BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg355235 Length=1464 Score E Sequences producing significant alignments: (Bits) Value AT4G15440.1 | Symbols: HPL1, CYP74B2 | hydroperoxide lyase 1 | ... 2111 0.0 > AT4G15440.1 | Symbols: HPL1, CYP74B2 | hydroperoxide lyase 1 | chr4:8835495-8838676 FORWARD LENGTH=1743 Length=1743 Score = 2111 bits (1143), Expect = 0.0 Identities = 1362/1467 (93%), Gaps = 18/1467 (1%) Strand=Plus/Plus Query 1 ATGGCGGCTG-CTTCCCCGCGGTCACCACCGTCAACACCCCTATCATCGCAGCAGCCTCC 59 |||||||| | ||||||||||| |||||||||||||| ||||| |||| |||||||| || Sbjct 76 ATGGCGGC-GACTTCCCCGCGGCCACCACCGTCAACATCCCTAACATCTCAGCAGCCACC 134 Query 60 GTCATCCCCGTCGCAGCTTCCCCTCCGTACAATGCCGGGATCGTACGGTTGGCCGGTT-G 118 ||| |||| || ||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct 135 ATCACCCCCCTCACAGCTTCCCCTCCGTACAATGCCGGGATCGTACGGCTGGCC-GTTGG 193 Query 119 TTGGACCTTTGTCGGACCGTTTAGATTACTTCTGGTTCCAAGGACCCGATAAGTTTTTCC 178 ||||||| || ||||||||||||| | ||||||||||||||||||||||||| Sbjct 194 TTGGACCATTATCGGACCGTTTAG---A-------TTCCAAGGACCCGATAAGTTTTTCC 243 Query 179 GGACAAGGGCTGAAAAGTACAAGAGCACTGTGTTCCGTACAAACATTCCTCCGACGTTTC 238 ||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 244 GGACAAGAGCTGAGAAGTATAAGAGCACTGTGTTCCGTACAAATATTCCTCCGACGTTTC 303 Query 239 CTTTCTTTGGCGACGTTAACCCTAACATTGTCGCCGTTCTCGACGTCAAGTCTTTTAGCC 298 ||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 304 CTTTCTTCGGCAACGTTAACCCTAACATCGTCGCCGTTCTTGACGTCAAGTCTTTTAGCC 363 Query 299 ATCTCTTTGACATGGATCTGGTTGATAAAAGAGATGTTCTCATTGGAGACTTCCGGCCTA 358 |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 364 ATCTTTTTGACATGGATCTAGTTGATAAAAGAGATGTTCTCATCGGAGACTTCCGGCCTA 423 Query 359 GCCTTGAGTTCTACGGCGGCGTTCGTGTTGGAGTTTATCTTGACACTACCGAGCCAAAGC 418 |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 424 GCCTTGGGTTCTACGGCGGCGTTCGTGTTGGAGTTTATCTCGACACTACTGAGCCAAAGC 483 Query 419 ACGCCAAGATAAAAAGTTTCACTATGGAAATACTAAAACGAAGCTCAAAAGTATGGCTAC 478 |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 484 ACGCCAAGATAAAAGGTTTCGCTATGGAAACACTAAAACGAAGCTCAAAAGTATGGCTAC 543 Query 479 AAGAGCTTCGTTCAAACCTAAACACTTTCTGGGGAACAATCGAATCCGAAGT-TACCAAA 537 |||||||||||||||||||||||| ||||||||||||||||||||||||| | | ||||| Sbjct 544 AAGAGCTTCGTTCAAACCTAAACATTTTCTGGGGAACAATCGAATCCGAAATCT-CCAAA 602 Query 538 AACGGCGCCGCTTCATATATCTTCCCTCTCCAACGTTGCATCTTCAGTTTCCTCTGTGCC 597 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 603 AACGGTGCCGCTTCATATATCTTCCCTCTCCAACGTTGCATCTTCAGTTTCCTCTGCGCC 662 Query 598 TCTCTCGCCGGCGTTGACGTTTCCGTATCGCCGGACATCGCTGAGAACGGTTGGAAAACA 657 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 663 TCTCTCGCCGGCGTTGACGCTTCCGTATCGCCGGACATCGCTGAGAACGGTTGGAAAACA 722 Query 658 CTCAATACTTGGCTTGCATTGCAAGTTATCCCCACCACTAAACTCGGCATTGTTCCTCAG 717 |||||||||||||||| ||||||||||| ||||| ||||||| ||| | ||||||||| Sbjct 