BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg351608 Length=1245 Score E Sequences producing significant alignments: (Bits) Value AT5G25950.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1770 0.0 AT5G25960.1 | Symbols: | Protein of Unknown Function (DUF239) ... 686 0.0 > AT5G25950.1 | Symbols: | Protein of Unknown Function (DUF239) | chr5:9057793-9059963 REVERSE LENGTH=1538 Length=1538 Score = 1770 bits (958), Expect = 0.0 Identities = 1156/1251 (92%), Gaps = 15/1251 (1%) Strand=Plus/Plus Query 1 ATGAGATTGTTCTTAATAC-TTGTGATTTTGTGTGGATTTTACAATGAAGCCTATGGGAA 59 |||||||| |||||||| | |||||||||||||||| |||||||||||||| |||||||| Sbjct 161 ATGAGATTTTTCTTAAT-CTTTGTGATTTTGTGTGGTTTTTACAATGAAGCATATGGGAA 219 Query 60 AGGTTCTTTAGATATTGATATAAAATTGAAGGCTCTTAATAAGCCAGCGTTGAAGACCAT 119 ||||||||||||||||||| | |||||||||||||||||||| || |||||||||||||| Sbjct 220 AGGTTCTTTAGATATTGATCTGAAATTGAAGGCTCTTAATAAACCTGCGTTGAAGACCAT 279 Query 120 CAAGAG-TACAGATGGAGATATAATAGATTGTATCGATATCTACAAACAACATGCCTTTG 178 |||||| | |||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 280 CAAGAGCGA-AGATGGAGATATAATAGATTGTATAGATATCTATAAACAACATGCCTTTG 338 Query 179 ATCATCCCGCTTTAAGAAACCACAAAATTCAGATGAAACCGAGTGTGGAATTTGGTACAA 238 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 339 ATCATCCCGCTTTAAAAAACCACAAAATTCAGATGAAACCGAGTGTGAAATTTGGTACAA 398 Query 239 AGAAGACTACTACTATACCAAACAACGGTTCTTCTGAACAAATTACGTCTCAGGTTTGGT 298 ||||| |||||||||||||||||||||||||||||||| || | |||||| |||||| Sbjct 399 AGAAG---ACTACTATACCAAACAACGGTTCTTCTGAACACATAAAATCTCAGATTTGGT 455 Query 299 CTAAATCCGGAAACTGTCCAATGGGGACAATACCGGTTCGTAGAGTTAGTAGAGAAGACA 358 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 456 CTAAATCCGGAAAATGTCCAATGGGGACCATACCGGTTCGTAGAGTTAGTAGAGAAGACA 515 Query 359 TAAGCAGAGCCTCTTCACCGTCTGAATTTGGGAGGAAAACTCCTCACAGATACAAG-TTT 417 ||||||||||||||||||||||| | |||||||||||||||||||||| |||| || ||| Sbjct 516 TAAGCAGAGCCTCTTCACCGTCTCATTTTGGGAGGAAAACTCCTCACAAATAC-AGCTTT 574 Query 418 CTCGACAACGCACTTCAACACAAGGGTAATTTCAATATAACAGCAGAAAAAATAAATC-A 476 || ||||||||||||||||| ||||||||||||||||||||| | | ||||||||| | | Sbjct 575 CTAGACAACGCACTTCAACATAAGGGTAATTTCAATATAACACCTGCAAAAATAAA-CGA 633 Query 477 AGCCCAACCAAGGTTACGATCGGAGGCATTTATTGTGGCCCTAGGGTACAATTTTGTCGG 536 |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 634 AGCCCAACCAAGGTTAAGATCGGAGGCATTTATTGTGGCCCTAGGGTTCAATTTTGTCGG 693 Query 537 AGCTCAGTCTGATATAAATATTTGGAACCCTTCGAGGGTTGAGGCTAGCGACTACAGCAC 596 |||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||| || Sbjct 694 AGCTCAATCTGATATAAATATTTGGAACCCTCCGAGGGTTGAAGCTACCGACTACAGTAC 753 Query 597 TGCCCAAATCTGGCTGGTTGGTGGTCTCTCAGATACTTTTGAGAGCCTAGAAGCTGGTTG 656 |||||| |||||||||||||||||||||||||| | |||||||||| | |||| |||||| Sbjct 754 TGCCCAGATCTGGCTGGTTGGTGGTCTCTCAGAGAATTTTGAGAGCGTTGAAGGTGGTTG 813 Query 657 GATGGTGAATCCGGCCGTTTTCGGAGACTCACGTACACGTCTCTTCATCTCATGGACTAG 716 |||||||||||| || |||||||||||||||||||| |||||||||||||| ||||||| Sbjct 814 GATGGTGAATCCAGCTGTTTTCGGAGACTCACGTACCCGTCTCTTCATCTCCTGGACTAC 873 Query 717 