BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg344762 Length=1239 Score E Sequences producing significant alignments: (Bits) Value AT2G30040.1 | Symbols: MAPKKK14 | mitogen-activated protein kin... 1694 0.0 AT1G07150.1 | Symbols: MAPKKK13 | mitogen-activated protein kin... 453 2e-126 > AT2G30040.1 | Symbols: MAPKKK14 | mitogen-activated protein kinase kinase kinase 14 | chr2:12821710-12823169 FORWARD LENGTH=1460 Length=1460 Score = 1694 bits (917), Expect = 0.0 Identities = 1133/1234 (92%), Gaps = 27/1234 (2%) Strand=Plus/Plus Query 1 ATGGAGAAACAGAACATTATCACAAACA------CTTC-T--TCTTCTTGGATTCGTGGT 51 ||||||||||||||||||||| |||||| |||| | |||||||||||||||||| Sbjct 38 ATGGAGAAACAGAACATTATCTCAAACACTTCTTCTTCTTCGTCTTCTTGGATTCGTGGT 97 Query 52 TCTTGTATTGGACGAGGTTGTTTTGGTTCCGTTAGCAAAGCTTTGAGTAAAATCGACGGT 111 |||||| ||||| |||||||||||||| | || ||||||||||||||||||||||||||| Sbjct 98 TCTTGTGTTGGAAGAGGTTGTTTTGGTACAGTAAGCAAAGCTTTGAGTAAAATCGACGGT 157 Query 112 GGAGTTTTCGCCGTGAAGTCTATAGACCTCTCCACGTGTCTTCCTTCTCAAGCCGAGTCG 171 ||| |||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||| Sbjct 158 GGACTTTTCGCCGTGAAGTCGATAGATCTCGCCACGTGTCTTCCTTCTCAAGCAGAGTCG 217 Query 172 TTAGAGAACGAAATCGTTATTCTCCGGTCGATGAAGTCTCATCCAAACATAGTGAGGTTT 231 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 218 TTAGAGAACGAAATCGTTATTCTACGGTCGATGAAGTCTCATCCAAACATAGTGAGGTTT 277 Query 232 CTCGGCGATGACGTTTCTAAAGAAGGAACGACGTCGTTTCGTAATCTTCATTTAGAGTAT 291 ||||| ||||| || ||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 278 CTCGGTGATGATGTGTCTAAAGAAGGAACGGCGTCGTTTCGAAATCTTCATTTAGAGTAT 337 Query 292 TCACCGGAAGGTGACGTGGCAAACGGTGGAATTGTCAACGAAACGCTTCTCCGGCGTTAC 351 ||||||||||||||||| || ||||||||||| || ||||||||||||||| |||||||| Sbjct 338 TCACCGGAAGGTGACGTTGCTAACGGTGGAATCGTTAACGAAACGCTTCTCAGGCGTTAC 397 Query 352 GTGTGGTGTCTTGTCTCTGCTCTGAGTCACGTTCATGCTAACGGAATTGTTCACTGCGAC 411 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 398 GTGTGGTGTCTTGTCTCTGCTTTGAGTCACGTTCATTCTAACGGAATTGTTCACTGCGAC 457 Query 412 GTTAAATCTAAGAACGTTCTTGTGTTTAACGGTAGTAGCTCCGTTAAGCTGGCGGATTTT 471 ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| Sbjct 458 GTTAAATCTAAGAACGTTCTTGTTTTTAACGGTGGTAGCTCCGTTAAGCTAGCGGATTTT 517 Query 472 GGATCGGCGGTTGTGTTTGAGAAATCGACGGTTCAGGCTTCGCCACGTGGAAGTCCGCTT 