BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg470513

Length=3278
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G05200.1 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate rece...  4990    0.0  
  AT2G32390.3 | Symbols: GLR3.5 | glutamate receptor  3.5 | chr2:...  1352    0.0  


> AT1G05200.1 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate receptor 
3.4 | chr1:1505317-1509152 FORWARD LENGTH=3257
Length=3257

 Score = 4990 bits (2702),  Expect = 0.0
 Identities = 2978/3112 (96%), Gaps = 16/3112 (1%)
 Strand=Plus/Plus

Query  178   GGTGTTACTCCAAATATACCAAATGGTTTTATAAGACCAGGACAAAGAGaaaaaaaCCAG  237
             |||||||||||||||| | ||||||||| ||| |||||||||| || ||  |||||| ||
Sbjct  146   GGTGTTACTCCAAATAAATCAAATGGTTATATGAGACCAGGAC-AA-AG--AAAAACTAG  201

Query  238   TGCTTTTGCTGGAAATTGTGATAAAGATGAGATTTTTGGTGACGATAAGAGGAGTTTCTA  297
             ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| |
Sbjct  202   TGCTTTTGCTGGAAATTGTGATAAAGATGGGATTTTTGGTGATGATAAGAGAAGTTTCCA  261

Query  298   TGGCGAAAGCAATCAGAGTTGTGTTGTTATGTCTCTCTGTCTTGTGGGTCGTTCCAAAGG  357
             |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||
Sbjct  262   TGGCGAAAGCAATCAGAGTTGTGTTGTTATGTGTTTCTGTCTTGTGGGTTGTTCCAAAGG  321

Query  358   AATGTGCTTGCAGAAGTAATTTCTCAAGAAACTCG------TCTTCAACTTCTTCTTTGC  411
             |||||||||| |||||||||||||| |||||||||      |||||  ||||||||||||
Sbjct  322   AATGTGCTTGTAGAAGTAATTTCTCTAGAAACTCGTCTTCTTCTTCTTCTTCTTCTTTGC  381

Query  412   CGCCATTATCACAGAAGCCAAGCTCTGTGAATGTTGGAGCTCTGTTTACTTATGATTCTT  471
              |||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  382   GGCCATTAAGACAGAGGCCAAGCTCTGTGAATGTTGGAGCTCTGTTTACTTATGATTCTT  441

Query  472   TTATCGGAAGAGCGGCTAAACCCGCGTTTATAGCGGCAATGGATGATGTTAATGCTGACC  531
             |||||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||
Sbjct  442   TTATCGGAAGAGCGGCTAAACCCGCGGTTAAAGCAGCTATGGATGATGTTAATGCTGACC  501

Query  532   TAACTGTACTTAAGGGCATCAAGCTTAATATTGTTTTTCAAGACTCAAATTGCAGTGGAT  591
              || ||| |||||||||||||||||||||||  | |||||||||||||||||||||||||
Sbjct  502   AAAGTGTTCTTAAGGGCATCAAGCTTAATATCATCTTTCAAGACTCAAATTGCAGTGGAT  561

Query  592   TTATAGGCACCATGGGAGCTTTGCAGCTGATGGAAAACAAAGTGGTTGCAGCCATTGGTC  651
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  562   TTATCGGCACCATGGGAGCTTTGCAGCTGATGGAAAACAAAGTGGTTGCAGCCATTGGTC  621

Query  652   CACAATCTTCAGGGATTGCTCACATGATCTCCTATGTATCTAATGAGCTTCATGTACCTC  711
             |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  622   CACAATCTTCAGGGATTGCTCACATGATCTCCTATGTAGCTAATGAGCTTCATGTACCTC  681

Query  712   TCTTGTCATTTGGAGCAACGGATCCGACTCTCTCCTCTCTGCAATATCCTTATTTCCTCC  771
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  682   TCTTGTCATTTGGAGCAACGGATCCGACTCTCTCCTCTCTGCAATTTCCTTATTTCCTCC  741

Query  772   GCACCACGCAGAATGATTACTTCCAAATGCATGCAATCGCAGATTTTCTATCATATTCCG  831
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  742   GCACCACGCAGAATGATTACTTCCAAATGCATGCGATCGCAGATTTTCTATCATATTCCG  801

