BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470726 Length=1435 Score E Sequences producing significant alignments: (Bits) Value AT1G07030.1 | Symbols: | Mitochondrial substrate carrier famil... 2167 0.0 AT2G30160.1 | Symbols: | Mitochondrial substrate carrier famil... 673 0.0 > AT1G07030.1 | Symbols: | Mitochondrial substrate carrier family protein | chr1:2158420-2160809 REVERSE LENGTH=1477 Length=1477 Score = 2167 bits (1173), Expect = 0.0 Identities = 1367/1458 (94%), Gaps = 23/1458 (2%) Strand=Plus/Plus Query 1 TCCACCTGAAATAAAAATTGTGGAAGAAAGATCAAACCTTTGATGACAGCAAGGA-GA-- 57 |||||||||||||||||||||||||||||||||||| |||||| |||| |||||| || Sbjct 6 TCCACCTGAAATAAAAATTGTGGAAGAAAGATCAAATCTTTGACGACATCAAGGAGGAGG 65 Query 58 AGTTGGTAACCTAGAGATAAAAACAAAA-CTATGTTAGGAGATAATGTAGT-CA--ACCA 113 | ||||||| ||| |||||||||||||| ||||| || ||||||||||||| || |||| Sbjct 66 ATTTGGTAAGCTACAGATAAAAACAAAAGCTATGATATGAGATAATGTAGTCCACCACCA 125 Query 114 CATCAAATTCCCCCATCACCGTCTCTCTTCGTCGGTGATTAACATTCCGA-TT--TG-C- 168 || ||||||||||| ||||||||||||||||||||||||| ||||||||| || || | Sbjct 126 CACCAAATTCCCCCTTCACCGTCTCTCTTCGTCGGTGATTCACATTCCGATTTGGTGTCT 185 Query 169 ----T-C-C--ACCCATTCCTCAAAAACCCTACTTTTACTCAAGATTTTGTCCCCGCCGC 220 | | | | | | |||||||||||||||||||||||| |||||||||| ||||||| Sbjct 186 TTTTTACTCTTAACAAGTCCTCAAAAACCCTACTTTTACTCGAGATTTTGTCTCCGCCGC 245 Query 221 CGAGTGCCTAGTGCCTCCCGATCTACTCCCCAATCCCTAGATGGCTACGGAGGCTACAAC 280 ||||| || ||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 246 CGAGTACCAAGTGCCTCCCGATCTACGCCCCAATCCCTAAATGGCTACGGAGGCTACAAC 305 Query 281 CGTACCCAAATTCCAGGAACCTGATCTCCGGCAGGTTTCTCAGACACCGGATTTCAAACC 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 306 CGTACCCAAATTCCAGGAACCTGATCTCCGGCAGGTTTCTCAGACACCGGATTTCAAACC 365 Query 341 GGAAATCGCTCATGACGGTCTTAAGTTCTGGCAATTCATGATTGCTGGTTCGATTGCTGG 400 |||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 366 GGAAATCGCTCACGATGGTCTTAAGTTCTGGCAATTTATGATTGCTGGTTCGATTGCTGG 425 Query 401 CTCCGTCGAACACATGGCGATGTTTCCTGTTGATACCGTGAAGACCCATATGCAAGCACT 460 ||||||||||||||||||||||||||| || |||||| | ||||||||||||||||| || Sbjct 426 CTCCGTCGAACACATGGCGATGTTTCCCGTCGATACCATCAAGACCCATATGCAAGCGCT 485 Query 461 TCGACCATGTCCGTTAAAACCCGTCGGAATCCGGCAAGCTTTCCGTTCGATTATCCAAAA 520 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 486 TCGACCATGTCCCTTAAAACCCGTCGGAATCCGGGAAGCTTTCCGTTCGATTATCCAAAA 545 Query 521 GGAAGGACCTTCAGCTTTGTATCGAGGGATTTGGGCTATGGGTCTCGGAGCTGGACCTGC 580 |||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct 546 GGAAGGACCTTCAGCTCTGTATCGCGGGATCTGGGCTATGGGTCTCGGCGCTGGACCTGC 605 Query 581 