BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg353574 Length=2307 Score E Sequences producing significant alignments: (Bits) Value AT3G26480.1 | Symbols: | Transducin family protein / WD-40 rep... 3518 0.0 AT3G26470.1 | Symbols: | Powdery mildew resistance protein, R... 536 3e-151 > AT3G26480.1 | Symbols: | Transducin family protein / WD-40 repeat family protein | chr3:9687273-9690827 REVERSE LENGTH=2295 Length=2295 Score = 3518 bits (1905), Expect = 0.0 Identities = 2181/2313 (94%), Gaps = 24/2313 (1%) Strand=Plus/Plus Query 1 ATGATTCGCGGCGGAAGAAACAACATTACTTCCGCTCCGGCGTTTTCGAAAGACGCAAAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGATTCGCGGCGGAAGAAACAACATTACTTCCGCTCCGGCGTTTTCGAAAGACGCAAAG 60 Query 61 AAGCTTCTTCTATGCACAGCCAACACCGTCTCTGTTTACCGCGTCGCCACTGGCTTAAAG 120 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 61 AAGCTTCTTTTATGCACAGCCAACACCGTCTCTGTTTACAGCGTCGCCACTGGCTTAAAG 120 Query 121 ATTACTTCACTCGAGGATCATACAGCACCTGTGACGACTGTGATTGTTGATATGGCGTCC 180 |||||||||||||||||||||||||| ||||||||| |||||||||||||| | | ||| Sbjct 121 ATTACTTCACTCGAGGATCATACAGCGCCTGTGACGTCTGTGATTGTTGATCCGTCTTCC 180 Query 181 AACGAGACCCACAGTTACTGTTGGACTTCGTCGCTCGATGGGAAAATTCGGATTTGGGAG 240 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GACGAAACCGTCAGTTACTGTTGGACTTCGTCGCTCGATGGGAAAATTCGGATTTGGGAG 240 Query 241 TTCTCTGCGCCGAAGCTTTTGAAGACATTTGATACCCACCTTCCAATTCACTCTCTGGTG 300 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 241 TTCTCTGCGCCGAAGCTTTTGAAGATATTTGATACCCACCTTCCAATTCACTCTCTGGTG 300 Query 301 ATGATTCCATCTCACGTGTCACACTCCGTGATTGCTTATGTTTCGGTTGAGGACTATTCA 360 ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 301 ATGATTCCAGCTCAAGTGTCACATTCCGTGATTGCTTATGTTTCGGTTGAGGACTATTCA 360 Query 361 AGTGTGTCCAGTGATTTGTTTGGACAAATCCGGAGATATGATCTCACTGAAGAGCCTCTT 420 |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 361 AGTGTGTCCAAAGATTTGTTTGGACAAATCCGGAGATATGATCTCACTCAAGACCCTCTT 420 Query 421 CCTAGTGGAGACATTTTGAAAGAGATGGAAGAACCAAAACCTATTGTTCTAAGTCCCT-T 479 | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 421 CATAGTGGAGACACTTTGAAAGAGATGGAAGAACCAAAACCTATTGTTTTAAGTCCCTCT 480 Query 480 AGGAGATTTTTTCGGCGTCAGTCGTAGTTGCAATATACATATATGGAATGCCTCTCTTGG 539 ||||| |||||||||||| ||| || |||| ||||||||||||||||| | Sbjct 481 -GGAGAGTTTTTCGGCGTCTGTCATAACTGCAGTATACATATATGGAATG-------T-- 530 Query 540 GGCATCAGAGCATCTCAAGCCAAAGGAGACGACATTACATCACACAGAGTTGATTACTGT 599 |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 531 GGCATCAGAGCACCTCATGCCAAAGGAGACGACATTACATCATACAGAGTTGATTACTGT 