Query  832   GATGGAGACAAGTCATTGCGATATTCATTGATGATGAATGTGGTAGGAACGGGATATCTG  891
             |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct  802   GATGGAGACAAGTCATTGCGATATTCGTTGATGATGAGTGTGGCAGGAACGGGATATCTG  861

Query  892   TTCTAGGCGATGTATTAGCCAAGAAACGCTCCAGGATCTCTTACAAGGCTGCAATTACTC  951
             | || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  862   TCCTTGGCGATGTATTAGCCAAGAAACGCTCGAGGATCTCTTACAAGGCTGCAATTACTC  921

Query  952   CTGGTGCAGATTCTAGCTCCATCAAG-GACTTGTTGGTTTCTGTTAATCTGATGGAATCT  1010
             ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct  922   CTGGTGCAGATTCTAGCTCCATC-AGAGACTTGTTGGTTTCTGTTAATCTGATGGAATCT  980

Query  1011  CGGGTTTTTGTTGTTCATGTGAATCCTGACTCTGGTTTAAACGTTTTCTCTGTGGCTAAA  1070
             |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  981   CGGGTTTTTGTTGTCCATGTGAATCCTGACTCTGGTTTAAACGTTTTTTCTGTGGCTAAA  1040

Query  1071  TCTCTTGGAATGATGGGAAGTGGTTATGTTTGGATCGCAACAGACTGGCTTCCTACAGCT  1130
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  1041  TCTCTTGGAATGATGGCAAGTGGTTATGTTTGGATCGCAACAGACTGGCTTCCTACAGCT  1100

Query  1131  ATGGATTCCATGGAGCACGTGGATTCCGACACGATGGATCTCTTGCAAGGAGTGGTTGCT  1190
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  1101  ATGGATTCCATGGAGCACGTGGATTCAGACACGATGGATCTCTTGCAAGGAGTGGTTGCT  1160

Query  1191  TTTCGCCATTACACAATTGAGAGTAGTGTGAAGAGACAGTTTATGGCGAGATGGAGGAGT  1250
             |||||||| |||||||| ||||||||||| || |||||||||||||||||||||| || |
Sbjct  1161  TTTCGCCACTACACAATCGAGAGTAGTGTCAAAAGACAGTTTATGGCGAGATGGAAGAAT  1220

Query  1251  CTTAGACCCAATGATGGCTTCAACTCTTACGCGATGTACGCTTATGATTCTGTCTGGTTA  1310
             |||||||| ||||||||||| |||||||| |||||||| |||||||||||||| ||||||
Sbjct  1221  CTTAGACCAAATGATGGCTTTAACTCTTATGCGATGTATGCTTATGATTCTGTTTGGTTA  1280

Query  1311  GTTGCTCGTGCCCTCGATGTTTTCTTCAGAGAAAACAATAAAATAACTTTCTCCAACGAT  1370
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  1281  GTTGCTCGTGCCCTCGATGTTTTCTTCAGAGAAAACAATAACATAACTTTCTCCAACGAT  1340

Query  1371  CCAAATCTACACAAAACCAATGGTAGCACAATTCAGCTATCAGCACTAAGTGTTTTCAAT  1430
             |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct  1341  CCAAATCTGCACAAAACAAATGGTAGCACTATTCAGCTATCAGCACTAAGTGTTTTCAAT  1400

Query  1431  GAAGGGGAGAAGTTTATGAAGATCATTCTTGGGATGAATCATACTGGTGTGACGGGCCCA  1490
             ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  1401  GAAGGAGAGAAGTTTATGAAGATCATTCTTGGGATGAATCATACTGGTGTGACGGGTCCA  1460

Query  1491  ATCCAGTTTGATTCAGATAGAAACCGGGTTAACCCGGCTTATGAAGTTCTAAACTTAGAA  1550
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  1461  ATCCAGTTTGATTCAGATAGAAACCGGGTTAATCCGGCTTATGAAGTTCTAAACTTAGAA  1520

