BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg349416 Length=1347 Score E Sequences producing significant alignments: (Bits) Value AT5G01930.1 | Symbols: MAN6, AtMAN6 | Glycosyl hydrolase superf... 2266 0.0 AT5G01920.1 | Symbols: STN8 | Protein kinase superfamily protei... 752 0.0 > AT5G01930.1 | Symbols: MAN6, AtMAN6 | Glycosyl hydrolase superfamily protein | chr5:361081-362901 REVERSE LENGTH=1489 Length=1489 Score = 2266 bits (1227), Expect = 0.0 Identities = 1307/1347 (97%), Gaps = 0/1347 (0%) Strand=Plus/Plus Query 1 ATGAAGGACCAACTTGGATTCAGAATCGTGCTCTGTTCTGCGATTTTCATAATTCTGACA 60 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct 35 ATGAAGGACCAACTTGGATTCAGAATTGTGCTCTGTTCTGCGGTTTTCATAATTCTGACT 94 Query 61 CAAAACAGAGCTCTCGCAGACTTGGACAGCGAGTCCCACGGGGTTAACTCAGAATCAGTA 120 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| Sbjct 95 CAAAACAGAGCTCTCGCAGACTTGGACAGCGAGTCCCATGAGGTTAACTCAGAATCGGTA 154 Query 121 GGAGAAGAAGAATGGGAGATGGTGCAGAGGAAAGGGATGCAATTCACCCTAAATGGACAA 180 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 155 GGAGAAGAACAATGGGAGATGGTGCAGAGGAAAGGGATGCAATTCACTCTAAATGGACAA 214 Query 181 CCATTCTATGTGAATGGCTTCAACACGTACTGGATGATGACTCTTGCAGCTGACAATTCC 240 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 215 CCATTCTATGTGAATGGCTTCAACACATACTGGATGATGACTCTTGCAGCTGACAATTCC 274 Query 241 ACGAGAGGCAAAGTGACGGAAGTGTTCCAACAAGCCTCCGCGGTTGGAATGACAGTAGGC 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 275 ACGAGAGGCAAAGTGACGGAAGTGTTCCAACAAGCCTCTGCGGTTGGAATGACGGTAGGC 334 Query 301 AGGACATGGGCTTTCAACGACGGCCAATGGAGAGCTCTCCAGAAATCTCCCTCTGTTTAC 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 335 AGGACATGGGCTTTCAACGATGGCCAATGGAGAGCTCTCCAGAAATCTCCCTCTGTTTAC 394 Query 361 GATGAAGAGGTCTTCAAGGCCCTCGACTTCGTGGTGAGCGAGGCCAGAAAGTACAAGATC 420 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 395 GATGAAGAGGTCTTCAAGGCCCTCGACTTCGTGCTGAGCGAGGCCAGAAAGTACAAAATC 454 Query 421 AGGCTTATACTGTCATTGGTCAACAACTGGGACGCCTATGGCGGCAAAGCTCAGTACGTT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 455 AGGCTTATACTGTCATTGGTCAACAACTGGGACGCCTATGGCGGCAAAGCTCAGTACGTT 514 Query 481 AAATGGGGCAACGCCTCCGGCCTTAATCTCACCTCCGACGACGACTTCTTCACCAACCCC 540 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 515 AAATGGGGAAACGCCTCCGGCCTTAATCTCACTTCCGATGACGACTTCTTCACCAACCCC 574 Query 541 ACCCTCAGAAACTTCTACCAATCCCATGTCCGGACAGTGCTGAATAGAGTCAACACCTTC 600 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 575 ACCCTCAGAAACTTCTACCAATCCCATGTCCGGACAGTGCTGAATAGAGTGAACACCTTC 634 Query 601 ACAAACATAACTTACAAGAACGACCCCACCATCTTCGCCTGGGAACTCATGAATGAGCCT 660 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 