531 ||||||||||||| |||||||||||| ||| |||| | |||||||||||||||||||||| Sbjct 518 GGATCGGCGGTTGAGTTTGAGAAATCTACGATTCATGTTTCGCCACGTGGAAGTCCGCTT 577 Query 532 TGGATGGCTCCGGAGGTGATTAGACGTGAGTACCAAGGACCGGAGAGTGACGTGTGGTCT 591 |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| Sbjct 578 TGGATGGCTCCGGAGGTGGTTAGAAGAGAGTACCAAGGACCGGAGAGTGACGTGTGGTCT 637 Query 592 TTAGGATGTACGGTCATAGAGATGCTCACCGGAAAACCAGCCTGGGAAGATCACGGTTTC 651 ||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 638 TTAGGGTGTACCGTCATCGAGATGCTCACCGGAAAACCAGCTTGGGAAGATCACGGTTTC 697 Query 652 GACTCGCTGAGTCGGATCGGGTTTTCTAACGAGTTGCCATTTATTCCGGCGGGATTATCG 711 ||||||||||||||||||||||| |||||||| ||||| |||||||||| ||| |||||| Sbjct 698 GACTCGCTGAGTCGGATCGGGTTCTCTAACGATTTGCCTTTTATTCCGGTGGGGTTATCG 757 Query 712 GAACTCGGGAGAGATTTCTTGGAGAAATGCTTGAAACGTGATCGGAGTCAGCGGTGGAGT 771 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 758 GAACTCGGGAGAGATTTCTTAGAGAAATGCTTGAAACGTGATCGGAGTCAGCGTTGGAGC 817 Query 772 TGTGATCAGCTTTTGCAGCATCCGTTTCTGTTTCAAGATCATCATGACTCGTTCTTGACC 831 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 818 TGTGATCAGCTCTTGCAGCATCCGTTTCTGTGTCAAGATCATCATGACTCGTTCTTCACT 877 Query 832 GAGTCGTCTCCGCGTTGCGTTCTTGACTGGGTCAACTCGGAGTTCGACGAAGAAGAAGAG 891 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 878 GAGTCGTCTCCGCGTTGTGTTCTTGACTGGGTCAACTCGGAGTTTGACGAAGAAGAAGAG 937 Query 892 AGCAACGAGTGGAGACCAGAATCCATGGTTTCAGCAATGGCAAGGATAAGTAAATTAGCG 951 ||| |||| ||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 938 AGCGACGAATGGAGACCAGAATCCATGGTTTCGGCGATGGCAAGGATAAGTAAATTAGCT 997 Query 952 ATAACCGGAGGGGCAAATTGGGAATCTAATGGTTGGACTGAGGTTAGAGACACTTCCGAA 1011 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 998 ATAACCGGAGGAGCAAATTGGGAATCTAATGGTTGGACTGAGGTTAGAGACACTTCCGAA 1057 Query 1012 GAGTCAGGGGCAATAAAGGAAGTTCCTGTTTCAACAAGGGTAGAATTGGGAT-TTAACAC 1070 ||||||| ||||| ||||||||||| |||||| ||||||||||||||| || ||| || Sbjct 1058 GAGTCAGAGGCAAAAAAGGAAGTTCTTGTTTCTCCAAGGGTAGAATTGGAATCTTA-CAT 1116 Query 1071 ATCATCGGAGTCGTCGAGCGATGATTTCGTAAGACAGCCG-GAAAATGAAGAGTCGGCGA 1129 ||||| ||||||||| |||||||||| ||||||||| ||| | || |||||||||||||| Sbjct 1117 ATCATTGGAGTCGTCAAGCGATGATTCCGTAAGACAACCGAGGAA-TGAAGAGTCGGCGA 1175 Query 1130 CGGAGTTGGCGTTGGCTA-TGACGTGTGAAGTAAT-T-GT-----AT--T---GGTGGTA 