Query  1551  GGTACAGGTCCACGCACAGTCGGGTACTGGTCAAATCATTCGGGTCTCTCTGTGGTCCAT  1610
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1521  GGTACAGCTCCACGCACAGTCGGGTACTGGTCAAATCATTCGGGTCTCTCTGTGGTCCAT  1580

Query  1611  CCAGAGACCTTGTACTCTAAGCCTCCAAACACATCTACAGCAAACCAGCGTCTTCATGGA  1670
             ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||
Sbjct  1581  CCAGAGACCTTGTACTCTAGGCCTCCAAACACATCTACAGCAAACCAGCGTCTTAAAGGA  1640

Query  1671  ATCATATGGCCAGGCGAAGTAACTAAGCCTCCTCGTGGTTGGGTGTTTCCTAATAATGGA  1730
             |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1641  ATCATATATCCAGGAGAAGTAACTAAGCCTCCTCGTGGTTGGGTGTTTCCTAATAATGGA  1700

Query  1731  AAACCGCTCAGAATCGGGGTGCCTAACCGTGTGAGCTATACAGAATACGTTTCTAAGGAT  1790
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  1701  AAACCGCTCAGAATCGGGGTGCCTAACCGTGTGAGCTATACAGATTACGTTTCTAAGGAT  1760

Query  1791  AAGAACCCGCCTGGCGTTAGAGGCTACTGCATTGATGTCTTTGAAGCCGCAATTGAATTG  1850
             || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  1761  AAAAACCCGCCTGGCGTTAGAGGCTACTGCATTGATGTCTTTGAAGCCGCTATTGAATTG  1820

Query  1851  CTTCCATATCCTGTTCCACGTACTTATATACTATATGGAGACGGGAAGAGAAATCCTTCT  1910
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1821  CTTCCATATCCTGTTCCACGTACTTATATACTATATGGAGACGGGAAGAGAAATCCTTCT  1880

Query  1911  TACGATAATCTCGTCAATGAAGTGGTTGCAGATAATTTTGATGTAGCTGTAGGAGATATC  1970
             || ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct  1881  TATGATAACCTCGTCAATGAAGTTGTTGCGGATAATTTTGATGTAGCTGTAGGAGATATC  1940

Query  1971  ACAATCGTTACAAACAGAACAAGATATGTAGATTTCACACAACCGTTTATAGAATCAGGG  2030
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1941  ACAATCGTCACAAACAGAACAAGATATGTAGATTTCACACAACCGTTTATAGAATCAGGG  2000

Query  2031  CTTGTGGTAGTGGCTCCGGTTAAGGAGGCCAAGTCTAGTCCTTGGTCATTCCTGAAACCA  2090
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2001  CTTGTGGTGGTGGCTCCGGTTAAGGAGGCCAAGTCTAGTCCTTGGTCATTCCTGAAACCA  2060

Query  2091  TTCACTATAGAGATGTGGGCTGTCACTGGAGCCTTCTTTCTCTTTGTGGGAGCCATGGTC  2150
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  2061  TTCACTATAGAGATGTGGGCTGTCACTGGAGGCTTCTTTCTCTTTGTGGGAGCCATGGTC  2120

Query  2151  TGGATTCTCGAACACCGCTTCAACCAAGAATTCCGTGGCCCTCCTAGGCGTCAACTCATT  2210
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2121  TGGATTCTCGAACACCGCTTCAACCAAGAATTCCGTGGCCCTCCTAGGCGTCAACTCATT  2180

Query  2211  ACCATCTTCTGGTTTAGCTTCTCAACGATGTTCTTCTCTCATAGGGAGAACACGGTGAGT  2270
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  2181  ACCATCTTCTGGTTTAGCTTCTCAACAATGTTCTTCTCTCATAGGGAGAACACGGTGAGT  2240

Query  2271  TCACTGGGGAGGCTGGTGCTGATCATTTGGTTATTCGTGGTTCTGATCATCAACTCGAGC  2330
             |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2241  TCACTGGGGAGGTTTGTGCTGATCATTTGGTTATTCGTGGTTCTGATCATCAACTCGAGC  2300

