BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470702
Length=1660
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06800.1 | Symbols: PLA-I{gamma}1 | alpha/beta-Hydrolases su... 2512 0.0
AT2G30550.2 | Symbols: | alpha/beta-Hydrolases superfamily pro... 992 0.0
> AT1G06800.1 | Symbols: PLA-I{gamma}1 | alpha/beta-Hydrolases
superfamily protein | chr1:2089417-2091686 REVERSE LENGTH=1912
Length=1912
Score = 2512 bits (1360), Expect = 0.0
Identities = 1535/1620 (95%), Gaps = 9/1620 (1%)
Strand=Plus/Plus
Query 41 TATTTTATACAAGAGTGCAATAAATTTCGTTACGACTTTGAAACTCATCAAGCTTTCAAC 100
||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 183 TATATTATAAAAGAGTGCAATAAATTTGGTTACGACTTTGAAACTCATCGAGCTTTCAAC 242
Query 101 AATGGCGGCCATTCCCTCCCACAACTTTCACCTTCGTCTTCCTCATATGATCAACCAAAG 160
||||||| |||||||||||||| | ||||||| |||||||| || |||||||||
Sbjct 243 AATGGCGACCATTCCCTCCCAC-A-----ACCTTCG---TCCTCATACGACCAACCAAAG 293
Query 161 GACTCAGTACTCTCTTTCCCTCAAACCACACTTTTCACACTCTACTCTTATCACTTTTCC 220
||||||||||||||||||| ||| |||||||||||||| ||||||||| |||||||| ||
Sbjct 294 GACTCAGTACTCTCTTTCCTTCAGACCACACTTTTCACGCTCTACTCTGATCACTTTCCC 353
Query 221 GACGAGAGCATCGCCGGCGAGGGCTATGTCCACAACCGACGAGGAGGCTTCAATATCTAC 280
| | ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 354 GGCAAGATCATCGCCGGCGAGGGCTATGTCCAGAACCGACGAGGAGGCTTCAATATCTAC 413
Query 281 AAGGCTCGAGCCAGAAAGCTATGGGCTGACGACGGCGGAGGACATCCGCCGACGGGATAG 340
||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||| |
Sbjct 414 AAGGCTCGAGCAAGAAAGCTATGGGCTGACGACGGCAGAGGACATTCGCCGACGGGATGG 473
Query 341 AGAAGCTAAAGAATCCAAGAGGTTGAGAGACACGTGGCGGAAGATCCAAGGGGAAGATGA 400
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 AGAAGCAAAAGAATCCAAGAGGTTGAGAGACACGTGGCGGAAGATCCAAGGGGAAGATGA 533
Query 401 TTGGGCCGGGTTAATGGATCCTATGGACCCGGTTCTGAGATCCGAACTGATCCGGTACGG 460
||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 534 TTGGGCCGGGTTAATGGATCCGATGGACCCGGTTCTGAGATCTGAGCTGATCCGGTACGG 593
Query 461 AGAAATGGCCCAGGCCTGTTACGACGCCTTCGATTTCGATCCATTCTCAAGGTACTGTGG 520
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 594 AGAAATGGCCCAGGCCTGTTACGACGCCTTCGATTTCGATCCATTTTCAAGGTACTGCGG 653
Query 521 GAGCTGCAGATTCACGCGCCGTCACCTGTTCGATTCGCTCGGGATACTCGATTCCGGCTA 580
||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||
Sbjct 654 GAGCTGCAGATTCACGCGCCGTCACTTGTTCGATTCGCTCGGGATAATCGATTCTGGCTA 713
Query 581 CGAGGTGGCGCGTTATCTCTACGCGACGTCGAACATCAACCTCCCTAACTTCTTCTCGAA 640
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 714 TGAGGTGGCGCGTTATCTCTACGCGACGTCGAACATCAACCTTCCTAATTTCTTCTCCAA 773
Query 641 ATCGAGATGGTCCAAGGTGTGGAGCAAGAACGCCAATTGGATGGGTTACGTGGCGGTTTC 700
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 774 ATCGAGATGGTCCAAGGTGTGGAGCAAGAACGCCAATTGGATGGGTTACGTGGCTGTATC 833
