BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg353533 Length=504 Score E Sequences producing significant alignments: (Bits) Value AT4G32930.2 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 701 0.0 > AT4G32930.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF866, eukaryotic (InterPro:IPR008584). | chr4:15898835-15900289 FORWARD LENGTH=675 Length=675 Score = 701 bits (379), Expect = 0.0 Identities = 482/527 (91%), Gaps = 26/527 (5%) Strand=Plus/Plus Query 1 ATGGTGAACTATGTGCTCAAAATCACCGCTGATCTCGAGAATCTGACTAATCTCCAGCCT 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 44 ATGGTGAACTATGTGCTCAAAATCACCGCTGATCTCGAGAATCTCACTAATCTCCAGCCT 103 Query 61 TCCGGTGGCTGCGACGATTCAAACTTCCCTTACCTCTTCAAGTTGAAATGTGAAAGATGC 120 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 104 TCCGGTGGCTGCGACGATTCCAACTTCCCTTACCTCTTCAAGTTGAAATGTGAAAGATGT 163 Query 121 GGAGAGGTGACTCCGAAAGAAACATGTGTTACTTTGAATGAGACTTTTACTCCTCCGGGA 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 164 GGAGAGGTGACTCCGAAAGAAACATGTGTGACTTTGAATGAGACTTTTACTCCTCCGGGA 223 Query 181 GGTA-GGG-----GT-A-CTTG-T----------C--ATCTT-G-TACAGA--AGTGTAA 215 |||| ||| || | |||| | | || || | | | || |||||| Sbjct 224 GGTAGGGGTACTTGTCATCTTGTTCAGAAGAAAGCAAATATTGGCT-CTGATTTGTGTAA 282 Query 216 GTTCTGTGGAAGGGAAGGGAATGTGACTATGATTCCGGGCAAAGGTCGACCTTTAACTCT 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 GTTCTGTGGAAGGGAAGGGAATGTGACTATGATTCCGGGCAAAGGTCGACCTTTAACTCT 342 Query 276 GGAAGATTCTGAGGCTGGAGAACATGCTCCTCTTATGGTGTTCGACTGTCGGGGATATGA 335 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||| Sbjct 343 GGAAGATTCTGAGGCTGGAGAACATGCCCCTCTTATGGTGTTTGACTGTCGTGGCTATGA 402 Query 336 ACCCATAGATTTCGGCTTTGGTGGATATTGGAAAGCTGAATCTGAATCTGGAACCAAATT 395 |||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||| Sbjct 403 ACCCATTGATTTCGGATTTGGTGGATATTGGAAAGCTCAAGCTGAATCTGGAACCAAATT 462 Query 396 TGATGACATTGATTTGTCAAGCGGGGAGGAATTCACAGAGTATGATGAGAAGGGAGAATG 455 |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 463 TGATGAGATTGATTTGTCGAGCGGGGAGGAATTCACAGAGTACGATGAGAAGGGAGAATG 522 Query 456 CCCAGTAATGATATCGAACTTCCGTGCAAGCTTCAGCGTCACCAAGT 502 |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 523 CCCAGTAATGATATCGAATTTCCGTGCAAGCTTCAGCGTCACCAAGT 569 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24062156413 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5