635 ACAAACATAACTTACAAGAACGACCCCACAATCTTCGCCTGGGAACTTATGAATGAGCCT 694 Query 661 CGTTGCCCCTCTGATCCCTCTGGTGACAAACTCCAGTCTTGGATACAAGAAATGGCGGTG 720 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct 695 CGTTGCCCCTCTGATCCTTCCGGCGACAAACTCCAGTCTTGGATACAAGAAATGGCGGTG 754 Query 721 TTTGTGAAGAGCTTAGACGCTAAACATTTGGTGGAGATCGGACTTGAAGGCTTCTATGGT 780 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 755 TTTGTGAAGAGCTTAGACGCTAAACACTTGGTGGAGATCGGACTTGAAGGCTTCTATGGT 814 Query 781 CCCTCTGCCCCTGTGAGAACCAGATTCAATCCCAATCCCTACGCTGCACAAGTCGGAACT 840 ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 815 CCCTCTGCCCCTGCGAGAACCAGATTCAACCCCAACCCCTACGCTGCACAAGTCGGAACT 874 Query 841 GACTTCATCAGAAATAATCAGGTTCTTGGCATCGATTTTGCTTCGGTTCACGTCTATCCA 900 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 875 GACTTCATCAGAAATAATCAGGTTCTTGGCATTGATTTTGCCTCGGTTCACGTCTATCCA 934 Query 901 GATTCCTGGATATCTCCGGCAGTATCAAATTCTTTCCTGGAATTCACTAGCTCTTGGATG 960 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 935 GATTCCTGGATATCTCCGGCAGTATCAAATTCTTTCCTGGAATTCACAAGCTCTTGGATG 994 Query 961 CAAGCTCATGTGGAGGACGCAGAGATGTACTTGGGAATGCCGGTTCTGTTCACAGAGTTT 1020 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 995 CAAGCTCATGTTGAGGACGCAGAGATGTACTTGGGAATGCCGGTTCTGTTCACAGAGTTT 1054 Query 1021 GGTGTGTCTGCACATGACCCTGGTTTCAACACGTCTTTCCGCGACATGATGTTGAATACG 1080 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 1055 GGTGTGTCTGCACATGACCCTGGTTTCAACACGTCTTTCCGTGACATGATGTTGAACACA 1114 Query 1081 GTGTACAAGATGACCCTCAACTCAACAAGGAAAGGAGGGGCTGGTGCCGGGAGTCTGGTC 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1115 GTGTACAAGATGACCCTCAACTCAACAAGGAAAGGAGGGGCTGGTGCCGGGAGTCTGGTC 1174 Query 1141 TGGCAGGTCTTCCCTCAGGGGGCAGAGTTCATGGATGACGGCTATGCGGTTTACCTCACA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1175 TGGCAGGTCTTCCCTCAGGGGGCAGAGTTCATGGATGACGGCTATGCGGTTTACCTCACA 1234 Query 1201 AGAGCTCACACCGCTTCAAAAATCATATCTCTGCAGTCGAAGCGACTAGCCATCTTCAAC 1260 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1235 AGAGCTCACACAGCTTCAAAAATCATATCTCTGCAGTCAAAGCGACTAGCCATCTTCAAC 1294 Query 1261 TCCTTGTGTAGCTGGAGATGCAGGTGGGGATGCAAGAAAAAGAATCACACTGCTCTTGAT 1320 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 1295 TCCTTGTGTAGCTGGAGATGCAGATGGGGATGCAAGAAAAAGAATCAGACTGCTCTTGAT 1354 Query 1321 GCCCTCCTGACGCACGACGAGCTTTAA 1347 |||||||| ||||||||||||||||| Sbjct 1355 GCCCTCCTCTCGCACGACGAGCTTTAA 1381 > AT5G01920.1 | Symbols: STN8 | Protein kinase superfamily protein | chr5:359107-362904 FORWARD LENGTH=3489 Length=3489 Score = 752 bits (407), Expect = 0.0 Identities = 429/440 (98%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 