590 Query 600 TTTTGCTTTCCATCCCAATCAGAGAATATTAGCAGCCGGTGATGTAAAAGGAAGAGTGTT 659 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 591 TTTTGCTTTCCATCCCAATCAGAGAATATTAGCAGCCGGTGATGTAACAGGAAGAGTGTT 650 Query 660 AATTTGGAAGGATATTGGTAATGGAGAACTTACTTCAGTGAAAAGTGAAGGTGATCCTGA 719 |||||||||||||| ||||| ||||||| ||||||||||||||| ||||| |||| |||| Sbjct 651 AATTTGGAAGGATAATGGTATTGGAGAATTTACTTCAGTGAAAACTGAAGATGATACTGA 710 Query 720 ATCTTGCACTGCATTCAACTGGCACTCCGCTGAAGTAACCGTCCTTAATTTCTCTTCAGA 779 |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 711 ATCTTGCACTACTTTCAACTGGCACAGCGCTGAAGTAACCGTCCTTAATTTCTCTTCAGA 770 Query 780 TGGAGCACTGTTGTATTCTGGGGTAAAGGAAGGTGTTTTTGTTGTTTGGGAGCTAGATAC 839 ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct 771 TGGAGCACTTTTGTATTCTGGGGTAAAGGCAGGTGATTTTGTTGTTTGGGAGCTAGGTAC 830 Query 840 AAGGAAAAAGCAACTTTTGCCAAAGATTGGATC-CCCGTTGTTGTATTTCATCTCCTCTT 898 | |||| |||||||||||||||||||||||||| ||| |||||||||||||||| ||||| Sbjct 831 AGGGAAGAAGCAACTTTTGCCAAAGATTGGATCTCCC-TTGTTGTATTTCATCTTCTCTT 889 Query 899 CAGATCCAACTCTTTCTTCTGTGATTTGTGCAGATAATCAGATTCATCTT-TTAAAAATG 957 ||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||| Sbjct 890 CAGATTCAACTCTTTCTTCTGTGATTTGTGCAGATAATCAAATTCATCTTCTT-AAAATG 948 Query 958 CCTTCCATGGAGATACTGAGAACGATATCTGGAATCAAGCCTCGGAGATCAGAGCGTCAC 1017 ||||||||||||||| ||||||||||||||||||||||||||| || | ||||||||||| Sbjct 949 CCTTCCATGGAGATATTGAGAACGATATCTGGAATCAAGCCTCCGACACCAGAGCGTCAC 1008 Query 1018 GGGTTTATATGCTACGTTAAAACGAGGGATATATGCCTCACCAGAACTGTGTCCATTGAT 1077 ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| Sbjct 1009 GGGTTTATATGCTACGTCAAAACGCGGGATATATGCCTCACCAGAACTGTATCCATTGAT 1068 Query 1078 CGTTCTTCCGGTATAGCTGCTTTCTGTGCAGAGAATCATCGTGTTCAACTCTACAACCTT 1137 |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 1069 CGTTCTTCCGGTATAGCTGCTTTCTGCACAGCGAATCATCGTGTTCAACTCTACAACCTT 1128 Query 1138 TTAAGTGACCATGAAATTTCAGAGGTTCAAATTTGCGAGAGAAATCATCATCCAGACG-- 1195 |||||||||||||| ||||||||||||||||||||| | ||||||||||||||| Sbjct 1129 TTAAGTGACCATGACATTTCAGAGGTTCAAATTTGC----G--ATCATCATCCAGACGAT 1182 Query 1196 G-TGATGAAGTCCGGGTTCTCGTGACTGCGGTTGCTCTCTCTCGGAATGGCTCAGTGATG 1254 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1183 GATGATCAAGTCCGGGTTCTCGTGACTGCGGTTGCTCTCTCTCGGAATGGCTCAGTAATG 1242 Query 1255 ACTACAGCTGATGCCAGATTTGCTGCAAGCAATTTCAGTGAAGGCTTAGTTTCTCTCAAG 1314 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1243 ACTACAGCTGAGGCCAGATTTGCTGCAAGCAATTTCAGTGAAGGCATAGTTTCTCTCAAG 