Query  2331  TACACGGCCAGTCTCACTTCAATCCTAACCGTTCGACAGCTGACATCTCGGATTGAAGGA  2390
             |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct  2301  TACACGGCCAGTCTCACTTCGATCCTAACCATTCGACAGCTGACATCTCGGATTGAAGGA  2360

Query  2391  ATAGATAGCTTGGTAACGAGCAATGAACCAATTGGAGTTCAAGACGGTACCTTTGCTCGG  2450
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2361  ATAGATAGCTTGGTAACGAGCAATGAACCAATTGGAGTTCAAGACGGTACCTTTGCTCGG  2420

Query  2451  AACTATCTAATCAACGAGCTTAACATACTTCCTTCGAGGATTGTTCCACTGAAAGACGAA  2510
             ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct  2421  AACTATCTAATCAACGAGCTTAACATACTACCTTCAAGGATTGTTCCTCTGAAAGACGAA  2480

Query  2511  GAACAGTACCTTTCTGCTCTACATCGTGGTCCCAAAGCTGGCGGCGTGGCAGCCATTGTA  2570
             |||||||||||||||||||| || || |||||||| |||||||| |||||||||||||||
Sbjct  2481  GAACAGTACCTTTCTGCTCTGCAACGCGGTCCCAACGCTGGCGGTGTGGCAGCCATTGTA  2540

Query  2571  GACGAGCTTCCTTACATCGAAGTTCTTTTGACAAATAGCAACTGCAAGTTCCGTACAGTA  2630
             || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  2541  GATGAGCTTCCTTACATCGAAGTTCTTTTGACAAATAGCAACTGCAAATTCCGTACAGTA  2600

Query  2631  GGACAAGAATTCACACGCACAGGCTGGGGTTTCGCATTCCAGAGAGACTCCCCTTTAGCT  2690
             || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  2601  GGGCAAGAGTTCACACGCACAGGCTGGGGTTTCGCATTCCAGAGAGATTCCCCTTTAGCT  2660

Query  2691  GTAGACATGTCAACGGCTATCTTGCAACTCTCTGAAGAAGGCGAGCTCGAGAAAATCCAC  2750
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct  2661  GTAGACATGTCAACGGCTATCTTGCAACTATCTGAAGAAGGCGAGCTCGAGAAAATCCAT  2720

Query  2751  AGGAAATGGCTTAACTACAAGCATGAATGCTCGATGCAGATCTCACACAGTGAGGACTCT  2810
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  2721  AGGAAATGGCTTAACTACAAGCATGAATGCTCGATGCAGATCTCAAACAGTGAGGACTCT  2780

Query  2811  CAGCTTTCACTTAAGAGTTTCTGGGGACTCTTCCTTATCTGTGGCATCACTTGCTTCATG  2870
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2781  CAGCTTTCACTAAAGAGTTTCTGGGGACTCTTCCTTATCTGTGGCATCACTTGCTTCATG  2840

Query  2871  GCACTCACTGTCTTCTTCTGGAGGGTTTTCTGGCAATACCAGAGGTTGCTACCAGAAAGT  2930
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2841  GCACTCACTGTCTTCTTCTGGAGGGTTTTCTGGCAATACCAGAGGTTGCTACCAGAAAGT  2900

Query  2931  GCAGATGAGGAAAGGGCAGGCGAGGTGTCTGAGCCATCTCGATCAGGGAGGGGTTTACGA  2990
             || || ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||
Sbjct  2901  GCGGACGAGGAAAGGGCAGGCGAAGTGTCTGAGCCATCTCGATCAGGGAGAGGTTCACGA  2960

Query  2991  GCACCGAGTTTCAAGGAACTGATAAAAGTTGTGGATAAGAGGGAAGCAGAGATCAAGGAG  3050
             |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct  2961  GCACCGAGTTTCAAGGAATTGATAAAAGTTGTGGATAAGAGGGAAGCAGAGATCAAGGAG  3020

Query  3051  ATACTGAAGCAGAAGAGTAGCAAGAAACTCAAAACTATCCAAAGTGCAGCTGGGACTTCA  3110
             ||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct  3021  ATACTTAAGCAGAAGAGTAGCAAGAAACTCAAAAGTACCCAAAGTGCAGCTGGGACTTCA  3080

