGGATCATTTCTTGGGTTGCTGTTGCTGGATGGCCAATC 319 Query 301 ACTTGTCTCATTTTACTTCCTACATATATCTTTCAAAAGATTAAACCAACACCCCTCAAT 360 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 320 ACTTGTCTTATTTTACTTCCTACATATATCTTTCAAAAGATCAAACCAACACCTCTCAAT 379 Query 361 GCAAAGCTTGTTCTCTCTTATGTCGTGCTTGGTTTCTTGAGTGCTGCAGATAACCTTATG 420 |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| Sbjct 380 ACAAAGCTTGTTCTCTCTTATGTTGTGCTCGGTTTCTTGAGTGCTGCAGACAACCTTATG 439 Query 421 TATGCTTATGCCTACGCGTATCTCCCTGCATCGACTTCTTCTCTACTAGCATCTTCGTCG 480 |||||||||||||| ||||| |||||||| |||||||||||||| || || ||||||||| Sbjct 440 TATGCTTATGCCTATGCGTACCTCCCTGCTTCGACTTCTTCTCTTCTGGCTTCTTCGTCG 499 Query 481 CTTGCCTTCTCTGCTTTGTTTGGCTATCTCATTGTTAAAAACCCGCTGAATGCTTCAGTT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 500 CTTGCCTTCTCTGCTTTGTTTGGCTATCTCATTGTTAAAAACCCGCTGAATGCTTCGGTT 559 Query 541 ATCAACTCCATTGTGATAATAACCGGTGCTATGGCTATAATAGCGCTGGATTCAAGCTCT 600 ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 560 ATCAACTCCATCGTGGTTATAACCGGTGCTATGGCTATAATAGCGCTGGATTCAAGCTCT 619 Query 601 GATCGGTATAGTTATATAAGCAACAGCCAATATTTTGCAGGTTTCTTTTGGGACATAATG 660 |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 620 GATCGGTACAGTTATATAAGCAACAGTCAATACTTTGCAGGTTTCTTTTGGGACATAATG 679 Query 661 GGATCTGCGCTTCACGGGCTCATTTTCGCGTTATCCGAGCTTCTCTTTGTGAAACTGCTT 720 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 680 GGATCTGCGCTTCACGGGCTCATTTTCGCGTTATCTGAGCTTCTCTTTGTGAAATTGCTT 739 Query 721 GGAAGAAGGTCCTTTCATGTTGCTTTGGAGCAGCAAGTCATGGTTTCGCTCATAGCTTTC 780 ||||||||||| ||||| ||||||||||||||||||||||||||||| |||| |||||| Sbjct 740 GGAAGAAGGTCTTTTCACGTTGCTTTGGAGCAGCAAGTCATGGTTTCTCTCACAGCTTTT 799 Query 781 GCGTTTACCACTCTTGGGATGGTTGTGAGCAACGATTTCCAAGGGATGAGTCAGGAAGCT 840 |||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 800 GCGTTTACCACTATTGGGATGGTTGTGAGCAATGATTTCCAAGGGATGAGTCACGAAGCT 859 Query 841 AAGAGTTTCAAAGGTGGCGAGTCTCTGTACACTCAGGTTCTTGTCTGGAGTGCAGTCACG 900 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 860 AAGAGTTTCAAAGGCGGTGAGTCTCTGTACACTCAGGTTCTTGTCTGGAGTGCAGTCACG 919 Query 901 TTTCAACTGGGTGTTCTTGGGGCGACCGCGGTCTTGTTTCTGGCATCCACAGTCATGGCA 960 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 920 TTTCAACTGGGTGTTCTTGGGGCGACCGCGGTCTTGTTTCTGGCATCCACAGTCATGGCT 979 Query 961 GGAGTCCTTAACGCCGTGAGAGTTCCCATCACGAGCATAGCCGCTGTTATATTGATGCAT 1020 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 980 GGAGTCCTTAACGCTGTGAGAGTTCCCATCACGAGCGTAGCCGCTGTTATATTGATGCAT 1039 Query 1021 GATCCAATGAGTGGCTTCAAAATCCTGTCTTTGGTCCTT-ACGTTCTGGGGATTCAGCTC 1079 ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 1040 GATCCAATGAGTGGCTTCAAAATCCTGTCTTTGGTT-TTGACGTTCTGGGGATTCAGCTC 1098 Query 1080 TTATATCTACGGGAGCTCGAGCTCAAACTCAAGTACTCAAGCTTCCTCTTC 1130 |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1099 TTATATCTACGGGAGCTCGAGCTCGAACTCAAGTACTCAAGCTTCCTCTTC 1149 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55772805495 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5