BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470161 Length=1525 Score E Sequences producing significant alignments: (Bits) Value AT1G01140.3 | Symbols: CIPK9, PKS6 | CBL-interacting protein ki... 2422 0.0 > AT1G01140.3 | Symbols: CIPK9, PKS6 | CBL-interacting protein kinase 9 | chr1:64167-67625 REVERSE LENGTH=1700 Length=1700 Score = 2422 bits (1311), Expect = 0.0 Identities = 1415/1465 (97%), Gaps = 7/1465 (0%) Strand=Plus/Plus Query 1 GAAGAAGAAAATGAGTGGGAGCAGAAGGAAGGCGACGACGCCGGCGAGTAGGACGCGAGT 60 ||| |||||||||||||| ||||||||||| | | ||||||||||||||||||||||||| Sbjct 104 GAAAAAGAAAATGAGTGGAAGCAGAAGGAA-G-G-CGACGCCGGCGAGTAGGACGCGAGT 160 Query 61 AGGGAATTATGAGATGGGAAGAACTCTAGGAGAAGGAAGCTTCGCTAAGGTGAAATACGC 120 ||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 161 AGGGAATTACGAGATGGGACGAACTCTCGGAGAAGGAAGCTTCGCTAAGGTGAAATACGC 220 Query 121 GAGGAACACCGTCACCGGAGATCAAGCCGCTATCAAAATCCTCGACCGAGAAAAGGTCTT 180 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 221 CAAGAACACCGTCACCGGAGATCAAGCCGCTATCAAAATCCTCGACCGAGAAAAGGTCTT 280 Query 181 CCGTCACAAAATGGTCGAACAGCTTAAAAGAGAGATATCGACAATGAAATTGATTAAACA 240 ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| Sbjct 281 CCGTCACAAAATGGTCGAACAGCTTAAAAGAGAAATATCTACAATGAAACTGATTAAACA 340 Query 241 TCCAAATGTGGTTGAAATCATTGAGGTTATGGCGAGCAAAACGAAGATCTATATCGTTCT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 341 TCCAAATGTGGTTGAAATCATTGAGGTTATGGCGAGCAAAACGAAGATCTATATCGTTCT 400 Query 301 TGAGCTTGTCAATGGAGGTGAACTCTTTGATAAAATCGCGCAACAAGGGAGGCTTAAGGA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 401 TGAGCTTGTCAATGGAGGTGAACTCTTTGATAAAATCGCGCAACAAGGGAGGCTTAAGGA 460 Query 361 GGATGAAGCTCGGAGATATTTTCAGCAGCTCATCAATGCTGTGGATTACTGCCACAGTCG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461 GGATGAAGCTCGGAGATATTTTCAGCAGCTCATCAATGCTGTGGATTACTGCCACAGTCG 520 Query 421 AGGTGTCTACCACAGAGATCTCAAGCCTGAAAATCTTATCCTTGATGCAAATGGGGTTTT 480 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 521 AGGTGTCTACCACAGAGATCTCAAGCCTGAAAATCTGATCCTTGACGCAAATGGGGTTTT 580 Query 481 GAAAGTCTCTGATTTTGGGTTAAGCGCGTTCTCACGACAAGTTCGGGAAGATGGTTTGCT 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 581 GAAAGTCTCTGATTTTGGGTTAAGCGCCTTCTCACGACAAGTTCGGGAAGATGGTTTGCT 640 Query 541 TCACACAGCTTGTGGAACGCCAAACTACGTTGCTCCTGAGGTTTTATCAGACAAAGGCTA 600 ||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct 641 TCATACAGCTTGTGGAACGCCAAACTACGTTGCCCCTGAGGTTTTGTCGGACAAAGGCTA 700 Query 601 TGACGGTGCAGCAGCAGATGTCTGGTCTTGTGGTGTAATTCTCTTTGTGCTCATGGCTGG 660 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 701 TGACGGTGCAGCAGCAGATGTCTGGTCTTGTGGTGTCATTCTCTTTGTGCTTATGGCTGG 760 Query 661 TTACTTGCCTTTTGATGAGCCAAATCTCATGACATTATACAAACGTATATGCAAGGCCGA 720 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 