BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg353559 Length=912 Score E Sequences producing significant alignments: (Bits) Value AT4G32680.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 977 0.0 > AT4G32680.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:15763237-15765114 REVERSE LENGTH=1149 Length=1149 Score = 977 bits (529), Expect = 0.0 Identities = 605/641 (94%), Gaps = 7/641 (1%) Strand=Plus/Plus Query 277 GCTTTCACAAGTCACCAGGAAAACATCTCTGATGCTG-AGATGCTTGATAATGTGGATCA 335 |||||||||||||||||||| |||||||||||||||| | |||||||| ||||||||||| Sbjct 286 GCTTTCACAAGTCACCAGGACAACATCTCTGATGCTGCA-ATGCTTGAGAATGTGGATCA 344 Query 336 TATAATCCATCAAAGCAGGGCAGAATCGCTTCAGCCTCAGAGGCATGCTGAAACATTGGC 395 ||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||| Sbjct 345 TATCATCCATCAAAGCAGGGAAGAACCTCTTCAGCCTCAGAGGCATGCTGAAACATTGGC 404 Query 396 AGAAGCCTCTGGTGCAGATCCTAGAG--AC-GCAACAATACAACCGTCTCCTACAACATC 452 ||||||||||| | |||||||||||| || |||||||||||||| ||||||||||||| Sbjct 405 AGAAGCCTCTGCTTCAGATCCTAGAGACACAACAACAATACAACCGCCTCCTACAACATC 464 Query 453 AAGTGTTCAAAACCCATCAGTGGTAAATTTAGGTGCTTCTCAAGCATTTATTCCTGTGGT 512 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 465 AAGTGTTCAAAACCCATCAGTGGTAGATTTAGGTGCTTCTCAAGCATTTATTCCTGTGGT 524 Query 513 TAGTTTTGTGAACGCCATCACGCCAAAACACATTGGAGCGGCCATTGATGCTTCAGAATA 572 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| Sbjct 525 TAGTTTTGTGAACGCCATCACACCAAAGCACATTGGAGCGGCCATTGATGCTTCGGAATA 584 Query 573 CGCACGGATGTTCACAGCTCTTGCGATTGCACTTGTTGTCATACTATCTCATCTCGGTTT 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 585 CGCACGGATGTTCACAGCTCTTGCGATTGCACTTGTTGTCATACTATCTCATCTCGGTTT 644 Query 633 CTCTTCCCTAGGCAACATAGTAAGCTTCAGGCCAGTTTTCTTGCTTCTGTTGACCGATGC 692 |||||||||||||||||| ||||||||||||||||||||||||||| | ||||| ||||| Sbjct 645 CTCTTCCCTAGGCAACATTGTAAGCTTCAGGCCAGTTTTCTTGCTTGTCTTGACTGATGC 704 Query 693 CACAATTGTGCTTGGACGTGTTCTGCTGAGTCATCATGGAGATTCTTCCTCAGCTTCAGG 752 ||||||||||||||||||||||||||||||||||| |||||| |||||||| || ||||| Sbjct 705 CACAATTGTGCTTGGACGTGTTCTGCTGAGTCATCGTGGAGACTCTTCCTCGGCCTCAGG 764 Query 753 GACAGTAATGAGCGGGCAAGGTAT-GATGGACCAAGTAGGCAACGCTTTGGAGATGGTGA 811 ||| || ||||||||||| ||||| | ||||||||||||||||||||||||||| ||||| Sbjct 765 GACGGTGATGAGCGGGCAGGGTATTG-TGGACCAAGTAGGCAACGCTTTGGAGACGGTGA 823 Query 812 TGATGATGAAGAAGATAATGGATGCACTTCTTATGGATTTTAGCTTATACGCTGTGATTC 871 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 824 TGATGGTGAAGAAGATAATGGATGCACTTCTTATGGATTTTAGCTTATACGCTGTGATTC 883 Query 872 TCATATGTGGCCTATTGGTCACCCAAAACATCTTTCCTTAG 912 ||||||||||||| ||||||||||||| ||||||||||||| Sbjct 884 TCATATGTGGCCTCTTGGTCACCCAAAGCATCTTTCCTTAG 924 Score = 244 bits (132), Expect = 9e-64 Identities = 185/209 (89%), Gaps = 9/209 (4%) Strand=Plus/Plus Query 1 ATGTCGTCGAACAGCAGAGAAGCCAGGAGGCGGAAGATTCTAGAAAGAGGATCTGATCGT 60 ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 76 ATGGCGTCGAACAGCAGAGAAGCCAGGAGGCGGAAGATCCTAGATAGAGGATCTGATCGT 135 Query 61 TTAGCCTTTATCACTGGTCAGATCAACGGCGCTCATCCTCCTCCTCCTTCCGATTCTCCT 120 ||||||||||||||||||||||||||||||| || | |||| ||||||||||||||| || Sbjct 136 TTAGCCTTTATCACTGGTCAGATCAACGGCGTTCCTTCTCCACCTCCTTCCGATTCTACT 195 Query 121 TCTTCCCTTTCCCCGTCTCATCTCCAA--T--C-A-TC---ACCGGACACGATTCCCCCT 171 ||||||||||||| |||| | || ||| | | | || |||||| |||||||||||| Sbjct 196 TCTTCCCTTTCCCAGTCTGACCTTCAAACTGACCAATCCTTACCGGATACGATTCCCCCT 255 Query 172 CGTGAACAGATTCTTAAAGCTCAAGAAAT 200 || || ||||||||||||||||||||||| Sbjct 256 CGCGATCAGATTCTTAAAGCTCAAGAAAT 284 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44557688389 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5