1302 Query 1315 TTTTGGGTGTTTGTACCGGACAGCAAAACTTTCAGCTTATCGACAGTCATAAATCAACCT 1374 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1303 TTTTGGGTATTTGTACCGGACAGCAAAACTTTCAGCTTATCGACAGTCATAAATCAACCT 1362 Query 1375 CACAGGGAAGCTGCTATCACAGCCATTGCCCTTAACCCCGCCCGTTCCATGGCTGTTAGT 1434 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1363 CACAGGGAAGCTGCAATTACAGCCATTGCCCTTAACCCCGCCCGTTCCATGGCTGTTAGT 1422 Query 1435 ATATCTTCTGCTGGGGACTTCAAGATTTGGGTTTGCAATAGCGACAAGAATCTGACACCT 1494 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1423 ATATCTTCTGCTGGGGACTTCAAGATTTGGGTTTGCAGTAGCGACAAGAATCTGACACCT 1482 Query 1495 GAGGATTCAAACTGGATATGTCATGGAGATGGCTCTTACAAGAGAACGCCAATAACAGCT 1554 ||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||| Sbjct 1483 GAGGACTCAAACTGGATTTGTCATGGAGTTGGCTCTTATAAGAGAACGCCAATAACAGCT 1542 Query 1555 GCTGTTTTTTCCGGGGATGGTTCTTGTCTGGCTATTGCGGCTAAAACAGTTATTACGATC 1614 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1543 GCTGTTTTTTCCGGGGATGGTTCTTGTCTGGCTCTTGCGGCTAAAACAGTTATTACGATC 1602 Query 1615 TGGCACCCGTTAAAGAACGAACTCTTGTATGTAGTTGGAAAGGCAAATGCGACAATTATG 1674 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 1603 TGGCACCCGTTAAAGAACGAACTCCTGTATGTAGTTGGAAAGGCAAATGCGCCAATTATG 1662 Query 1675 GAACTCTCATTCACTGGAGGAGGCTTCCTTATTGCTGCATCCCATGGTTCCACACCGCAC 1734 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1663 GAACTCTCATTCACTGGAGGAGGCTTCCTTATTGCTGCATCCCATGGTTCCACACCGCAC 1722 Query 1735 TTATCTGTCTGGGATTTGATGACGTTCTGCTTATCATGGTCTTATAGATTATACATAGAA 1794 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1723 TTATCTGTCTGGGATCTGATGACGTTCTGCTTATCATGGTCATATAGATTATACATAGAA 1782 Query 1795 GCCATTGCCACTGAAGTGGGCTCGCCATACTTTGCAGTATTAACATGGCTTCCAGAATCT 1854 |||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct 1783 GCCATTGCTACTGAAGTGGACTCACCATACTTTGCAGTTTTAACATGGCTTCCAGAATCT 1842 Query 1855 GATAGGTTGGTAAAATCTAACGGACAAATGTTCTGCGGGAAAGATGGTGCTATTCTCTTG 1914 |||||||||||||||||||||| ||| || ||| ||||||||||||||||||| |||||| Sbjct 1843 GATAGGTTGGTAAAATCTAACGAACAGATATTCCGCGGGAAAGATGGTGCTATCCTCTTG 1902 Query 1915 TTTGATGGGTCAGGCCCTAAACCAGTAGCTATTTGGACTGTAATGAAGGCCAGGGGAGGA 1974 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1903 TTTGATGGGTCAGGCCCTAAACCAGTAGCTATTTGGACTGTAATGAAGGCCAGAGGAGGA 1962 Query 1975 ACGCTTTCATTTGTGGAAGATGGTAAAAAGTCTCAGCCACTTCTCGCATATGTAAACAGG 2034 || ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1963 ACACTTTCATTTGTGGAAGATGGTAAAAAGTCTCAGCCGCTTCTCGCGTATGTAAACAGG 2022 Query 2035 