Query 701 CGACGACGACGAAGCCACGCGCTGCCGTTTAGGACGCCGCGACATCGCGATCGCATGGAG 760
||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct 834 CGACGACAACGAAGCCACGCGCTGCCGTTTAGGACGCCGCGACATTGCCATCGCCTGGAG 893
Query 761 AGGGACCGTCACGCGGCTCGAGTGGATAGCGGATCTCAAGGATTTCCTCAAACCGGTATC 820
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 894 AGGGACTGTCACGCGGCTCGAGTGGATAGCTGATCTCAAGGATTTCCTCAAACCGGTATC 953
Query 821 CGGAAACGGTTTCCGGTGCCCCGACCCGGCCGTTAAAGCCGAATCCGGGTTTCTGGATCT 880
||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 954 CGGAAACGGATTCCGATGCCCCGACCCGGCCGTAAAAGCCGAATCCGGGTTTCTGGATCT 1013
Query 881 CTACACGGACAAAGACACGTCCTGCAATTTCTCAAAATTCTCGGCGCGTGAACAAGTTCT 940
|||||||||||||| || |||||||||||||| |||||||||||||| || || |||||
Sbjct 1014 ATACACGGACAAAGATACATCCTGCAATTTCTCCAAATTCTCGGCGCGAGAGCAGGTTCT 1073
Query 941 GACGGAAGTGAAGCGGCTGGTGGAAAGGTACGGCGATGAGGAAGAAGAAGAACTGAGCAT 1000
||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 1074 TACGGAAGTGAAGCGGCTGGTGGAAAGGTACGGCGACGAGGAAGGAGAAGAACTGAGCAT 1133
Query 1001 CACCGTGACGGGACACAGTCTCGGCGGTGCGTTGGCGGTACTAAGCGCGTACGACGTGGC 1060
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 1134 CACCGTGACGGGACACAGTCTCGGCGGTGCGCTGGCGGTGCTAAGCGCGTACGACGTGGC 1193
Query 1061 GGAGATGGGTCTGAACAGAACTAGGAAAGGAAAAGTGATTCCGGTGACGGCGTTCACGTA 1120
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1194 GGAGATGGGTGTGAACAGAACGAGGAAAGGAAAAGTGATTCCGGTGACGGCGTTCACGTA 1253
Query 1121 CGGAGGACCGCGCGTTGGGAACATACGATTCAAGGAGAGGATTGAGGAATTGGGAGTGAA 1180
|||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1254 CGGAGGACCGCGAGTTGGGAACATTCGATTCAAGGAGAGGATTGAGAAATTGGGAGTGAA 1313
Query 1181 GGTGTTGAGGGTGGTGAACGAGCACGACGTCGTGGCTAAGTCGCCGGGACTGTTTCTGAA 1240
||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1314 GGTGTTGAGAGTGGTGAACGAGCACGACGTCGTGGCGAAATCGCCGGGACTGTTTCTGAA 1373
Query 1241 CGAGCGTGCACCACAGGCGCTAATGAAATTGGCGGGAGGATTGCCGTGGTGCTATAGCCA 1300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 CGAGCGTGCGCCACAGGCGCTAATGAAATTGGCGGGAGGATTGCCGTGGTGCTATAGCCA 1433
Query 1301 CGTGGGGGAAATGCTGCCGTTGGATCATCAGAAGTCGCCGTTCCTTAAGCCCACCGTTGA 1360
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1434 CGTGGGAGAAATGCTGCCGTTGGATCATCAGAAGTCTCCGTTCCTTAAGCCCACCGTTGA 1493
Query 1361 TCTTTCAACTGCTCATAACTTGGAAGCTCTCCTCCATCTCCTTGACGGGTATCATGGGAA 1420
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 TCTTTCTACGGCTCATAACTTGGAAGCTCTCCTCCATCTCCTTGACGGGTATCATGGGAA 1553
Query 1421 AGGGCAGAGATTTGTGTTATCAAGTGGGAGAGATCCAGCGTTAGTGAACAAAGCATCTGA 1480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 AGGACAGAGATTTGTGTTATCAAGTGGGAGAGATCCAGCGTTAGTGAACAAAGCATCTGA 1613
Query 1481 TTTTTTGAAAGACCATTTCATGGTCCCTCCCTATTGGCGCCAAGACGCAAACAAAGGGAT 1540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1614 TTTTTTGAAAGACCATTTCATGGTCCCTCCTTATTGGCGCCAAGACGCAAACAAAGGGAT 1673