AGATGCATACACTAAAACAGGGTGCATTAATCTCTTATGCGCGGGTTTTGTGCAAACAAG 776 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 874 AGATGGATACACTAAAACAGGGTGCATCAATCTCTTATGCGCGGGTTTTGTGCAAACAAG 933 Query 777 TCAAAAATTTGCCCTTGGTGCAACCATTGAACCTGTTTCGAGTGCCTCGAGTACGCAATA 836 | ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct 934 TAAAAAATTTGCCCTTGGTGCAACCGTTGAACCTGTTTCGAGTTCCTCTAGTACGCAATA 993 Query 837 TGACATCACCGTTAGCGTGTTCCTGGATCCAAACAGTGGGAACTGGTGGTTGACTTGCGC 896 | |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| Sbjct 994 TCACATCACCGTTAGCATATTCCTTGATCCAAACAGTGGGAACTGGTGGTTGACTTGCGA 1053 Query 897 AAACAACGTGATGGGTTATTGGCCAGGG-ACACTCTTCAACTACCTTAAACATAGCGCAA 955 |||||||||| ||||||||||||| ||| ||||| ||||||||||| ||||| ||||| | Sbjct 1054 AAACAACGTGTTGGGTTATTGGCC-GGGTACACTATTCAACTACCTAAAACACAGCGCCA 1112 Query 956 CCGCTGTGCAGTGGGGTGGAGAAGTACATAGCCCTAACGTAATACTAAAGAAGCCACACA 1015 | ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| Sbjct 1113 CAGCTGTGCAGTGGGGTGGAGAAGTACATAGCCCTAACGTAGTATTGAAGAAGCCACACA 1172 Query 1016 CGACAACCTCAATGGGGAGTGGACAATGGGCATCTTACATTTGGGCCGAAGCTTGTTACC 1075 |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct 1173 CGACAACCGCAATGGGGAGTGGACAATGGGCATCTTACATCTGGGCCGAAGCTTGTTTCC 1232 Query 1076 ACACTAACATTAGGATCAAGGACTATTCCATGCAGATCAAATACCCCAAGTATCTCTCAG 1135 |||| ||| |||||||||||||||||||||||||| ||||||||||| ||| ||| || | Sbjct 1233 ACACAAACCTTAGGATCAAGGACTATTCCATGCAGCTCAAATACCCCCAGTTTCTATCCG 1292 Query 1136 AGTACGCTGATGAGTATGAA-TGTTATTCTACAAAGCTCCACCGGAAAACATATATGTCA 1194 |||| ||||||||||| || |||||||||||| ||||||||||||||||||||||||| Sbjct 1293 AGTATGCTGATGAGTA-CAACTGTTATTCTACACTGCTCCACCGGAAAACATATATGTCA 1351 Query 1195 GAGCCCCACTTTTACTTCGGAGGACCTGGCCGGAATTCTCGTTGTCCTTAA 1245 ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1352 GAGCCCCACTTTTACTTCGGAGGACCTGGCCGGAACTCTCGTTGTCCTTAA 1402 > AT5G25960.1 | Symbols: | Protein of Unknown Function (DUF239) | chr5:9062917-9065011 REVERSE LENGTH=1059 Length=1059 Score = 686 bits (371), Expect = 0.0 Identities = 624/742 (84%), Gaps = 34/742 (5%) Strand=Plus/Plus Query 512 TGGCCCTAGGGTACAATTTTGTCGGAGCTCAGTCTGATATAAATATTTGGAACCCTTCGA 571 ||||| ||||||| |||||| | |||||||| || ||||||||| | ||||||||| ||| Sbjct 344 TGGCCTTAGGGTATAATTTTATTGGAGCTCAATCCGATATAAATGTATGGAACCCTCCGA 403 Query 572 GGGTTGAGGCTAGCGACTACAGCACTGCCCAAATCTGGCTGGTTGGTGGTCTCTCAGATA 631 ||||| ||||||||||||||||| |||| || || |||||| ||||||| |||||||||| Sbjct 404 GGGTTCAGGCTAGCGACTACAGCTCTGCTCAGATATGGCTGCTTGGTGGCCTCTCAGATA 463 Query 632 CTTTTGAGAGCCTAGAAGCTGGTTGGATGGTGAATCC-GGCCGTTTTCGGAGACTCACGT 690 ||||||| ||| |||||||||||||| ||||||||| | |||||||||||||| || Sbjct 464 CTTTTGAAAGCATAGAAGCTGGTTGGGCGGTGAATCCAAG-TGTTTTCGGAGACTCCCGC 522 Query 691 ACACGTCTCTTCATC-TCA-TGGACTAGAGATGCATACACTAAAACAGGGTGCATTAATC 748 |||||||| |||| | | | ||||||| ||||| |||| ||||||| |||||| | || | Sbjct 523 ACACGTCTTTTCA-CAT-ATTGGACTAAAGATGGATACTCTAAAACGGGGTGCGTCAACC 580 Query 749 TCTTATGCGCGGGTTTTGTGCAAACAAGTCA-AAAATTTGCCCTT-GGTGCAACCATTGA 806 |||||||||| |||||||||||||||| | | || |||| | || |||||| | || || Sbjct 