AGCCATGAATATGTTCTTTTTGATCCTTATGGCGATGAAAAACTCGAGACTAGCGCCATA 2094 ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 2023 AGCCATGAATATGTTCTATTTGATCCTTATAGCGATGAAAAACTCGAGACTAGCGCCATA 2082 Query 2095 GATTATGAAGTTTTTCTTGCAGCAATAAGCAAGAAGACGAAGAGATCTAGGAAGAAAGCA 2154 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 2083 GATTATGAAGTTTTTCTTGCAGCAATAAGCAAAAAGAAGAAGAGATCTAGGAAGAAAGCA 2142 Query 2155 TTGATGTCAGAGAAACCTTGGGAAACAAACTTTTGTGGATCAACGCTCAATTTCCCGCCT 2214 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 2143 TTGATGTCAGAGAAACCTTGGGAAACAATGTTTTGTGGATCAACACTCAATTTCCCGCCT 2202 Query 2215 TTCCCCGACGTGTGCTCTGCTTTCTTCAGTTCCCGGATGCAGAAAAAGGTGTGTgagaga 2274 ||||||||| ||||| || | |||||||||||||||||||||||| |||||||||||||| Sbjct 2203 TTCCCCGACTTGTGCGCTTCGTTCTTCAGTTCCCGGATGCAGAAAGAGGTGTGTGAGAGA 2262 Query 2275 gcagagagagaACCTGAAAGTCATAGCTCTTGA 2307 ||||| ||| |||||||||| |||||||||||| Sbjct 2263 GCAGATAGACAACCTGAAAGACATAGCTCTTGA 2295 > AT3G26470.1 | Symbols: | Powdery mildew resistance protein, RPW8 domain | chr3:9686098-9687642 FORWARD LENGTH=1454 Length=1454 Score = 536 bits (290), Expect = 3e-151 Identities = 328/347 (95%), Gaps = 0/347 (0%) Strand=Plus/Minus Query 1961 AGGCCAGGGGAGGAACGCTTTCATTTGTGGAAGATGGTAAAAAGTCTCAGCCACTTCTCG 2020 ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1431 AGGCCAGAGGAGGAACACTTTCATTTGTGGAAGATGGTAAAAAGTCTCAGCCGCTTCTCG 1372 Query 2021 CATATGTAAACAGGAGCCATGAATATGTTCTTTTTGATCCTTATGGCGATGAAAAACTCG 2080 | ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct 1371 CGTATGTAAACAGGAGCCATGAATATGTTCTATTTGATCCTTATAGCGATGAAAAACTCG 1312 Query 2081 AGACTAGCGCCATAGATTATGAAGTTTTTCTTGCAGCAATAAGCAAGAAGACGAAGAGAT 2140 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 1311 AGACTAGCGCCATAGATTATGAAGTTTTTCTTGCAGCAATAAGCAAAAAGAAGAAGAGAT 1252 Query 2141 CTAGGAAGAAAGCATTGATGTCAGAGAAACCTTGGGAAACAAACTTTTGTGGATCAACGC 2200 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 1251 CTAGGAAGAAAGCATTGATGTCAGAGAAACCTTGGGAAACAATGTTTTGTGGATCAACAC 1192 Query 2201 TCAATTTCCCGCCTTTCCCCGACGTGTGCTCTGCTTTCTTCAGTTCCCGGATGCAGAAAA 2260 ||||||||||||||||||||||| ||||| || | |||||||||||||||||||||||| Sbjct 1191 TCAATTTCCCGCCTTTCCCCGACTTGTGCGCTTCGTTCTTCAGTTCCCGGATGCAGAAAG 1132 Query 2261 AGGTGTGTgagagagcagagagagaACCTGAAAGTCATAGCTCTTGA 2307 ||||||||||||||||||| ||| |||||||||| |||||||||||| Sbjct 1131 AGGTGTGTGAGAGAGCAGATAGACAACCTGAAAGACATAGCTCTTGA 1085 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 114507443145 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5