908 GGATATCTCCGGCAGTATCAAATTCTTTCCTGGAATTCACTAGCTCTTGGATGCAAGCTC 967 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2213 GGATATCTCCGGCAGTATCAAATTCTTTCCTGGAATTCACAAGCTCTTGGATGCAAGCTC 2154 Query 968 ATGTGGAGGACGCAGAGATGTACTTGGGAATGCCGGTTCTGTTCACAGAGTTTGGTGTGT 1027 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2153 ATGTTGAGGACGCAGAGATGTACTTGGGAATGCCGGTTCTGTTCACAGAGTTTGGTGTGT 2094 Query 1028 CTGCACATGACCCTGGTTTCAACACGTCTTTCCGCGACATGATGTTGAATACGGTGTACA 1087 |||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| Sbjct 2093 CTGCACATGACCCTGGTTTCAACACGTCTTTCCGTGACATGATGTTGAACACAGTGTACA 2034 Query 1088 AGATGACCCTCAACTCAACAAGGAAAGGAGGGGCTGGTGCCGGGAGTCTGGTCTGGCAGG 1147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2033 AGATGACCCTCAACTCAACAAGGAAAGGAGGGGCTGGTGCCGGGAGTCTGGTCTGGCAGG 1974 Query 1148 TCTTCCCTCAGGGGGCAGAGTTCATGGATGACGGCTATGCGGTTTACCTCACAAGAGCTC 1207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1973 TCTTCCCTCAGGGGGCAGAGTTCATGGATGACGGCTATGCGGTTTACCTCACAAGAGCTC 1914 Query 1208 ACACCGCTTCAAAAATCATATCTCTGCAGTCGAAGCGACTAGCCATCTTCAACTCCTTGT 1267 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1913 ACACAGCTTCAAAAATCATATCTCTGCAGTCAAAGCGACTAGCCATCTTCAACTCCTTGT 1854 Query 1268 GTAGCTGGAGATGCAGGTGGGGATGCAAGAAAAAGAATCACACTGCTCTTGATGCCCTCC 1327 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1853 GTAGCTGGAGATGCAGATGGGGATGCAAGAAAAAGAATCAGACTGCTCTTGATGCCCTCC 1794 Query 1328 TGACGCACGACGAGCTTTAA 1347 | ||||||||||||||||| Sbjct 1793 TCTCGCACGACGAGCTTTAA 1774 Score = 556 bits (301), Expect = 1e-157 Identities = 328/341 (96%), Gaps = 1/341 (0%) Strand=Plus/Minus Query 573 GACAGTGCTGAATAGAGTCAACACCTTCACAAACATAACTTACAAGAACGACCCCACCAT 632 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 2646 GACAGTGCTGAATAGAGTGAACACCTTCACAAACATAACTTACAAGAACGACCCCACAAT 2587 Query 633 CTTCGCCTGGGAACTCATGAATGAGCCTCGTTGCCCCTCTGATCCCTCTGGTGACAAACT 692 ||||||||||||||| ||||||||||||||||||||||||||||| || || |||||||| Sbjct 2586 CTTCGCCTGGGAACTTATGAATGAGCCTCGTTGCCCCTCTGATCCTTCCGGCGACAAACT 2527 Query 693 CCAGTCTTGGATACAAGAAATGGCGGTGTTTGTGAAGAGCTTAGACGCTAAACATTTGGT 752 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2526 CCAGTCTTGGATACAAGAAATGGCGGTGTTTGTGAAGAGCTTAGACGCTAAACACTTGGT 2467 Query 753 GGAGATCGGACTTGAAGGCTTCTATGGTCCCTCTGCCCCTGTGAGAACCAGATTCAATCC 812 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 2466 GGAGATCGGACTTGAAGGCTTCTATGGTCCCTCTGCCCCTGCGAGAACCAGATTCAACCC 2407 Query 813 CAATCCCTACGCTGCACAAGTCGGAACTGACTTCATCAGAAATAATCAGGTTCTTGGCAT 872 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2406 CAACCCCTACGCTGCACAAGTCGGAACTGACTTCATCAGAAATAATCAGGTTCTTGGCAT 