BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg351421 Length=1035 Score E Sequences producing significant alignments: (Bits) Value AT3G43580.1 | Symbols: | Beta-galactosidase related protein | ... 134 2e-30 AT3G21960.2 | Symbols: | Receptor-like protein kinase-related ... 67.6 2e-10 > AT3G43580.1 | Symbols: | Beta-galactosidase related protein | chr3:15502143-15503606 FORWARD LENGTH=1464 Length=1464 Score = 134 bits (72), Expect = 2e-30 Identities = 96/108 (89%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 63 TTCGTCCATGGCAAGAGCTCCACCTCCCCATGCGCATCATTTGGATCCTCCATGGCTTAG 122 ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 308 TTCGTGCATGACAAGAGCTCCACCTCCCCATGCGCATCATTTGGATCCCCCATGGCTCAG 367 Query 123 TTCCGAGCTATCGGTTTGCTTCTGGTGGCTGGAGGCCCTTGGACCGTC 170 | || |||||| |||||| |||||||||||||| ||||| |||||| Sbjct 368 TCCCAAGCTATTGGTTTGTTTCTGGTGGCTGGAAATCCTTGAACCGTC 415 > AT3G21960.2 | Symbols: | Receptor-like protein kinase-related family protein | chr3:7737156-7739542 FORWARD LENGTH=1326 Length=1326 Score = 67.6 bits (36), Expect = 2e-10 Identities = 64/77 (83%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 751 TTAATCAACAGTAAGGTTATTATTCATGAAATTGA-AAGCTTGAGGAAGAACGGCATTAT 809 |||| |||| || || ||||||||| |||| | ||| |||||||||||||||||||| Sbjct 824 TTAA-CAACTTTATGGGTATTATTCAAGAAA-CAAGAAGTTTGAGGAAGAACGGCATTAT 881 Query 810 GATCCCGTATCCAAGGA 826 |||||||| ||||||| Sbjct 882 GATCCCGTCCCCAAGGA 898 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50736488470 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5