Query  3111  CAATCACAACATGGCGAAATTACTTAAACAGATAAGAGTTTAAATGACTATTAACATAG-  3169
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  
Sbjct  3081  CAATCACAACATGGCGAAATTACTTAATCAGATAAGAGTTTAAATGACTATTAACATACT  3140

Query  3170  -AGGGGG-AA-TAAACTTGTCAGTAGATTTTGTAATAGGAAAGTTCAAGGAACCACAGAC  3226
              || ||| || |||||||||||| ||||||||||||||||||||||||||||||||| | 
Sbjct  3141  TAGAGGGTAAATAAACTTGTCAGAAGATTTTGTAATAGGAAAGTTCAAGGAACCACAAAG  3200

Query  3227  CAAAGCTAAATTGTAAATCTTTTTTCTGAGACGTAATGAAAAAATCATCTTC  3278
             |||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct  3201  CAAAGCTAAATTGTAAATCTTTTTTCTGAGTCGTAATGAAAAAAGCATCTTC  3252


> AT2G32390.3 | Symbols: GLR3.5 | glutamate receptor  3.5 | chr2:13748441-13751933 
REVERSE LENGTH=2749
Length=2749

 Score = 1352 bits (732),  Expect = 0.0
 Identities = 1360/1656 (82%), Gaps = 72/1656 (4%)
 Strand=Plus/Plus

Query  428   GCCAAGCTCTGTGAATGTTGGAGCTCTGTTTACTTATGATTCTTTTATCGGAAGAGCGGC  487
             |||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||
Sbjct  142   GCCAAGCTCTGTAAACGTTGGAGCTCTGTTTACTTATGATTCTTTCATTGGAAGAGCGGC  201

Query  488   TAAACCCGCGTTTATAGCGGCAATGGATGATGTTAATGCTGACCTA-ACTGTACTTAAGG  546
              ||||  |||||| | ||||| || || ||  |||||||||||| | | | | || | ||
Sbjct  202   CAAACTTGCGTTTGTGGCGGCCATTGAAGACATTAATGCTGACC-AGAGTATCCTCAGGG  260

Query  547   GCATCAAGCTTAATATTGTTTTTCAAGACTCAAATTGCAGTGGATTTATAGGCACCATGG  606
             ||| ||||||||||||||| || || ||| | ||||||||||||||| | ||||||||||
Sbjct  261   GCACCAAGCTTAATATTGTCTTCCAGGACACTAATTGCAGTGGATTTGTTGGCACCATGG  320

Query  607   GAGCTTTGCAGCTGATGGAAAACAAAGTGGTTGCAGCCATTGGTCCACAATCTTCAGGGA  666
             ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct  321   GAGCTTTGCAGCTAATGGAGAACAAGGTGGTTGCAGCCATTGGTCCACAATCTTCAGGAA  380

Query  667   TTGCTCACATGATCTCCTATGTATCTAATGAGCTTCATGTACCTCTCTTGTCATTTGGAG  726
             ||| |||||| |||||| ||||| |||||||||||||||||||| |||||||||||| ||
Sbjct  381   TTGGTCACATAATCTCCCATGTAGCTAATGAGCTTCATGTACCTTTCTTGTCATTTGCAG  440

Query  727   CAACGGATCCGACTCTCTCCTCTCTGCAATATCCTTATTTCCTCCGCACCACGCAGAATG  786
             ||||||| |||||||| || || || ||||| ||||||||||| || ||||| |||||||
Sbjct  441   CAACGGACCCGACTCTTTCTTCGCTTCAATACCCTTATTTCCTTCGTACCACACAGAATG  500

Query  787   ATTACTTCCAAATGCATGCAATCGCAGATTTTCTATCATATTC-CGGATGGAGACAAGTC  845
             |||||||||| ||| |||||||| | |||||| |||| ||||  || ||||||| |||| 
Sbjct  501   ATTACTTCCAGATGAATGCAATCACGGATTTTGTATCCTATTTTCG-ATGGAGAGAAGTT  559

