BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470286 Length=972 Score E Sequences producing significant alignments: (Bits) Value AT1G03070.1 | Symbols: | Bax inhibitor-1 family protein | chr1... 1439 0.0 > AT1G03070.1 | Symbols: | Bax inhibitor-1 family protein | chr1:729935-731557 FORWARD LENGTH=1019 Length=1019 Score = 1439 bits (779), Expect = 0.0 Identities = 887/939 (94%), Gaps = 8/939 (1%) Strand=Plus/Plus Query 40 AAACAAATTCCGTTACTTAGAATGTATAAGTGGAATCTTCCTTACCGGAAAGATGACGTG 99 |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 78 AAACAAATTCCGTT-TTTAGAATGTATAAGTGGAATCTTCCTTACCGAAAAGATGACGTG 136 Query 100 GAGACCGG-TG-GTA-GCGGTGAGAGATCTCTGTATCCGACTATGCTTGAGAGCCCCGAA 156 |||||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 137 GAGACCGGCCGTGAAGGCGGTGAGAGATCTCTGTATCCGACTATGCTTGAGAGCCCCGAA 196 Query 157 CTCCGATGGGGTTTCATCCGGAAGGTATATTCCATAATCGCATTCCAGCTCTTAGCAACC 216 |||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct 197 CTCCGATGGGGTTTCATCAGAAAGGTATATTCCATAATCGCATTCCAGCTTTTAGCAACC 256 Query 217 ATCGCCGTCGCCTCCACGGTGGTCTTCGTCCGTCCCATTGCGGTGTTCTTCGCCACCACT 276 ||||||||||||||||||||||| || |||||||| || || |||||||||||||| ||| Sbjct 257 ATCGCCGTCGCCTCCACGGTGGTTTTTGTCCGTCCGATCGCCGTGTTCTTCGCCACTACT 316 Query 277 AGTGCCGGTCTTGCTCTCTGGATTGTCTTAATCATCACGCCTCTTATAGTAATGTGTCCT 336 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 317 AGTGCCGGTCTCGCTCTCTGGATTGTCTTAATCATCACGCCTCTTATAGTAATGTGTCCT 376 Query 337 TTGTACTATTACCACCAGAAACATCCGGTGAATTACCTGCTTTTAGGGATTTTCACGGTG 396 |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct 377 TTGTACTATTACCACCAGAAACATCCAGTGAATTATTTGCTTCTAGGGATTTTCACGGTA 436 Query 397 GCTTTAGCTTTTGCCGTTGGATTAACATGTGCTTTCACCAGTGGGAAAGTGATTCTTGAG 456 ||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 437 GCTTTGGCTTTCGCCGTCGGATTAACATGTGCTTTCACCAGCGGGAAAGTGATTCTTGAG 496 Query 457 GCAGCGATTTTGACAACAGTAGTGGTGCTTTCCTTAACCTTTTACACCTTTTGGGCAGCA 516 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 497 GCAGCGATTTTGACAACAGTAGTGGTGCTTTCCTTAACCGTCTACACCTTTTGGGCAGCA 556 Query 517 AAGAAAGGATATGACTTCAATTTCCTTGGTCCATTCTTGTTTGGTGCTCTCATCGTTCTC 576 ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct 557 AAGAAAGGATATGACTTTAACTTCCTCGGTCCATTCTTGTTTGGTGCTCTCATCGTTCTC 616 Query 577 ATGGTCTTTGCCCTTATTCAGATTTTCTTCCCGTTGGGTCGGATCTCAGTGATGATCTAT 636 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 617 ATGGTCTTTGCCCTTATTCAGATTTTCTTCCCGTTGGGACGGATCTCAGTGATGATCTAT 676 Query 637 GGATGTTTGGCTGCGATAATTTTCTGCGGGTACATAGTATACGATACAGACAATCTCATC 696 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 677 GGATGTTTGGCTGCGATAATATTCTGCGGGTACATAGTTTACGATACAGACAATCTCATC 736 Query 697 AAACGTTACAGTTACGATGAGTATATTTGGGCAGCAGTTTCCCTCTACTTAGATATTATC 756 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 737 AAACGTTACAGCTACGATGAGTATATTTGGGCAGCAGTTTCGCTCTACTTAGATATTATC 796 Query 757 AACCTCTTCTTGGCTCTCCTTACCATTTTCAGAGCTGCCGAGTGAAGCTTCTTTACTCCT 816 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 797 AACCTCTTCTTGGCTCTCCTTACCATTTTCAGAGCTGCCGAGTGAAGCTTCTTTACTCCT 856 Query 817 TTT--AAGTCTCGATCAGTGT-ATTATCATATCCTTAAAATGTGTAAATCTCTAATATTG 873 ||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||| Sbjct 857 TTTTTAAGTCTCGATCAGTGTTATTATCATGTTTTTAAAATGTGTAAATCTCTAATATTG 916 Query 874 TTTGTTAACAAAACTCATTTTCTTTGTAGTATTCTCATGTACAAAAACATAACCTGGCAA 933 ||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||| Sbjct 917 TTTGTTAACGAAACTTATTTTCTCTGTAGTATTCTCATGTACAAAA-CATAACCTGGCAG 975 Query 934 TGTATTTTTTAAAGTAATCGAGTAGTATTGGAACTTGCG 972 ||||| ||||||||||||||| |||||||| || ||||| Sbjct 976 TGTATCTTTTAAAGTAATCGAATAGTATTGAAATTTGCG 1014 Score = 75.0 bits (40), Expect = 1e-12 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand=Plus/Plus Query 1 TTTCTCGCATTTTCTCGGGAAAATCGTAAC-AAACAAACAAAACAAATTC 49 |||||||||||||||||||||||||||||| |||||||||||| || ||| Sbjct 18 TTTCTCGCATTTTCTCGGGAAAATCGTAACGAAACAAACAAAATAACTTC 67 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47571737209 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5