BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg347932 Length=2055 Score E Sequences producing significant alignments: (Bits) Value AT3G48425.1 | Symbols: | DNAse I-like superfamily protein | ch... 1718 0.0 AT3G48420.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 1478 0.0 > AT3G48425.1 | Symbols: | DNAse I-like superfamily protein | chr3:17931818-17934744 FORWARD LENGTH=1438 Length=1438 Score = 1718 bits (930), Expect = 0.0 Identities = 1063/1128 (94%), Gaps = 5/1128 (0%) Strand=Plus/Plus Query 930 TCTCCAGAAACACCACGAAATTGCTAAAGCTATGAAGCGATTCTTTAAGCCCATAGAGAA 989 |||||| ||| | |||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 63 TCTCCATAAA-GCTACGAAATTGCTATAGCTATGAAGCGATTCTTCAAGCCCATAGAGAA 121 Query 990 GGAGGGTTCAACGGCGGCTAAGAAACCCTGCCTCTCGCCGGAAAAGCGTAAAGGAGACGG 1049 |||| ||| |||||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct 122 GGAGAATTCTCCGGCGGCTAAGAAACCCTGCCTTTCGCCGGAAAAGCGTGACGGAGACGG 181 Query 1050 AGATGGAGTTGAAGAAGAGAAGAACCAGAAAGAGCCGTCCAAGTTTGTGACGTGGAACGC 1109 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 182 AGATGGAGTTGAAGAAGAGAAGAACCAGAACGAGCCGTCCAAGTTTATGACGTGGAACGC 241 Query 1110 TAATAGCTTCCTCCTTCGGGTGAAGAATGACTGGTCTCAGTTCTCTAAGTTCGTCTCCGA 1169 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 242 TAATAGCTTCCTCCTTCGGGTGAAAAATGACTGGTCTCAGTTCTCTAAGTTCGTCTCCGA 301 Query 1170 TTTTGACCCGGATGTCATCGCCGTACAGGAAGTAAGAATGCCTGCTGCTGGTGGGAAGGG 1229 ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct 302 TTTTGACCCCGATGTCATCGCCATACAGGAAGTAAGGATGCCTGCTGCTGGTGGAAAGGG 361 Query 1230 AAAACCAAAAAATCC-TGAAGAGTTGAGCGATGACACGAAAGTTCTGCGTGAGGAAAAAC 1288 |||||| ||||| || |||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 362 AAAACCTAAAAA-CCATGAAGAGTTGAGTGATGACACGAAAGTTTTGCGTGAGGAAAAAC 420 Query 1289 AGATTTTGACAAGGGCTCTCTCAAGTCCACCTTTTGGAAATTATCGAGTTTGGTGGTCTC 1348 ||||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||||| Sbjct 421 AGATTTTGACACGGGCTCTCTCAAGTCCACCATTTGGAAATTATGGGGTTTGGTGGTCTC 480 Query 1349 TCGCAGACTCAAAGTATGCAGGGACAGCTTTGTTAATGAAAAAATGTTTCAAGCC-CAAG 1407 |||| ||||| |||||||||||||||||||||||| ||||||||||||||||||| | | Sbjct 481 TCGCGGACTCGAAGTATGCAGGGACAGCTTTGTTAGTGAAAAAATGTTTCAAGCCTCGA- 539 Query 1408 AAAGTTTACTTTAACCTGGACAAATTAGCATCTAAACATGAGCCTGATGGTCGTGTTATC 1467 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct 540 AAAGTTTACTTTAACTTGGACAAATTAGCATCTAAACATGAACCTGATGGTCGTGTTATC 599 Query 1468 TTAGCTGAATTTGAGACATTTCGCCTTTTAAATACGTATTCACCTAACAATGGTTGGAAA 1527 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct 600 TTAGCTGAATTTGAGACATTTCGTCTTTTGAATACGTATTCGCCTAACAATGGTTGGAAA 659 Query 1528 GATGAGGAGAATTCGTTTCAGAGGAGAAGAAAATGGGACAAGAGGATTGTTGAGTTCCTC 