2347 Query 873 CGATTTTGCTTCGGTTCACGTCTATCCAGATTCCTGGATAT 913 |||||||| ||||||||||||||||||||||||||| ||| Sbjct 2346 TGATTTTGCCTCGGTTCACGTCTATCCAGATTCCTGG-TAT 2307 Score = 477 bits (258), Expect = 1e-133 Identities = 272/279 (97%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 101 GGGTTAACTCAGAATCAGTAGGAGAAGAAGAATGGGAGATGGTGCAGAGGAAAGGGATGC 160 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 3275 GGGTTAACTCAGAATCGGTAGGAGAAGAACAATGGGAGATGGTGCAGAGGAAAGGGATGC 3216 Query 161 AATTCACCCTAAATGGACAACCATTCTATGTGAATGGCTTCAACACGTACTGGATGATGA 220 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 3215 AATTCACTCTAAATGGACAACCATTCTATGTGAATGGCTTCAACACATACTGGATGATGA 3156 Query 221 CTCTTGCAGCTGACAATTCCACGAGAGGCAAAGTGACGGAAGTGTTCCAACAAGCCTCCG 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3155 CTCTTGCAGCTGACAATTCCACGAGAGGCAAAGTGACGGAAGTGTTCCAACAAGCCTCTG 3096 Query 281 CGGTTGGAATGACAGTAGGCAGGACATGGGCTTTCAACGACGGCCAATGGAGAGCTCTCC 340 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 3095 CGGTTGGAATGACGGTAGGCAGGACATGGGCTTTCAACGATGGCCAATGGAGAGCTCTCC 3036 Query 341 AGAAATCTCCCTCTGTTTACGATGAAGAGGTCTTCAAGG 379 ||||||||||||||||||||||||||||||||||||||| Sbjct 3035 AGAAATCTCCCTCTGTTTACGATGAAGAGGTCTTCAAGG 2997 Score = 337 bits (182), Expect = 2e-91 Identities = 192/197 (97%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 377 AGGCCCTCGACTTCGTGGTGAGCGAGGCCAGAAAGTACAAGATCAGGCTTATACTGTCAT 436 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct 2927 AGGCCCTCGACTTCGTGCTGAGCGAGGCCAGAAAGTACAAAATCAGGCTTATACTGTCAT 2868 Query 437 TGGTCAACAACTGGGACGCCTATGGCGGCAAAGCTCAGTACGTTAAATGGGGCAACGCCT 496 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2867 TGGTCAACAACTGGGACGCCTATGGCGGCAAAGCTCAGTACGTTAAATGGGGAAACGCCT 2808 Query 497 CCGGCCTTAATCTCACCTCCGACGACGACTTCTTCACCAACCCCACCCTCAGAAACTTCT 556 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2807 CCGGCCTTAATCTCACTTCCGATGACGACTTCTTCACCAACCCCACCCTCAGAAACTTCT 2748 Query 557 ACCAATCCCATGTCCGG 573 ||||||||||||||||| Sbjct 2747 ACCAATCCCATGTCCGG 2731 Score = 165 bits (89), Expect = 1e-39 Identities = 95/98 (97%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 1 ATGAAGGACCAACTTGGATTCAGAATCGTGCTCTGTTCTGCGATTTTCATAATTCTGACA 60 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct 3452 ATGAAGGACCAACTTGGATTCAGAATTGTGCTCTGTTCTGCGGTTTTCATAATTCTGACT 3393 Query 61 CAAAACAGAGCTCTCGCAGACTTGGACAGCGAGTCCCA 98 |||||||||||||||||||||||||||||||||||||| Sbjct 3392 CAAAACAGAGCTCTCGCAGACTTGGACAGCGAGTCCCA 3355 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66314919945 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5