BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg345050 Length=1383 Score E Sequences producing significant alignments: (Bits) Value AT2G32930.2 | Symbols: ZFN2 | zinc finger nuclease 2 | chr2:139... 1888 0.0 > AT2G32930.2 | Symbols: ZFN2 | zinc finger nuclease 2 | chr2:13965758-13968957 REVERSE LENGTH=1998 Length=1998 Score = 1888 bits (1022), Expect = 0.0 Identities = 1258/1365 (92%), Gaps = 43/1365 (3%) Strand=Plus/Plus Query 1 ATGTCAGAAACTCAGCAGCAGGTTCAGAACTCTACTGGGTCGATTCGATCTCCCGAGAAA 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 539 ATGTCGGAAACTCAGCAGCAGGTTCAGAACTCTACTGGGTCGATTCGATCTCCCGACAAA 598 Query 61 ATTCAAGATACCTTCAGGAGGATGAAAGTTAATGAAGACAATATGGAGCAATCTAGTCCA 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 ATTGAAGATACCTTCAGGAGGATGAAAGTTAATGAAGACAATATGGAGCAATCTAGTCCA 658 Query 121 TATCCTGATCGTCCCGGTGAGCGAGATTGTCAGTTCTTTCTGAGAACTGGGCAGTGTGGC 180 |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 659 TATCCTGATCGTCCTGGTGAGCGAGATTGCCAGTTCTTTCTGAGAACTGGTCAGTGTGGC 718 Query 181 TATGGAAACACCTGTCGGTACAATCACCCTCTTACTCATCTTCCACAGGGTGTTATTTAT 240 ||||||||| | ||||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct 719 TATGGAAACTCTTGTCGATACAATCATCCTCTTACTAATCTTCCACAGGGTATTATTTAT 778 Query 241 TACAAAGACCAATTGCCTGAGAGGA-TTGGACAGCCTGACTGTGAGTATTTTCTGAAGAC 299 |||| ||||||||||||||||| || |||||||||||||| | | || |||| Sbjct 779 TACAGAGACCAATTGCCTGAGA-GAGTTGGACAGCCTGAC--T--G-------TG-AGAC 825 Query 300 AGGAGCCTGTAAGTATGGCCCAACATGTAAATATCACCACCC-AAAGGACAGGAATGGAG 358 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | Sbjct 826 AGGAGCCTGTAAGTATGGCCCAACATGTAAATATCACCACCCTAAA-GACAGGAATGGTG 884 Query 359 CTGGACCCGTGCTGTTCAATGTTCTCGGTTTTCCTATGCGACAGGGTGAGAAGTCATGCC 418 ||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||| | Sbjct 885 CTGGACCCGTGCTGTTCAATGTTCTCGGTTTGCCTATGCGGCAGGGTGAGAAGCCATGTC 944 Query 419 CGTATTACATGCAGACAGGATTGTGTCGATTCGGGGTTGCCTGCAAATTCCATCATCCTC 478 | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 945 CATATTACATGCAGACAGGATTGTGTCGATTCGGAGTTGCCTGCAAATTCCATCATCCTC 1004 Query 479 A---TC---CTCAGCCTTCTAATGGCCACTCTGCATATGCAATGTCCAGCTTTCCGTCTG 532 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1005 ATCCTCATTCTCAGCCTTCTAATGGCCACTCTGCATATGCAATGTCCAGCTTTCCGTCTG 1064 Query 533 TTGGTTTTCCTTATGCCAGTGGAATGACAATGGTGCCTTTGCCTCCTGCAACATATGGAG 592 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1065 TTGGTTTTCCTTATGCCAGTGGAATGACAATGGTGTCTTTGCCTCCTGCAACATATGGAG 1124 Query 593 CTATGGCACGTCCTCAAGTTCCTCAGTCTCAGGCCTATATGCCCTTCATGGTTGCACCTT 652 |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 1125 