723 ATCAATACTTGGCTTGCGTTGCAAGTTATTCCCACTGCTAAACTTGGCGTAGTTCCTCAG 782 Query 718 CCGCTTGAAGAGATTTTTCTCCATACTTGGCCTTACCCTTCTCTCTTAGTCGCCGGAAAT 777 || |||||||||||||| || |||||||||||||| |||||||||||| ||||||||||| Sbjct 783 CCTCTTGAAGAGATTTTACTTCATACTTGGCCTTATCCTTCTCTCTTAATCGCCGGAAAT 842 Query 778 TACAAAAAGCTTTGCAATTTCATCGACGAGAACGCCGGAGATTGTCTCCGGTTAGGTCAA 837 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 843 TACAAAAAGCTTTACAATTTCATCGACGAGAACGCCGGAGATTGTCTCCGGTTAGGTCAA 902 Query 838 GAAGAATTCGGGTTGACCCGAGATGAGACGATTCAGAATCTTTTATTCGTGTTGGGTTTT 897 ||||||||||||||||||||||||||| | ||||| |||||| | || || || |||||| Sbjct 903 GAAGAATTCGGGTTGACCCGAGATGAGGCTATTCAAAATCTTCTCTTTGTTTTAGGTTTT 962 Query 898 AACGCTTACGGGGGCTTTTCCGTCTTTTTACCTTTTTTGATCGGAAAAATCACCGGCGAT 957 || || |||||||||||||||||||| ||||||| ||||||||| | ||| |||||||| Sbjct 963 AATGCCTACGGGGGCTTTTCCGTCTTCTTACCTTCTTTGATCGGGAGAATAACCGGCGAC 1022 Query 958 AATTCCGGTCTCCAGGAGAGGATTA-AATCCGAAGTCAGGAGAGTTTGCGGATCCGAGTC 1016 ||||||||| | ||||||||||||| || ||||||||||||||||||||||||||| ||| Sbjct 1023 AATTCCGGTTTACAGGAGAGGATTAGAA-CCGAAGTCAGGAGAGTTTGCGGATCCGGGTC 1081 Query 1017 GGATCTTAATTTCAAGACGGTCAACGAAATGGAGCTGGTTAAATCGGTGGTTTACGAAAC 1076 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 1082 GGATCTTAATTTCAAGACGGTTAACGAAATGGAGCTGGTTAAATCCGTGGTTTACGAAAC 1141 Query 1077 GCTGCGTTTTAATCCTCCGGTTCCTTTGCAATTCGCACGTGCGAGGGAAGATTTTCAGAT 1136 ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 1142 GCTGCGTTTTAGTCCTCCGGTTCCGCTGCAATTCGCACGTGCGAGGAAAGATTTTCAGAT 1201 Query 1137 AAGTTCACACGATGCTGTTTTTGAGGTTAAGAAAGGTGAGCTTCTTTGTGGTTACCAGCC 1196 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1202 AAGTTCACACGATGCTGTTTTTGAGGTCAAGAAAGGTGAGCTTCTTTGTGGTTATCAGCC 1261 Query 1197 GCTTGTGATGAGAGACGCTAATGTTTTTGACGAACCGGAGGAATTTAAACCGGACCGGTT 1256 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1262 GCTTGTGATGAGAGACGCTAATGTTTTTGACGAACCGGAGGAATTTAAACCGGACCGGTA 1321 Query 1257 TGTAGGTGAGACCGGGTCTGAATTGCTGAATTATCTCTACTGGTCTAACGGTCCACAAAC 1316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1322 TGTAGGTGAGACCGGGTCTGAATTGCTGAATTATCTCTACTGGTCTAACGGTCCACAAAC 1381 Query 1317 AGGTACACCGAGCGCTTCGAACAAACAGTGTGCAGCTAAGGACATGGTCACTCTCACGGC 1376 ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1382 CGGTACCCCGAGCGCGTCGAACAAACAGTGTGCAGCTAAGGACATTGTCACTCTCACGGC 1441 Query 1377 TAGCTTGGTCATTGCCGATTTATTTCTCCGGTATGATTCGGTTACTGGCGACTCCGGTTC 1436 | |||| || |||||||||||||||||||||||||| || ||||||| ||||||||||| Sbjct 1442 TTCCTTGCTCGTTGCCGATTTATTTCTCCGGTATGATACGATTACTGGTGACTCCGGTTC 1501 Query 1437 AATTAAAGCTGTTGTTAAAGCTAAATA 1463 ||||||||||||||||||||||||||| Sbjct 1502 AATTAAAGCTGTTGTTAAAGCTAAATA 1528 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72188383710 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5