Query 1541 GGTCAGGAACACTGACGGCCGTTGGATTCAACCAGATCGCATCCGTGCAGATGATCATCA 1600
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1674 GGTGAGGAACACTGACGGCCGTTGGATTCAACCTGATCGCATCCGTGCAGATGATCAACA 1733
Query 1601 TGCTCCTGACATACATCAACTTCTCACCCAACTCCACCATCCATCACAACTCTTGTAATT 1660
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1734 TGCTCCTGACATACATCAACTCCTCACCCAACTCCATCATCCATCACAACTCTTGTAATT 1793
> AT2G30550.2 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:13014848-13017153 FORWARD LENGTH=1774
Length=1774
Score = 992 bits (537), Expect = 0.0
Identities = 1088/1350 (81%), Gaps = 53/1350 (4%)
Strand=Plus/Plus
Query 311 GACGGCGGAGGACATCCGCCGACGGGATAGAGAAGCTAAAGAATCCAAG-AGGTTGAGAG 369
||||||||| || || ||||| || |||| | || | ||||| ||| || | ||||
Sbjct 285 GACGGCGGAAGATATTCGCCGGCGAGATAAAAAAACCGAAGAA-GAAAGAAGACTAAGAG 343
Query 370 ACACGTGGCGGAAGATCCAAGGGGAAGATGATTGGGCCGGGTTAATGGATCCTATGGACC 429
|||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| |
Sbjct 344 ACACGTGGCGTAAGATCCAAGGAGAAGACGATTGGGCCGGGTTAATGGATCCAATGGATC 403
Query 430 CGGTTCTGAGATCCGAACTGATCCGGTACGGAGAAATGGCCCAGGCCTGTTACGACGCCT 489
| |||| ||||| || || ||||| ||||| |||||||| || || ||||||||||| |
Sbjct 404 CAATTCTTAGATCGGAGCTAATCCGTTACGGCGAAATGGCTCAAGCTTGTTACGACGCTT 463
Query 490 TCGATTTCGAT-CC-ATTCTCAAGGTACTGTGGGAGCTGCAGATTCACGCGCCGTC-ACC 546
||||||||||| || ||| ||| ||||| || | || ||| |||||||| | || |
Sbjct 464 TCGATTTCGATCCCGCTTC-CAA-ATACTGCGGCACCTCCAGGTTCACGCGAC-TCGAGT 520
Query 547 TGTTCGATTCGCTCGGGAT-ACTCGATTCCGGCTACGAGGTGGCGCGTTATCTCTACGCG 605
| |||||||| ||||| || | |||||||||| ||||||||||||||||| |||||||||
Sbjct 521 TCTTCGATTCTCTCGGAATGA-TCGATTCCGGTTACGAGGTGGCGCGTTACCTCTACGCG 579
Query 606 ACGTCGAACATCAACCTCCCTAACTTCTTCTCGAAATCGAGATGGTCCAAGGTGTGGAGC 665
|||||||||||||| ||||| |||||||||||||||||| | ||||| || || ||||||
Sbjct 580 ACGTCGAACATCAATCTCCCGAACTTCTTCTCGAAATCGCGGTGGTCTAAAGTCTGGAGC 639
Query 666 AAGAACGCCAATTGGATGGGTTACGTGGCGGTTTCCGACGACGACGAAGCCACGCGCT-G 724
|| ||||| ||||||||||| ||||| || |||| | | ||||||||| | | || |
Sbjct 640 AAAAACGCTAATTGGATGGGATACGTCGCCGTTT-C-A-GACGACGAAACGTCTCG-TAA 695
Query 725 CCGTTTAGGACGCCGCGACATCGCGATCGCATGGAGAGGGACCGTCACGCGGCTCGAGTG 784
||| | || ||||| || |||||||| || |||||||| ||||| ||| || || ||
Sbjct 696 CCGACTCGGCCGCCGTGATATCGCGATTGCGTGGAGAGGAACCGTTACGAAACTTGAATG 755
Query 785 GATAGCGGATCTCAAGGATT-TCCTCAAACCGGTATCCGGAAAC-GGTTTCCGGTGCCCC 842
||| |||||||| ||||||| | | ||||||||| ||| |||| | |||| ||||||
Sbjct 756 GATCGCGGATCTAAAGGATTAT-TTAAAACCGGTAACCGAAAACAAG-ATCCGATGCCCC 813
Query 843 GACCCGGCCGTTAAAGCCGAATCCGGGTTTC-TGGATCTCTACACGGACAAAGACACGTC 901
|||||||||||||||| ||||||| || ||| | ||||||||||| ||||||||||| |
Sbjct 814 GACCCGGCCGTTAAAGTCGAATCC-GGATTCTTAGATCTCTACACTGACAAAGACACAAC 872