1176 |||||||||||| ||| | |||||||||||| ||| | || || | ||||||| Sbjct 1176 CGGAGTTGGCGTCGGC-AGTGACGTGTGAAGCAATATTGTTGGTGATGATATTGGTGGTA 1234 Query 1177 GAGAATATTCAGATATATGCCACGTTTTACACCA 1210 ||||||||||| |||||||||||||||||||||| Sbjct 1235 GAGAATATTCAAATATATGCCACGTTTTACACCA 1268 > AT1G07150.1 | Symbols: MAPKKK13 | mitogen-activated protein kinase kinase kinase 13 | chr1:2194279-2195796 REVERSE LENGTH=1518 Length=1518 Score = 453 bits (245), Expect = 2e-126 Identities = 828/1098 (75%), Gaps = 86/1098 (8%) Strand=Plus/Plus Query 31 TCTTCTTCTTGGATTCGTGGTTCTTGTATTGGAC-GAGGTTGTTTTGGTTCCGTTAGCAA 89 ||||||| |||| |||||||| | ||||| || | |||||||||| ||| | ||||| | Sbjct 76 TCTTCTTTTTGGGTTCGTGGTGCGTGTATCGG-CAGAGGTTGTTTCGGTGCAGTTAGTAC 134 Query 90 AGCTTTGAGTAAAATCGACGGTGGAGTTTTCGCCGTGAAGTCTATAGACCTCTCCACGTG 149 || | || |||| | |||||| ||||||||||||||| || | || ||| ||||| | Sbjct 135 GGCGATCAGCAAAACCAACGGTGAAGTTTTCGCCGTGAAATCCGTGGATCTCGCCACGAG 194 Query 150 TCTTCCTTCTCAAGCCGAGTCGT-TAGAGAACGAAATCGTTAT-TC-TCCGGTCGATGAA 206 ||| || ||||| | ||||| | | ||||||||||| | | || |||| ||| | || Sbjct 195 TCTCCCCACTCAATCAGAGTC-TCTCGAGAACGAAAT--ATCTGTCTTCCGCTCGCTAAA 251 Query 207 GTCTCATCCAAACATAGTGAGGTTTCTCGGCGA-TGACGTTTCTAAAGAAGGAACGACGT 265 | |||| || |||| |||| |||||||||||| || || || ||||||||||||||| Sbjct 252 GCCTCACCCTTACATCGTGAAGTTTCTCGGCGACGGA-GTCTCGAAAGAAGGAACGACGA 310 Query 266 CGTTTCGTAATCTTC-ATTTAGAGTATTCACCGGAA-GGTGACGT-G---G-CA-A-A-- 314 ||||| | |||| || | |||||||| || || || |||||||| | | || | | Sbjct 311 CGTTTAGGAATC-TCTACTTAGAGTA-TCTCCCAAACGGTGACGTGGCTAGTCACAGAGC 368 Query 315 CGGTGGAATTGTC--A-ACGAAACGCTTCTCCGGCGTTACGTGTG-GTGTCTTGTCTCTG 370 ||| |||| || | |||| || || |||| ||||||| | | |||||||||||||| Sbjct 369 CGGAGGAAAAATCGAAGACGAGACTCTGCTCCAGCGTTACACG-GCGTGTCTTGTCTCTG 427 Query 371 CTCTGAGTCACGTTCA-TGCT-AACGGAATT-GTTCACTGCGACGTTAAATCTAAGAACG 427 |||| | ||||| || | || || || ||| |||||||||||||| || | | |||| Sbjct 428 CTCTCCGCCACGTACACT-CTCAA-GG-ATTCGTTCACTGCGACGTCAAGGCGAGGAAC- 483 Query 428 TTCTTGTGTTTAACGGTAGTAGCTCC---GTTAAGCTGGCGGATTTTGGATCGGCGGTTG 484 || | | | | | | |||||| || ||| | || |||||||| ||||| ||| Sbjct 484 ATCCT-CG--TCA-GCCA-AAGCTCCATGGTCAAGTTAGCCGATTTTGGGTCGGC-GTTC 537 Query 485 TG-TTTGAGAAATCGACGGTTCAGGCT-TCGCCACGTGGAAGTCCGCTTTGGATGGCTCC 