BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg346338 Length=2079 Score E Sequences producing significant alignments: (Bits) Value AT2G45340.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3332 0.0 > AT2G45340.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr2:18691722-18694725 FORWARD LENGTH=2352 Length=2352 Score = 3332 bits (1804), Expect = 0.0 Identities = 1990/2081 (96%), Gaps = 7/2081 (0%) Strand=Plus/Plus Query 1 ATGGcctctccactctcactctttctcatcctcttcttcttcttcttcctttctccttca 60 |||| |||||||||| ||||||||||||| | | |||||||||||||||||||| || || Sbjct 18 ATGGTCTCTCCACTCACACTCTTTCTCAT-C-C-TCTTCTTCTTCTTCCTTTCTTCTGCA 74 Query 61 ctgtcttcctcctcaTCGGAGCTTGACATTCTCCTCGATATCAAATCCTCTCTCGACCCT 120 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct 75 CTGTCTTCCTCCTCCTCAGAGCTCGACATTCTCCTCGATATCAAATCCTCTCTCGACCCT 134 Query 121 GAAAAACGTTTCCTTACTTCATGGACTCCCGACGCTGACCCTTGCTCCTCTGGCTCCTTC 180 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 135 GAAAAACGTTTCCTCACTTCATGGACTCCCGACGCCGACCCTTGCTCCTCTGGCTCCTTC 194 Query 181 GACGGTGTCGCTTGCGACGGAAACCGCCGTGTTGCTAACATCTCTCTTCAAGGAATGGGT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 195 GACGGTGTCGCGTGCGACGGAAACCGCCGTGTTGCTAACATCTCTCTTCAAGGAATGGGT 254 Query 241 CTCACTGGAACTATCCCTCCATCAATCGGTCTTCTCACTAGCTTAACTGGTTTATACCTT 300 |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct 255 CTCACTGGAACTATCCCTCCTTCAATCGGTCTTCTCACAAGCTTAACCGGTTTATACCTT 314 Query 301 CACTTCAACTCCTTGACCGGTCATATTCCTAAAGATATGTCAAATCTGCCTCTCCTCACC 360 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 315 CACTTCAACTCCTTGACCGGTCATATTCCTAAAGATATCTCAAATCTGCCTCTCCTCACC 374 Query 361 GATTTATACCTCAATGTCAACAATCTCTCCGGCGAAATCCCTCCTCAAATCGGAAACTTA 420 |||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| Sbjct 375 GATTTATACCTCAATGTCAACAATCTCTCCGGTGAAATCCCTCCTCTAATCGGGAACTTA 434 Query 421 GACAATCTTCAAGTTATACAGTTATGTTACAACAAGTTAAGTGGAAGTATACCGACACAG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 435 GACAATCTTCAAGTTATACAGTTATGTTACAACAAGTTAAGTGGAAGTATACCGACACAG 494 Query 481 TTAGGTTCTCTTAAGAAGATAACTGTCTTGGCTTTACAGTATAACCAACTCTCCGGCGCC 540 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 495 TTTGGTTCTCTTAAGAAGATAACTGTCTTGGCTTTACAGTATAACCAACTCTCCGGCGCC 554 Query 541 ATTCCGGCGAGTTTAGGTGATA-TAAGTACGTTAACGAGACTTGATTTGAGCTTCAACAA 599 ||||||||||||||||| |||| | | |||||||||||| |||||||||||||||||||| Sbjct 555 ATTCCGGCGAGTTTAGGCGATATTGA-TACGTTAACGAGGCTTGATTTGAGCTTCAACAA 613 Query 600 TCTCTTTGGTCCTGTGCCTGTGAAACTCGCCGGTGCTCCTTTGCTTGAAGTTCTCGACAT 659 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 614 CCTCTTTGGTCCTGTTCCGGTGAAACTCGCCGGTGCTCCTTTGCTTGAAGTTCTCGACAT 673 Query 660 TCGTAATAACTCTTTCTCAGGCTTCGTTCCCTTTGCTTTGAAGAGGCTAAACAATGGATT 719 |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 674 TCGTAATAACTCCTTCTCCGGCTTCGTTCCCTCTGCTTTGAAGAGGCTAAACAATGGATT 733 Query 720 CCAGTATTCAAACAATCACGGTTTATGCGGAGATGGGTTCACGGATTTGAATGCTTGCAC 779 |||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct 734 CCAGTATTCAAACAATCACGGTTTATGCGGAGATGGTTTCACTGATTTGAAAGCTTGCAC 793 Query 780 CGGTTTAAACGGTCCGAA-CCTAAACCGGCCAGACCCAACAAACCCAACGAATTTCACAA 838 ||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| Sbjct 794 CGGCTTAAACGGTCCGAACCCT-AACCGACCAGACCCAACAAACCCAACGAATTTCACAA 852 Query 839 CCGTTGACGTGAAACCAGAATCGGCAGATTTACAACGAAGCAATTGCAGTAACAACAATG 898 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 853 CAGTTGACGTGAAACCAGAATCAGCAGATTTACAACGAAGCAATTGCAGTAACAACAATG 912 Query 899 GCGGGTGTTCATCAAAAACCTCAAAGTCTTCACCTTTAGGAATCGTCATGGGTCTTATGG 958 ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| || | Sbjct 913 GCGGGTGTTCATCAAAATCCTTAAAGTCTTCACCTTTAGGAATCGTCATGGGTCTAATAG 972 Query 959 GTTCAATCCTCGCAGTTGCAATCTTTGGTGGTTCAACATTCACATGGTACAGACGAAGGA 1018 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 973 