Query 902 CTGCAATTTCTCAAAATTCTCGGCGCGTGAACAAG-TTCTGACGGAAGTGAAGCGGCTGG 960
|||||| ||| | | |||||| |||||||||| || || | ||||| ||||| ||| | |
Sbjct 873 CTGCAAATTCGCGAGATTCTCAGCGCGTGAAC-AGATTTTAACGGAGGTGAAACGGTTAG 931
Query 961 TGGAAAG-GTACGGCGATGAGGAAGAAGAAGAACTGAGCATCACCGTGACGGGACACAGT 1019
||| ||| ||||||| || || || || | ||||||||||||||||||||||||
Sbjct 932 TGG-AAGAACACGGCGACGACGATGATTCCGATTTAAGCATCACCGTGACGGGACACAGT 990
Query 1020 CTCGGCGGTGCGTTGGCGGTACTAAGCGCGTACGACGTGGCGGAGATGGG-TCTGAA-CA 1077
|||||||| ||||| ||| || ||||||||||||| | ||||||||| | | |||| |
Sbjct 991 CTCGGCGGCGCGTTAGCGATATTAAGCGCGTACGATATAGCGGAGATGAGAT-TGAATCG 1049
Query 1078 GAACTAGGAAAGGAAAAGTGATTCCGGTGACGGCGTTCACGTACGGAGGACCGCGCGTTG 1137
|| || |||||| ||||||||||||||||||| ||| || |||||||||||| | ||||
Sbjct 1050 GAG-TAAGAAAGGGAAAGTGATTCCGGTGACGGTGTTGACATACGGAGGACCGAGAGTTG 1108
Query 1138 GGAACAT-ACGATTCAAGGAGAGGATTGAGGAATTGGGAGTGAAGGTGTTGAGGGTGGTG 1196
||||| | | | || | ||||||||| ||||||||||||||||| ||| |||| || |||
Sbjct 1109 GGAACGTTAGGTTT-AGGGAGAGGATGGAGGAATTGGGAGTGAAAGTGATGAGAGTAGTG 1167
Query 1197 AACGAGCACGACGTCGTGGCTAAGTCGCCGGGACTGTTTCTGAACGAGCGT-GCACCACA 1255
|| | |||||||| || | |||||||||||| ||||| |||||||| || | ||| ||
Sbjct 1168 AATGTTCACGACGTGGTTCCCAAGTCGCCGGGATTGTTTTTGAACGAGAGTAG-ACCTCA 1226
Query 1256 GGCGCTAATGAA-ATTGGCGG-GAGGATTGCCGTGGTGCTATAGCCACGTGGGGGAA-AT 1312
||||| ||||| || | ||| | || ||||||||||| ||||||||||||||||| |
Sbjct 1227 CGCGCTGATGAAGATAG-CGGAGGGG-TTGCCGTGGTGTTATAGCCACGTGGGGGAGGA- 1283
Query 1313 GCTGCCGTTGGATCATCAGAAGTCGCCGTTCCTTAAGCCCACCGTTGATCTTTCAACTGC 1372
|||| |||||||||||||||| |||||||| ||||| || |||||||| |||| |||||
Sbjct 1284 GCTGGCGTTGGATCATCAGAACTCGCCGTTTCTTAAACCTTCCGTTGATGTTTCTACTGC 1343
Query 1373 TCATAA-CTTGGAAGCTCTCCTCCATCTCCTTGACGGGTATCATGGGAAAGG-GCAGAGA 1430
|||||| |||| ||||| | || ||| | ||||||||||||||||| ||||| | |||||
Sbjct 1344 TCATAATCTTG-AAGCTATGCTTCATTTACTTGACGGGTATCATGGAAAAGGAG-AGAGA 1401
Query 1431 TTTGTGTTATCAAGTGGGAGAGATCCA-GCGTTAGTGAACAAAGCATCTGATTTTTTGAA 1489
|||||| | || ||||||||||| ||| ||| ||||||||||||| || || ||||||||
Sbjct 1402 TTTGTGCTGTCGAGTGGGAGAGA-CCATGCGCTAGTGAACAAAGCGTCGGACTTTTTGAA 1460
Query 1490 AGACCATTT-CATGGTCCCTCCCTATTGGCGCCAAGACGCAAACAAAGGGATGGT-CAGG 1547
||| ||||| || ||| || | |||||| |||||||| || ||||| ||||| | ||
Sbjct 1461 AGAGCATTTACAAATTCCA-CCGTTTTGGCGTCAAGACGCGAATAAAGGAATGGTTC-GG 1518
Query 1548 AACACTGACGGCCGTTGGATTCAA-CCAGATCG-CATCCGTGCAGATGATCATCATGCTC 1605
|||| ||| || |||||||||||| || || || | ||||| || ||||||||| |||
Sbjct 1519 AACAGTGAAGGTCGTTGGATTCAAGCC-GAGCGTC-TCCGTTTTGAGGATCATCATTCTC 1576
Query 1606 CTGACATACATCAACTTCTCACCCAACTCC 1635
|||| || || || | |||| | || ||||
Sbjct 1577 CTGATATCCACCACCATCTCTCTCAGCTCC 1606
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82027690530
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5