BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg349470 Length=936 Score E Sequences producing significant alignments: (Bits) Value AT5G01340.1 | Symbols: | Mitochondrial substrate carrier famil... 1471 0.0 > AT5G01340.1 | Symbols: | Mitochondrial substrate carrier family protein | chr5:143055-144720 REVERSE LENGTH=1274 Length=1274 Score = 1471 bits (796), Expect = 0.0 Identities = 886/930 (95%), Gaps = 4/930 (0%) Strand=Plus/Plus Query 9 GGCGGCGAAG-ACTGAATCGAGGAACCAGATTCCGCCGTACATGAAAGCAGTCTCAGGTT 67 |||| || || || ||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct 162 GGCGACG-AGAACGGAATCGAAGAAGCAGATTCCGCCGTACATGAAAGCAGTCTCAGGCT 220 Query 68 CACTAGGCGGAGTCGTCGAGGCTTGTTGTCTCCAACCAATCGACGTAATCAAAACGCGTC 127 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 221 CACTAGGCGGAGTGGTCGAGGCTTGTTGTCTCCAACCAATCGACGTAATCAAAACGCGTC 280 Query 128 TCCAGCTAGATCGCGTCGGAGCGTACAAAGGAATCGCGCACTGTGGTTC-AACGGTGGTT 186 ||||||||||||||||||| || |||||||||||||| ||||||||||| || ||||||| Sbjct 281 TCCAGCTAGATCGCGTCGGCGCTTACAAAGGAATCGCTCACTGTGGTTCGAA-GGTGGTT 339 Query 187 CGCACCGAAGGAGTTCGTGCTCTTTGGAAAGGTTTAACGCCGTTCGCTACTCATCTCACG 246 ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct 340 CGCACCGAAGGAGTTCGTGCTCTCTGGAAAGGCTTAACACCGTTCGCTACTCATCTCACG 399 Query 247 CTTAAGTACACGCTTCGGATGGGATCCAACGCCATGTTTCAAACCGCGTTTAAGGATTCA 306 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 400 CTTAAGTACACGCTTCGGATGGGATCCAACGCCATGTTTCAAACCGCCTTTAAGGATTCC 459 Query 307 GAGACCGGAAAAGTCAGTAATCGGGGCCGTTTGCTTTCCGGATTCGGCGCCGGCGTTCTT 366 ||||||||||| ||||| ||||| |||||||| |||||||||||||| ||||| |||||| Sbjct 460 GAGACCGGAAAGGTCAGCAATCGTGGCCGTTTTCTTTCCGGATTCGGTGCCGGTGTTCTT 519 Query 367 GAAGCTCTCGCCATTGTTACACCCTTTGAGGTGGTGAAAATTAGACTTCAGCAACAGAAA 426 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 520 GAAGCTCTCGCCATTGTTACACCCTTTGAGGTGGTGAAAATTAGACTTCAGCAGCAGAAA 579 Query 427 GGATTAAGTCCTGAGCTTTTCAAGTACAAAGGACCAATACATTGTGCTAGAACCATCGTG 486 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 580 GGATTGAGTCCTGAGCTTTTCAAGTACAAAGGACCAATACATTGTGCTAGAACCATCGTG 639 Query 487 AGAGAAGAAAGCATACTTGGGTTATGGTCAGGTGCAGCACCAACGGTTATGCGAAACGGC 546 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 640 AGAGAAGAAAGCATACTTGGTTTATGGTCAGGTGCAGCACCGACGGTTATGCGAAACGGA 699 Query 547 ACCAACCAAGCTGTAATGTTCACAGCGAAAAACGCATTTGACATACTTTTGTGGAACAAA 606 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 700 ACCAACCAAGCTGTAATGTTCACAGCGAAAAACGCGTTTGACATACTCTTGTGGAACAAA 759 Query 607 CATGAAGGCGATGGTAAAGTCTTGCAGCCATGGCAGTCCATGATCTCAGGGTTTTTAGCT 666 || ||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct 760 CACGAAGGTGACGGTAAAATCTTGCAGCCATGGCAGTCAATGATCTCAGGGTTTTTAGCT 819 Query 667 GGAACCGCAGGTCCGTTCTGCACGGGACCATTTGATGTGGTGAAAACGAGGTTGATGGCT 726 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 820 GGAACCGCAGGTCCGTTCTGCACAGGACCGTTTGATGTGGTGAAAACGAGGTTGATGGCT 879 Query 727 CAGAGCAGAGACAGTGAAGGTGGGATTAGATATAAAGGGATGGTTCATGCCATTAGAACA 786 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 880 CAGAGCAGAGACAGTGAAGGTGGGATTAGATATAAAGGGATGGTTCATGCCATTAGAACG 939 Query 787 ATTTATGCAGAGGAAGGATTAGTGGCTTTATGGAGAGGGTTATTGCCGAGGCTAATGAGG 846 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 940 ATTTATGCAGAGGAAGGATTAGTGGCCTTATGGAGAGGGTTATTGCCGAGGCTAATGAGG 999 Query 847 ATCCCACCAGGACAAGCCATTATGTGGGCTGTTGCTGATCAAGTCACTGGTCTTTATGAA 906 || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1000 ATTCCTCCAGGACAAGCCATTATGTGGGCTGTTGCTGATCAAGTCACTGGTCTTTATGAG 1059 Query 907 ATGAGATATCTTCGGAATGCTACTTTATAG 936 ||||||||||||||||||||| |||||||| Sbjct 1060 ATGAGATATCTTCGGAATGCTCCTTTATAG 1089 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45763307917 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5