CTATTCCACGTCCTCAAGTTCCTCAGTCTCAGGCCTATATGCCCTACATGGTTGCACCCT 1184 Query 653 CCCAAGGCCTTATGCCTCCTCAAGGCTGGGCCACTTACATGGCTGCATCTAACCCCATTT 712 ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1185 CCCAAGGCCTTTTACCTCCTCAAGGCTGGGCCACTTACATGACTGCATCTAACCCCATTT 1244 Query 713 ACAGTGTGAAAGCTCAACTTGACTCCAGTTCTAGTGCATCGGTGCCTGTGGCCGTGACAT 772 ||| | ||||| ||||||| |||||||||||||| ||||||||| ||||| ||||||||| Sbjct 1245 ACAATATGAAAACTCAACTCGACTCCAGTTCTAGCGCATCGGTGGCTGTGACCGTGACAT 1304 Query 773 CACATCATCACAGTTTTTCTGAAAGAGCTGAATGTAGGTTTTTTATGAACACCGGAACAT 832 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1305 CACATCATCACAGTTTTTCTGAAAGAGCTGAATGTAGGTTTTTTATGAACACTGGAACTT 1364 Query 833 GTAAATATGGAGATGATTGCAAATACATTCATCCGAAAGAAAGGTTGTTACAATCACCAC 892 |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct 1365 GTAAATATGGTGATGATTGCAAATACAGTCATCCGAAAGAAAGATTGTTACAATCACCAC 1424 Query 893 CAAATCTCTTGAACCCTATTGTACTTCCCGCAAGACCAGGACAACCAGCATGTGGTAACT 952 ||| |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||| Sbjct 1425 CAACTCTCTTGAACCCTATTGTTCTTCCAGCAAGACCAGGACAGCCAGCATGTGGTAACT 1484 Query 953 TTAAGGCCTACGGATTCTGCAAGTTTGGAGCAAGCTGCAAATTTGATCACTCAATGCCAC 1012 | |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | Sbjct 1485 TCAAGGCCTACGGATTTTGCAAGTTTGGAGCAAACTGCAAATTTGATCACTCAATGCTGC 1544 Query 1013 TAAACCCTTATAACAATACGGGCTTGGCCATGTCTTCTCTGCCTACTCCTAATCCTTATG 1072 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1545 TAAACCCTTATAACAATACGGGCTTGGCCATGTCTTCTCTGCCTACTCCTTATCCTTATG 1604 Query 1073 CTCCACCTGTTTCAACTAATCTGAGGATCTCATCGCCACCAAGCCGCC-CTGAT-TCGAC 1130 |||||||||||||||||||| |||||||||||||||||||||||| || ||||| | ||| Sbjct 1605 CTCCACCTGTTTCAACTAATTTGAGGATCTCATCGCCACCAAGCC-CCTCTGATAT-GAC 1662 Query 1131 TACCCTATCCAATGGTAAACCCGCTGCTGCAGA-GACTCAAAGCTTGGAGACTGAGAAAC 1189 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 1663 TACCCTATCCAATGGTAAACCCGCTGCTGCAGAAG-CTCAAAGCTTGGAGACTGAGAAAC 1721 Query 1190 AAGACGATAGTCCTGCACAACCAGAAAAGTCAGAAGTGCAGGACTCATTGCCACCAAGCC 1249 ||||||||||||| || |||||||||| ||||||||| |||||||||||||||||| | Sbjct 1722 AAGACGATAGTCCAACAGAACCAGAAAAATCAGAAGTGGAGGACTCATTGCCACCAAACG 1781 Query 1250 GCTCTGATTCAACCTCCCTACCCAATGTTAAACCTGATTCTGAGAATCCGAGTTCAGAGA 1309 ||||||||||||||||||| ||||||| |||||||||| | | || ||| Sbjct 1782 GCTCTGATTCAACCTCCCTGCCCAATGATAAACCTGAT---G-----C--AG---AGA-- 1826 Query 1310 CTGAGAAACAAGACGATAATACTGCACAACCGGACAGCTCAAAAG 1354 ||||||||||||||||| || ||||| ||| |||||||||||||| Sbjct 1827 CTGAGAAACAAGACGATGATTCTGCAGAACTGGACAGCTCAAAAG 1871 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68122139565 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5