GATCAATCCTCGCAGTTGCAATCTTTGGCGGTTCAACATTCACATGGTACAGACGAAGGA 1032 Query 1019 AACAAAAGATTGGAAGCAGTCTTGATGCAATGGACGGTAGGATTAGCACTGAGTACAACT 1078 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1033 AACAGAAGATTGGAAGCAGTCTTGATGCAATGGACGGTAGGATTAGTACTGAGTACAACT 1092 Query 1079 TCAAAGAAGTTTCTAGAAGAAAAAGCTCTTCTCCATTGATCAGCCTAGAGTATGCAAGTG 1138 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 1093 TCAAAGAAGTTTCTAGAAGAAAAAGCTCTTCTCCATTGATCAGCTTAGAGTACGCAAGTG 1152 Query 1139 GTTGGGATCCGTTAGGACGAGGACAGAGCAGTAACAACAACAGTGCATTGTCTCAAGAAG 1198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1153 GTTGGGATCCGTTAGGACGAGGACAGAGCAGTAACAACAACAGTGCATTGTCTCAAGAAG 1212 Query 1199 TCTTTGAGAGCTTTATGTTCAATCTTGAGGAGATTGAGAGAGCTACTCAGAGCTTCTCTG 1258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1213 TCTTTGAGAGCTTTATGTTCAATCTTGAGGAGATTGAGAGAGCTACTCAGAGCTTCTCTG 1272 Query 1259 AGGTTAACTTGTTGGGGAAGAGTAATGTATCTTCGGTTTATAAAGGTATCCTTAGAGATG 1318 || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 1273 AGATTAACTTGTTGGGGAAGAGTAATGTCTCTTCAGTTTATAAAGGTATCCTTAGAGATG 1332 Query 1319 GTTCTGTTGCAGCTGTAAAATGTATAGCGAAATCGAGCTGTAAATCCGATGAATCCGAGT 1378 |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1333 GTTCTGTTGCAGCTATCAAATGTATAGCTAAATCGAGCTGTAAATCCGATGAATCCGAGT 1392 Query 1379 TTCTCAAAGGGTTGAAGACGCTGACATTGTTGAAGCATGAGAATTTAGTGAGGTTGAGAG 1438 |||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| Sbjct 1393 TTCTCAAAGGGTTGAAGATGCTGACACTGTTGAAGCATGAGAATTTAGCGAGGTTGAGAG 1452 Query 1439 GATTCTGCTGCTCAAAAGGACGTGGAGAATGTTTCCTTATCTATGAGTTTGTCCCCAATG 1498 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1453 GATTCTGCTGCTCGAAAGGACGTGGAGAATGTTTCCTTATCTATGAGTTTGTTCCCAATG 1512 Query 1499 GTAATCTTTTGCAGTATCTTGATGTGAAGGATGAGACTGGAGAGGTTCTCGAATGGACAA 1558 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct 1513 GTAATCTTTTGCAGTATCTTGATGTGAAGGATGAGACTGGAGAGGTTCTTGAATGGGCAA 1572 Query 1559 CTCGAGTTTCCATCATTAATGGCATCGCCAGAGGGATTGTTTACCTACATGGAGAAAATG 1618 |||||||||||||||| || || ||||||||||||||||| ||| | ||||||||||||| Sbjct 1573 CTCGAGTTTCCATCATAAACGGAATCGCCAGAGGGATTGTGTACTTGCATGGAGAAAATG 1632 Query 1619 GAAACAAGCCTGCAATAGTTCACCAGAATCTATCTGCAGAGAAGATTCTCATTGATCATT 1678 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1633 GGAACAAACCTGCAATAGTTCACCAGAATCTATCTGCAGAGAAGATTCTCATTGATCACT 1692 Query 1679 GGTATAATCCTTCTCTTGCGGATTCCGGTCTTCACAAGCTTTTCACGGATGACATCGTTT 1738 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct 1693 GGTATAATCCTTCTCTTGCAGATTCCGGTCTTCACAAGCTTTTCACAGATGATATCGTTT 1752 Query 1739 TCTCGAAGCTCAAAGCAAGTGCGGCAATGGGATACTTAGCTCCTGAGTACATAACTACAG 1798 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1753 TCTCGAAGCTCAAAGCAAGTGCGGCAATGGGATACTTAGCTCCTGAGTACATAACTACAG 1812 Query 1799 GGAGGTTTACTGATAAGAGCGACGTGTATGCCTTTGGTATGATTCTGTTGCAGATACTGA 1858 ||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct 1813 GGAGGTTCACTGATAAGAGCGATGTTTATGCATTTGGTATGATTCTGTTGCAGATACTGA 1872 Query 1859 GTGGTAAAAGCAAAATCAGCCATTTGATGATCTTACAAGCTGTAGAGTCAGGAAGACTGA 1918 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1873 GTGGTAAAAGCAAAATCAGCCATTTGATGATCTTACAAGCTGTAGAGTCAGGAAGACTGA 1932 Query 1919 ATGAAGACTTCATGGATCCAAATCTTCGAAAGAACTTCCCGGAAGCAGAAGCAGCTGAGC 1978 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| Sbjct 1933 ATGAAGACTTCATGGATCCAAATCTTCGAAAGAACTTCCCGGAAGTAGAAGCGGCTCAGC 1992 Query 1979 TCGCTAGACTTGGTCTTCTCTGCACCCATGAATCCTCAAACCAGAGACCATCCATGGAAG 2038 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 1993 TCGCTAGACTTGGTCTTCTCTGCACTCATGAATCCTCAAACCAAAGACCATCCATGGAAG 2052 Query 2039 ACGTTATGCAAGAACTGAACAAACTCGCAGCGAATTATTAG 2079 | ||||| ||||||||||| || ||||| ||| |||||||| Sbjct 2053 ATGTTATCCAAGAACTGAATAATCTCGCCGCGGATTATTAG 2093 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 103061718885 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5