BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470234 Length=919 Score E Sequences producing significant alignments: (Bits) Value AT1G02750.1 | Symbols: | Drought-responsive family protein | c... 1179 0.0 > AT1G02750.1 | Symbols: | Drought-responsive family protein | chr1:602497-604292 FORWARD LENGTH=1000 Length=1000 Score = 1179 bits (638), Expect = 0.0 Identities = 858/955 (90%), Gaps = 52/955 (5%) Strand=Plus/Plus Query 1 GTAGTTTCTTGACA---T-TTTCTG-TATCTCACACACAATTGGGTATTTAGCTGACACG 55 |||||||||||||| | |||||| |||||| |||||||||||||||||||||||||| Sbjct 55 GTAGTTTCTTGACATTTTCTTTCTGCTATCTCTTACACAATTGGGTATTTAGCTGACACG 114 Query 56 ACGAAGGAGG----TC-TCAATTATCTGAGATTTTTATAAAAGCTCCGATTCGTGGAGAT 110 |||||| ||| || |||||||||||||||||||| | ||| | | | || Sbjct 115 ACGAAGAAGGTCTCTCATCAATTATCTGAGATTTTTACATAAG---AAAGGC-T-CCGA- 168 Query 111 TCATAAATCAGATGGAAGACGATATGTGGTGCGTTAGCTCATCTGGTTCTTCAAGAAGCT 170 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 169 -C--AAAGCAGATGGAAGACGATATGTGGTGCGTTAGCTCATCTGGTTCTTCTAGAAGCT 225 Query 171 ATCGATCAGAAACTGCTGCTAAGTATCAATCAGGGCCTTATCTAGATTTGGAAGAGTTTG 230 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 226 ATCGATCGGAAACTGCTGCTAAGTATCAATCAGGGCCTTATCAAGATTTGGAAGAGTTTG 285 Query 231 AAGAAGTT---GACGATATAGCAGTGGAGTA-CCAATGCCCGTTTTGCGCGAGTGATTAT 286 |||||||| |||||||||||||||||||| || ||||||||||||||| ||||||||| Sbjct 286 AAGAAGTTGACGACGATATAGCAGTGGAGTATCC-ATGCCCGTTTTGCGCAAGTGATTAT 344 Query 287 GATTTAATTGAATTGTGTCACCATATCGACGAAGAACATCATCTTGAAGCTAACAATGGG 346 |||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 345 GATTTAGTTGAATTGTGTCACCATATCGACGAAGAACATCGTCATGAAGCTAACAATGGG 404 Query 347 ATATGTCCTGTTTGTAGCAAAAGGGTGAAGATGCATATGGTGGATCATATAACATCACAT 406 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 405 ATATGTCCTGTATGTAGCAAAAGGGTGAAGATGCATATGGTGGATCATATAACATCACAT 464 Query 407 CAT----A------G-AGA-T------AAGGAAATGTCGTACAGGGAAGATCCATATTCA 448 ||| | | ||| | ||||||||||| ||||||||||||||||||| | Sbjct 465 CATAGAGATGTCTTGAAGAGTGAGCAGAAGGAAATGTCTTACAGGGAAGATCCATATTTA 524 Query 449 TCTGATAAATATTTTCAACCTCCTCTTGATGAGTCGCCACCATCTATGACTCATCATCAT 508 |||||||||||| ||||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 525 TCTGATAAATATCTTCAACCTCATCTTGATGAGTTGCCACCATCTATGAATCATCATCAG 584 Query 509 CGTACCTCTAATTTTGTTGTTTCCGATCAATTTTTATCATTCATCGACAATTCTGCGTTA 568 | | ||||||| ||||||||||||||||||||| |||||| |||||||||| ||| Sbjct 585 CATCCCTCTAA---ACATGTTTCCGATCAATTTTTATCGTTCATCAACAATTCTGCATTA 641 Query 569 CCAAATCAGACCAAGCTTGTGCAGCCTGATTCAAGTGTAGAAAACAAGAATCTGATTAAG 628 |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| Sbjct 642 CCAAATCAGACCAAGCTTGTGCTGCCTGATTCAAGTGTAGAAGACAAGAATCCGATTAAG 701 Query 629 GATTCGTCAACAGCAAAAGAAGGG-ACATCGTCGTCTCCTTTATCGGATAGTGATAAATT 687 ||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||||||| Sbjct 702 GATTCGTCAGCAGCAAAAG-AGGGTACATCGTCGTGTCCTTTATCGGATAGTGATAAATT 760 Query 688 GGAGAAGGCAAAGAAGTGTGAGTTTGTACAGGGACTATTGTCATCAGCCATGTTTGGTGA 747 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct 761 GGAGAAGGCAAAGAAGTGTGAGTTTGTACAGGGACTGTTGTCATCAGCCATGTTTGATGA 820 Query 748 TGAATGCGACTTCTTCTGAGTAAAATAAAGATGTGAAGTCGCCAATGGGGAAGGGCAGGT 807 |||||| |||| ||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 821 TGAATGTGACT-CTTCTGAGTAAAATAAAGATGTGAAGTCGCCAATGGGAAAGG-CAGGT 878 Query 808 GATTGTCATTGTTGTAATTT-ATTCAGCTCTATTTATATAT--GCATCTTTTTTACAGAC 864 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 879 GATTGTCATTGTTGTAATTTTATTCAGCTCTATTTATATATATGCATCTTTTTTACAGAC 938 Query 865 ATAACACTAGCTTTAGTCTTATAATATAAGCTGATGAGTTTTCAGTTTGTTTCTT 919 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 939 ATAACACTAGCTTTAGCCTTATAATATAAGCTGATGAGTTTTCAGTTTGTTTCTT 993 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44909327418 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5