Query  846   ATTGCGATATTCATTGATGATGAATGTGGTAGGAACGGGATATCTGT-TCTAGGCGATG-  903
              ||||||| ||  | |||||||| | ||||||||| || |||||||| | |||| |||| 
Sbjct  560   GTTGCGATCTTTGTGGATGATGAGTATGGTAGGAATGGAATATCTGTAT-TAGGTGATGC  618

Query  904   TATTAGCCAAGAAACGCT-CCAGGATCTCTTACAAGGCTGCAATTACTCCTGGTGCAGAT  962
             | |||||||||||||| | ||| ||||||||||||||||||| || | ||||||||||||
Sbjct  619   T-TTAGCCAAGAAACG-TGCCAAGATCTCTTACAAGGCTGCATTTCCACCTGGTGCAGAT  676

Query  963   TCTAGCTCCATCAAG-GACTTGTTGGTTTCTGTTAATCTGATGGAATCTCGGGTTTTTGT  1021
               |||||| |||| | || || |||| ||||||||||||||||||||||||  | |||||
Sbjct  677   AATAGCTCAATCA-GTGATTTATTGGCTTCTGTTAATCTGATGGAATCTCGCATCTTTGT  735

Query  1022  TGTTCATGTGAATCCTGACTCTGGTTTAAACGTTTTCTCTGTGGCTAAATCTCTTGGAAT  1081
             |||||||||||||||||| || ||||||||| | |||||||| || ||||||||||||||
Sbjct  736   TGTTCATGTGAATCCTGATTCGGGTTTAAACATATTCTCTGTCGCCAAATCTCTTGGAAT  795

Query  1082  GATGGGAAGTGGTTATGTTTGGATCGCAACAGACTGGCTTCCTACAGCTATGGATTCCAT  1141
             |||||||||||| ||||| |||||| | || || ||||||| ||||||| ||||||||||
Sbjct  796   GATGGGAAGTGGCTATGTCTGGATCACTACTGATTGGCTTCTTACAGCTTTGGATTCCAT  855

Query  1142  GGAGCACGT-GGATTCC-GACACGATGGATCTCTTGCAAGGAGTGGTTGCTTTTCGCCAT  1199
             ||| | ||| |||| || ||  |  ||||||||||||||||||||||||| ||||| |||
Sbjct  856   GGAAC-CGTTGGATCCCAGAG-CTTTGGATCTCTTGCAAGGAGTGGTTGCATTTCGTCAT  913

Query  1200  TACACAATTGAGAGT-AGTGTGAAGAGACAGTTTATGGCGA-GATGGAGGAGTCTTAGAC  1257
             ||||||  ||||||| |     |||||||||||||  | || ||||||  |  |||||| 
Sbjct  914   TACACACCTGAGAGTGACAAC-AAGAGACAGTTTAAAG-GAAGATGGAAAAACCTTAGAT  971

Query  1258  -C---------C-AA----TGATG--G-CTTCAACTCTTACGCGATGTACGCTTATGATT  1299
              |         | ||    |||||  | |||||| ||||||||| |||| ||||| ||||
Sbjct  972   TCAAGGAGAGTCTAAAAAGTGATGATGGCTTCAATTCTTACGCGCTGTATGCTTACGATT  1031

Query  1300  CTGTCTGGTTAGTTGCTCGTGCCCTCGATGTTTTCTTCAGAGAAAACAATAAAATAACTT  1359
             |||| ||||| || ||||| || |||||||||||||||||  ||  ||||| | | ||||
Sbjct  1032  CTGTTTGGTTGGTAGCTCGCGCTCTCGATGTTTTCTTCAGCCAAGGCAATACAGTGACTT  1091

Query  1360  TCTCCAACGATCCAAATCTACACAAA-ACCAATGGTAGCA-CAATTCAGCTATCAGCACT  1417
             |||| || ||||||| |||  |  || ||||| | ||||  || || ||||||||  |||
Sbjct  1092  TCTCTAATGATCCAAGTCTG-AGGAATACCAACGATAGCGGCA-TTAAGCTATCAAAACT  1149

Query  1418  A-AGTGTTTTCAATGAAGGGGAGAAGTT-TATGAAGATCATTCTTGGGATGAATCATACT  1475
               |   |||||||||||||||||| ||| | || || ||||||||| ||||||| |||| 
Sbjct  1150  TCACA-TTTTCAATGAAGGGGAGAGGTTCT-TGCAGGTCATTCTTGAGATGAATTATACA  1207