1587 ||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 660 GATGAAGAGAATGCGTTTCAGAGGAGAAGAAAATGGGACAAGAGGATTGTTGAATTCCTC 719 Query 1588 AACAAAACATCTGATAAACCTCTGATATGGTGTGGCGACTTAAATGTCAGTCATGAGGAG 1647 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 720 AACAAAACATCTGATAAACCGCTAATATGGTGTGGCGACTTAAATGTCAGTCATGAGGAG 779 Query 1648 ATAGATGTTAGCCACCCAGAGTTTTTCGCAACAGCAAAGCTTAATGGTTATGTTCCTCCA 1707 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 780 ATAGATGTTAGCCACCCAGAATTTTTTGCTACAGCAAAGCTTAATGGTTATGTTCCTCCA 839 Query 1708 AACAAAGAGGACTGTGGACAGCCTGGATTTACACCATCTGAGAGACGACGCTTTGGGGCA 1767 |||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| Sbjct 840 AACAAAGAGGACTGCGGACAGCCTGGATTTACACCATCTGAGAGAGGACGCTTCGGGGCA 899 Query 1768 ACTATGAAAGAAGGAAGGCTTGTTGATGCATACCGGTATTTACACAAGGAGCAAGACATG 1827 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct 900 ACTATAAAAGAAGGAAGGCTTGTTGATGCATACCGGTATCTACACAAGGAGCAAGAAATG 959 Query 1828 GAAAGTGGTTTCTCATGGTCGGGGAATCCCATTGGAAAGTACCGCGGAAAGAGGATGAGG 1887 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 960 GAAAGTGGCTTCTCATGGTCGGGGAATCCCATTGGAAAGTACCGGGGAAAGAGGATGAGG 1019 Query 1888 ATCGACTATTTTCTGGTATCTGAACAACTCAAAGACCGTATAGTTTCTTGTAAGATGCAC 1947 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 ATCGACTATTTTCTGGTCTCTGAACAACTCAAAGACCGTATAGTTTCTTGTAAGATGCAC 1079 Query 1948 GGTCGTGGGATAGAACTAGAAGGTTTCTATGGGAGTGATCATTGTCCGGTTACACTGGAG 2007 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| Sbjct 1080 GGTCGTGGGATAGAACTTGAAGGTTTCCATGGGAGTGATCATTGTCCGGTTACACTCGAG 1139 Query 2008 CTTTCAAAGCCATCTTTAGAAACGGAACAGAACCAGGTTTCTAACTAA 2055 ||||| |||||||||| ||||| ||||||||||||||| || |||||| Sbjct 1140 CTTTCGAAGCCATCTTCAGAAATGGAACAGAACCAGGTGTCAAACTAA 1187 > AT3G48420.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr3:17929647-17931701 FORWARD LENGTH=1206 Length=1206 Score = 1478 bits (800), Expect = 0.0 Identities = 900/948 (95%), Gaps = 8/948 (1%) Strand=Plus/Plus Query 1 ATGGCCACTGTGAAAATCTCTCTTTCCTTTGTTTCACTATCACCA---TCTTCTTCTTCT 57 ||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||| Sbjct 97 ATGGCCACTGTGAAAATCTCTCTTTCCTTGGCTTCGCTATCACCATCTTCTTCTTCTTCT 156 Query 58 TCAACTCAATCTAAGCTATCTCCATCTTTCATCCCCAATGCAGCACCTTC---GCCGGCT 114 |||| |||||||||| |||| ||||||||||| |||||||| |||||| | | ||| | Sbjct 157 TCAATTCAATCTAAGTTATCACCATCTTTCATTCCCAATGCGGCACCTGCAAAGGCGG-T 215 Query 115 -AAGTTGCGATTCAATGGTAAGTGCCTGAGAGCAAAACCAATGGTACACAGAGCATCTCG 173 ||||||||||||||||| |||| |||||||||||||||||||||| ||||| ||||||| Sbjct 216 GAAGTTGCGATTCAATGGAAAGTCCCTGAGAGCAAAACCAATGGTATACAGATCATCTCG 275 Query 174 CTCCGGCGGATTCACCTGCTCTGCTTCATCTTCTCCGACGACTCTTCCCTCTGCTCTTCT 