BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg357601 Length=405 Score E Sequences producing significant alignments: (Bits) Value AT5G53560.1 | Symbols: ATB5-A, B5 #2, ATCB5-E, CB5-E | cytochro... 654 0.0 > AT5G53560.1 | Symbols: ATB5-A, B5 #2, ATCB5-E, CB5-E | cytochrome B5 isoform E | chr5:21759367-21760578 FORWARD LENGTH=739 Length=739 Score = 654 bits (354), Expect = 0.0 Identities = 388/405 (96%), Gaps = 0/405 (0%) Strand=Plus/Plus Query 1 ATGGCTTCAGATCGAAAAGTTTTAACTTTCGAAGAAGTTTCACAGCACAACAAAACTAAG 60 ||| |||||||||| || ||| ||| ||| |||||||||||| ||||||||||||||||| Sbjct 110 ATGTCTTCAGATCGGAAGGTTCTAAGTTTTGAAGAAGTTTCAAAGCACAACAAAACTAAG 169 Query 61 GATTGTTGGCTTATTATTTCCGGCAAGGTGTATGATGTGACTCCATTCATGGATGATCAC 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 170 GATTGTTGGCTTATTATTTCCGGCAAGGTGTATGATGTGACTCCATTCATGGATGATCAT 229 Query 121 CCTGGAGGCGATGAAGTCTTGTTGTCCTCAACAGGGAAAGATGCTACAAATGATTTTGAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 230 CCTGGAGGCGATGAAGTCTTGTTGTCCTCAACAGGGAAAGATGCTACAAATGATTTTGAA 289 Query 181 GACGTTGGTCACAGCGACACTGCTAGGGACATGATGGATAAATATTTCATTGGTGAGATT 240 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 290 GACGTTGGTCACAGCGACACTGCAAGGGACATGATGGACAAATATTTCATTGGTGAGATT 349 Query 241 GATTCGTCTAGTGTTCCAGCAACAAGGACATATGTTGCACCGCAGCAACCAGCGTACAAC 300 ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||||| Sbjct 350 GATTCGTCTAGTGTTCCAGCAACTAGGACATACGTTGCACCACAGCAACCAGCCTACAAC 409 Query 301 CAAGACAAGACACCGGAATTCATCATCAAGATTCTTCAGTTCCTTGTTCCGATCTTGATC 360 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 410 CAAGACAAGACACCAGAATTCATTATCAAGATTCTTCAGTTCCTTGTTCCGATCTTGATC 469 Query 361 TTGGGACTGGCTCTTGTCGTCCGTCACTATACCAAGAAAGACTAG 405 |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 470 TTGGGATTGGCTCTTGTCGTCCGTCACTATACCAAGAAAGACTAG 514 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19152012369 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5