581 TCTTATGCGCAGGTTTTGTGCAAACAACT-ACTAAGTTTG-CATTGGGTGCAGCAATAGA 638 Query 807 ACCTGTTTCGAGTGCCTCGAGTACGCAATATGACATCACCGTTAGCGTGTTCCTGGAT-C 865 ||| ||||||| | | | | ||||| | | | || | || | | || ||| | Sbjct 639 ACCCGTTTCGACT-AC-C---T-CGCAA-A--A-A-CAACATT-TCAT-CACC--GATAC 683 Query 866 CAAACAGTGGGAACTGGTGGTTGACTTGCGCAAACAACGTGATGGGTTATTGGCCAGGGA 925 | ||||| ||||| ||||||||||| || || ||||||||||| ||||||||||| |||| Sbjct 684 C-AACAGCGGGAATTGGTGGTTGACATGTGCTAACAACGTGATAGGTTATTGGCCGGGGA 742 Query 926 CACTCTTCAACTACCTTAAACATAGCGCAACCGCTGTGCAGTGGGGTGGAGAAGTACATA 985 |||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 743 CACTCTTCGCCTACCTCAAACATAGCGCAACCGCTGTGCAGTGTGGTGGAGAAGTACATA 802 Query 986 GCCCTAACGTAATACTAAAGAAGCCACACACGACAACCTCAATGGGGAGTGGACAATGGG 1045 |||| |||| | ||||||||||| || | ||| |||||||||||||| ||||||| Sbjct 803 GCCCAAACG---TGGGGAAGAAGCCACATACAAGAACTTCAATGGGGAGTGGGCAATGGG 859 Query 1046 CATCTTACATTTGGGC-CGAAGCTTGTTACCACA-CTAACATTAGGATCAAGGACTATTC 1103 | |||||| | ||||| | ||||||||||||||| | |||||||| |||||||||||||| Sbjct 860 CCTCTTACCTCTGGGCTC-AAGCTTGTTACCACAGC-AACATTAGAATCAAGGACTATTC 917 Query 1104 CATGCAGATCAAATACCCCAAGTATCTCTCAGAGTACGCTGATGAGTATGAATGTTATTC 1163 | ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 918 CTTGCAGATCAAATACCCCAAATATCTGTCCGAGTACGCTGATGAGTACGAGTGTTATTC 977 Query 1164 TACAAAGCTCCACCGGAAAACATATATGTCAGAGCCCCACTTTTACTTCGGAGGACCTGG 1223 |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| Sbjct 978 TACAAAGCTCCACCGGAAAACATACATGTCAGAGCCCTACTTTTACTTTGGAGGACCTGG 1037 Query 1224 CCGGAATTCTCGTTGTCCTTAA 1245 || ||||||||||||||||||| Sbjct 1038 CCAGAATTCTCGTTGTCCTTAA 1059 Score = 442 bits (239), Expect = 4e-123 Identities = 305/336 (91%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 1 ATGAGATTGTTCTTAATACTTGTGATTTTGTGTGGATTTTACAATGAAGCCTATGGGAAA 60 |||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||| Sbjct 1 ATGAGATTGTTCTTAATATTTGCGATTCTGTGTGGTTTTTACAATGAAGCCTATGGGAAA 60 Query 61 GGTTCTTTAGATATTGATATAAAATTGAAGGCTCTTAATAAGCCAGCGTTGAAGACCATC 120 |||||||||||||| ||||| ||| ||||| ||||||||||||| | |||||||||||| Sbjct 61 GGTTCTTTAGATATCGATATGAAACTGAAGTCTCTTAATAAGCCTTCCTTGAAGACCATC 120 Query 121 AAGAG-TACAGATGGAGATATAATAGATTGTATCGATATCTACAAACAACATGCCTTTGA 179 ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 121 AAGAGCGA-AGATGGAGATATAATAGATTGTATAGATATCTACAAACAACATGCCTTTGA 179 Query 180 TCATCCCGCTTTAAGAAACCACAAAATTCAGATGAAACCGAGTGTGGAATTTGGTACAAA 239 ||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct 180 TCATCCCGCTTTAAGGAACCACAAGATTCAGATGAAACCGAGCGTGGACTTTGGTACAAA 239 Query 240 GAAGACTACTACTATACCAAACAACGGTTCTTCTGAACAAATTACGTCTCAGGTTTGGTC 299 ||| ||||||| | | ||||||||||||||||| |||||||| |||||||| ||||||| Sbjct 240 GAAAACTACTA-T-T-CCAAACAACGGTTCTTCGGAACAAATAACGTCTCAAATTTGGTC 296 Query 300 TAAATCCGGAAACTGTCC-AATGGGGACAATACCGG 334 |||||||||||| ||||| || ||| |||||||||| Sbjct 297 TAAATCCGGAAATTGTCCCAAAGGG-ACAATACCGG 331 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61194464355 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5