233 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 276 CTCCGTTGGAGTCACCTGCTCTGCTTCATCTTCTCTGACGACTCTTCCCTCTGCTCTTCT 335 Query 234 CTTCGATTGCGATGGCGTTCTTGTTGATACCGAAAAGGACGGTCACAGAATCTCCTTCAA 293 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 336 CTTCGATTGCGATGGCGTTCTTGTTGATACCGAGAAGGACGGTCACAGGATCTCCTTCAA 395 Query 294 CGACACTTTCAAAGAGAGAGAATTGGATGTTACTTGGGATGTTGATTTATACGGCGAGCT 353 ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||| | Sbjct 396 CGACACTTTCAAAGAGAGAGATTTGAATGTTACGTGGGATGTTGATTTATACGGCGAGTT 455 Query 354 ACTTAAAATCGGTGGTGGTAAAGAAAGGATGACGGCGTATTTTAACAAGGTTGGTTGGCC 413 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 456 ACTTAAAATCGGTGGTGGTAAAGAAAGGATGACTGCGTATTTTAACAAGGTTGGTTGGCC 515 Query 414 AGAGAAAGCTCCTAAAGATGAAGCAGAGAGGAAAGAGTTCATAGCTGGACTTCACAAGCA 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 516 AGAGAAAGCTCCTAAAGATGAAGCAGAGAGGAAAGAGTTCATAGCTGGACTTCACAAGCA 575 Query 474 GAAGACTGAGCTTTTCATGGTTCTCATCGAGAAAAAATTGCTTCCACTTCGACCCGGTGT 533 |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||| Sbjct 576 GAAGACTGAGCTTTTCATGGTTCTTATCGAGAAAAAGCTGCTTCCGCTTCGACCCGGTGT 635 Query 534 TGCAAAGTTGGTTGATCAAGCTTTAACGAACGGAGTAAAAGTAGCTGTGTGCAGCACTTC 593 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct 636 TGCAAAGTTGGTTGATCAAGCTTTAACAAACGGAGTCAAAGTAGCTGTGTGCAGTACTTC 695 Query 594 AAATGAGAAGGCGGTTTCTGCTATAGTTTCATGCTTGCTTGGACCAGAACGAGCAGAGAA 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 696 AAATGAGAAGGCGGTTTCTGCTATAGTTTCATGCTTGCTTGGACCAGAACGAGCAGAGAA 755 Query 654 AATCAAGATATTCGCAGGAGATGTAGTCCCCAAAAAGAAACCTGACCCGGCCATCTACAA 713 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| Sbjct 756 AATCAAGATATTCGCAGGAGACGTAGTCCCCAAAAAGAAACCTGATCCAGCCATCTACAA 815 Query 714 CTTAGCAGCTGAAACCCTTGGAGTTGATCCCTCAAAATGTGTTGTGGTTGAAGACAGCGC 773 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 816 CTTAGCAGCTGAAACCCTTGGAGTTGATCCCTCAAAATGTGTAGTGGTTGAAGACAGCGC 875 Query 774 GATCGGGCTAGCAGCTGCAAAAGCTGCGGGAATGACTTGTATAGTCACAAAGAGTGGATA 833 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 876 GATCGGGCTAGCAGCTGCAAAAGCTGCGGGAATGACTTGTATAGTTACAAAGAGTGGATA 935 Query 834 CACGGCGGATGAAGATTTCGAGAACGCAGATGCGGTTTTCGACTGCATTGGAGACCCTCC 893 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 936 CACGGCTGATGAAGATTTCGAGAACGCAGATGCGGTTTTCGACTGCATTGGAGACCCTCC 995 Query 894 GGAAGAGAGATTTGATTTGGCATTCTGTGGAAGTCTTCTCCAGAAACA 941 |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 996 AGAAGAGAGATTTGATTTGGCATTCTGTGGAAGTCTTCTCCGGAAACA 1043 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 101856905805 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5