542 | | | | | ||| || || | | ||||||||||||||||||||||||||||||| Sbjct 538 AGAATCCACACACCGAGGGCTC-TGATCACGCCACGTGGAAGTCCGCTTTGGATGGCTCC 596 Query 543 GGAGGTGATTAGACGTGAGTACCAAGGACCGGAGAGTGACGTGTGGTCTTTAGGATGTAC 602 ||||||||| ||||| ||||||||||| |||||||||||||| |||||| | || || || Sbjct 597 GGAGGTGATCAGACGAGAGTACCAAGGTCCGGAGAGTGACGTCTGGTCTCTCGGCTGCAC 656 Query 603 GGTCATAGAGATGCTCACCGGAAAACCAGCCTGGGAAGATCACGGT-TTCGACTCGCTGA 661 | |||| |||||| |||| || ||||| || |||||||| ||||| || |||||||||| Sbjct 657 GATCATCGAGATGTTCACTGGGAAACCCGCTTGGGAAGACCACGGAATT-GACTCGCTGA 715 Query 662 GTCGGATCGGGTTT-TCTAACGAGTTGCCATTTATTCCGG-CGG-GATTATCGGAACTCG 718 |||| ||| | ||| ||| ||||||| || || |||| || | || |||||| ||| Sbjct 716 GTCGAATCAG-TTTCTCTGACGAGTTACCGGTT-TTCCCCTCGAAG-TTGTCGGAAATCG 772 Query 719 GGAGAGATTTCTTGGAGAAA-TG-CTTGAAACGTGATCGGAGTCAGCGGTGGAGTTGTGA 776 | | |||||| | || ||| || || ||| || || | || |||| |||||||||| || Sbjct 773 GCCGTGATTTCCTAGA-AAAGTGTCT-GAAGCGAGACCCGAATCAGAGGTGGAGTTGCGA 830 Query 777 TCAGCTTTTGCAGCATCCGTTTCTGTTTCAA-GATCATCATGACTCGT-TCTTGACCGAG 834 |||||||||||||||||| ||||| | ||| | ||| || |||| | || ||| ||| Sbjct 831 TCAGCTTTTGCAGCATCCATTTCTCTCTCAGTG-TCA-CA--ACTCATCTCC-GACTGAG 885 Query 835 TCGTCTCCGCGTTGCGTTCTTGACTGGGTCAACTCGGAGTTCGAC---GAAGAAGAAGA- 890 || |||||||||||||| ||||||||||||||||||| ||| ||| ||||||||||| Sbjct 886 TCATCTCCGCGTTGCGTACTTGACTGGGTCAACTCGGGGTTTGACTTAGAAGAAGAAGAA 945 Query 891 GAGCAACG-AGTGGAGACCAGAATCC-ATGGTTTCAGC-AATGGCAAGGATAAGTAAATT 947 ||| || | || ||||| |||||| | | | | || || ||||| || |||| || Sbjct 946 GAGGAA-GTAG-GGAGATCAGAATTCGAAGACG-CGGCGAA-GGCAATAATTTGTAATTT 1001 Query 948 AGCGATAACCGGAGGGGCAAATTGGGAATCTA-ATGGTTGGACTG-AGGTTAGA-GACAC 1004 |||| |||||||| | || |||||| || | |||||||| || | |||||| | ||| Sbjct 1002 GGCGACGACCGGAGGAGTAATTTGGGAGTC-AGATGGTTGGG-TGGAAGTTAGATGCCAC 1059 Query 1005 --TTCCGAAGAGTCAGGGGCAATAAAGGAAG-TTCCTGTTTCAACAAGGGTAGAATTGGG 1061 ||| |||||| |||| ||| || |||| ||| | | || |||||||||||| || Sbjct 1060 GCTTCGGAAGAGGAAGGGACAACAATGGAATATTCGGGATCCA-CAAGGGTAGAATCGGA 1118 Query 1062 ATTTAACACATCATCGGA 1079 || ||||||||||||||| Sbjct 1119 ATATAACACATCATCGGA 1136 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60893261085 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5