761 TTACTTGCCTTTTGATGAGCCGAATCTCATGACATTATACAAACGTATATGCAAGGCTGA 820 Query 721 GTTTAGCTGCCCACCATGGTTCTCGCAAGGTGCCAAGAGAGTCATTAAGCGTATTCTCGA 780 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 821 GTTTAGCTGCCCACCATGGTTCTCGCAAGGTGCCAAGAGAGTCATCAAGCGTATTCTCGA 880 Query 781 ACCCAACCCTATAACCAGAATAAGTATTGCAGAGCTACTAGAAGATGAATGGTTCAAGAA 840 |||||||||||| ||||||||||||||||||||| | || |||||||||||||||||||| Sbjct 881 ACCCAACCCTATTACCAGAATAAGTATTGCAGAGTTGCTCGAAGATGAATGGTTCAAGAA 940 Query 841 AGGGTACAAGCCGCCATCATTTGACCAAGATGATGAGGACATAACCATAGATGATGTTGA 900 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 941 AGGGTACAAGCCGCCATCATTTGACCAAGATGACGAGGACATAACCATAGATGATGTTGA 1000 Query 901 TGCTGCTTTTAGTAACTCCAAGGAATGTCTTGTAACAGAGAAGAAGGAGAAACCGGTATC 960 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 1001 TGCTGCTTTTAGTAACTCCAAGGAATGTCTTGTAACTGAGAAGAAGGAGAAACCTGTATC 1060 Query 961 CATGAACGCTTTCGAACTTATCTCTAGCTCAAGCGAGTTCAGTCTTGAAAACTTGTTCGA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1061 CATGAACGCTTTCGAACTTATCTCTAGCTCAAGCGAGTTCAGTCTTGAAAACTTGTTCGA 1120 Query 1021 GAAGCAAGCGCAACTTGTGAAGAAAGAAACGCGGTTTACTTCTCAAAGATCTGCGAGTGA 1080 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1121 GAAGCAAGCGCAACTTGTGAAGAAAGAAACGCGGTTTACTTCTCAACGATCTGCGAGTGA 1180 Query 1081 AATAATGTCGAAAATGGAAGAAACCGCAAAGCCATTAGG-TTTCAATGTCCGTAAAGACA 1139 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1181 AATAATGTCGAAAATGGAAGAAACCGCAAAGCCATTAGGCTTT-AATGTCCGTAAAGACA 1239 Query 1140 ACTACAAGATAAAAATGAAAGGAGACAAAAGTGGTCGTAAAGGTCAGCTCTCCGTAGCTA 1199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1240 ACTACAAGATAAAAATGAAAGGAGACAAAAGTGGTCGTAAAGGTCAGCTCTCCGTAGCTA 1299 Query 1200 CAGAGGTGTTTGAAGTGGCGCCATCGTTGCATGTGGTAGAGCTTAGGAAAACCGGCGGTG 1259 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 1300 CAGAGGTGTTTGAAGTGGCGCCATCATTGCATGTGGTAGAGCTTAGGAAAACCGGTGGTG 1359 Query 1260 ATACCCTCGAGTTTCACAAGGTATTTGATCCGTTCTACAAAACCTTCTCATCTGGATTAA 1319 |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| Sbjct 1360 ATACCCTCGAGTTTCACAAGGTATGTGATTCGTTCTACAAAAACTTCTCATCTGGATTAA 1419 Query 1320 AGGATGTAGTCTGGAATACTGATGCAGCCGCTGAAGAACAAAAGCAATAAAAAATAGCAA 1379 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1420 AGGATGTAGTCTGGAATACTGATGCAGCCGCTGAAGAACAAAAGCAATAAGAAATAACAA 1479 Query 1380 GTTGTTCAATTCAAAGTTTTTAATTAAAGTTGAACATGTATAATGAATAGTAAAAAATTC 1439 |||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||| Sbjct 1480 GTTGTTCAATTCAAAGTTTTTAATCAATGTTGAACATGTATAATGAATAGTAAACA-TTC 1538 Query 1440 TGAGAGTTGGCAAAATAGAATTATT 1464 || |||||||||| ||| || |||| Sbjct 1539 TG-GAGTTGGCAATATACAAGTATT 1562 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75250616955 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5