Query  1476  GGTGTGACGGGCCCAATCCAGTTTGATTCAGATAGAAACCGGGTTAACCCGGCTTATGA-  1534
             ||| |||| || | |||| ||||| ||||||| | ||||||| |||| || || || || 
Sbjct  1208  GGTCTGACTGGACAAATCGAGTTTAATTCAGAGAAAAACCGGATTAATCCAGCCTACGAC  1267

Query  1535  AGTTCTAAACTTAGAAGGTACAGGTCCAC-GCACAGTCGGGTACTGGTCAAATCATTCGG  1593
             | |||| ||| || || |||||||||||| | | ||| || |||||||| |||||| | |
Sbjct  1268  A-TTCTGAACATAAAAAGTACAGGTCCACTG-AGAGTTGGATACTGGTCGAATCATACAG  1325

Query  1594  GTCTCTCTGT-G-GTCCATCCAGAGACCTTGTACTCTAAGCCTCCAAACACATCTACAGC  1651
             || |||| || | | || ||||||||| || |||||||||||| ||||||||||| ||  
Sbjct  1326  GTTTCTCAGTCGCG-CC-TCCAGAGACATTATACTCTAAGCCTTCAAACACATCTGCAA-  1382

Query  1652  AA-ACCAGCGTCTTCATG-GAATCATATGGCCAGGCGAAGTAACTAA-GCCTCCTCGTGG  1708
             || |||| |||||| ||| || ||||||||||||| ||||||| ||| ||| ||||| ||
Sbjct  1383  AAGACCAACGTCTTAATGAGA-TCATATGGCCAGGGGAAGTAA-TAAAGCCACCTCGGGG  1440

Query  1709  TTGGGTGTTTCC-T-AATAATGGAAAACCGCTCAGAATCGGGGTGCCTAACCGTGTGAGC  1766
             |||||| ||||| | || |||||||| ||||| | ||||||||||||||||||||| |||
Sbjct  1441  TTGGGT-TTTCCCTGAA-AATGGAAAGCCGCTGAAAATCGGGGTGCCTAACCGTGTAAGC  1498

Query  1767  TATACAGAA-TACGTTTCTAAGGATAAGAACCCGCCTGGCGTTAGAGGCTACTGCATTGA  1825
             || | | || || | ||||||||| |||||||||| ||| |||| |||||  ||||| ||
Sbjct  1499  TACAAA-AACTATGCTTCTAAGGACAAGAACCCGCTTGGTGTTAAAGGCTTTTGCATCGA  1557

Query  1826  TGTCTTTGAAGCCGCAATTGAATTGCTTCCATATCCTGTTCCACGTACTTATATACTATA  1885
               |||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||
Sbjct  1558  CATCTTTGAAGCTGCGATTCAATTGCTTCCATATCCCGTTCCACGTACTTATATACTATA  1617

Query  1886  TGGAGACGGGAAGAGAAATCCTTCTTACGATAATCTCGTCAA-TGAAGTGGTTGCAGATA  1944
             ||| |||||||||| ||||||||| || || |||||| | || |||||| | |||| |||
Sbjct  1618  TGGGGACGGGAAGAAAAATCCTTCATATGACAATCTCAT-AAGTGAAGTTGCTGCAAATA  1676

Query  1945  ATTTT-GATGTAGCTGTAGGAGATATCACAATCGTTACAAACAGAAC-AAGATATGTAGA  2002
              |||| ||||||||||| || ||| | || ||| ||||||||||||| ||| | ||||||
Sbjct  1677  -TTTTCGATGTAGCTGTTGGGGATGTTACCATCATTACAAACAGAACCAAGTT-TGTAGA  1734

Query  2003  TTTCACACAACCGTTTATAGAATCAGGGCTTGTGGT  2038
             |||||| || || |||||||||||||||||||||||
Sbjct  1735  TTTCACGCAGCCATTTATAGAATCAGGGCTTGTGGT  1770



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 163092731693


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5