TCACGCCGTTTACTTCTCCTTTTACGAGGTATCGAAGAAGTATTTATCCGCCGGGAATCA 640 |||||||||||||||||| || || || ||||||||||||||||||||||||||| |||| Sbjct 606 TCACGCCGTTTACTTCTCATTCTATGAAGTATCGAAGAAGTATTTATCCGCCGGGGATCA 665 Query 641 GAACAATTCCGTCGCGCATGCGGTCTCAGGTGTATTCGCTACTATATCAAGCGATGCTGT 700 |||||||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct 666 GAACAATTCCGTCGCGCATGCGATGTCCGGCGTATTCGCTACTATATCAAGCGATGCTGT 725 Query 701 TTTTACTCCCATGGATATGGTGAAGCAGAGGTTGCAGATGGGTGAAGGGACTTATAAAGG 760 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 726 TTTCACTCCCATGGATATGGTGAAGCAGAGGTTGCAGATGGGTGAAGGGACTTATAAAGG 785 Query 761 GGTTTGGGATTGTGTTAAGAGGGTTTTGCGTGAGGAAGGGATTGGTGCGTTTTATGCTTC 820 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 786 AGTCTGGGATTGTGTTAAGAGGGTTTTGCGTGAGGAAGGGATTGGTGCGTTTTATGCTTC 845 Query 821 TTATAGGACGACGGTTCTGATGAACGCGCCTTTTACGGCTGTTCATTTTGCGACGTATGA 880 |||||||||||||||||||||||||||||| |||||||||||||| ||||| || || || Sbjct 846 TTATAGGACGACGGTTCTGATGAACGCGCCGTTTACGGCTGTTCACTTTGCCACTTACGA 905 Query 881 GGCTGCTAAGAAGGGATTGATGGAGTTTTCGCCGGAAAGAGTTAGTGATGAGGAAGGTTG 940 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 906 GGCTGCTAAGAAGGGATTGATGGAGTTTTCGCCGGATAGAATTAGTGATGAGGAAGGTTG 965 Query 941 GTTGGTTCATGCCACTGCTGGAGCTGCTGCTGGTGGATTGGCAGCTGCTGTGACGACGCC 1000 ||||||||| || || |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 966 GTTGGTTCACGCTACCGCTGGAGCTGCTGCTGGTGGATTGGCAGCTGCTGTGACTACGCC 1025 Query 1001 GCTTGATGTTGTCAAGACGCAGTTGCAATGTCAGGGTGTGTGTGGATGCGACCGCTTCAC 1060 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1026 GCTTGATGTTGTCAAGACGCAGTTGCAATGTCAGGGTGTGTGTGGATGTGACCGCTTCAC 1085 Query 1061 TAGTGGTTCGATTAGTCATGTACTGAGAACGATAGTGAAAAAAGATGGATACAGAGGACT 1120 |||| |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1086 TAGTAGTTCTATTAGCCATGTACTTAGAACGATAGTGAAAAAAGATGGATACAGAGGACT 1145 Query 1121 TCTAAGGGGATGGCTCCCGAGAATGCTCTTCCATGCTCCTGCAGCAGCAATCTGTTGGTC 1180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1146 TCTAAGGGGATGGCTCCCGAGAATGCTCTTCCATGCTCCTGCAGCAGCAATCTGTTGGTC 1205 Query 1181 CACTTATGAAGGGGTTAAATCTTTCTTTCAAGACTTCAATGGCGATTCAAGCACTGCCTG 1240 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 1206 CACTTATGAAGGAGTTAAATCTTTCTTTCAAGACTTCAATGTCGATTCAAACACTGCCTG 1265 Query 1241 AAAAAA-GACAAATGG-TTAGGCTATT-CACACTCTTGAGGATCCTGCTTTTCTTATTTG 1297 |||||| |||||| || |||||||||| |||||||||||||||||||||||||||||||| Sbjct 1266 AAAAAAAGACAAAAGGGTTAGGCTATTTCACACTCTTGAGGATCCTGCTTTTCTTATTTG 1325 Query 1298 TTTGTAACATAGTTTTCTCAGGTTTTCTATGAAGTCATTTTTAGATTATATATTTTCCAG 1357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1326 TTTGTAACATAGTTTTCTCAGGTTTTCTATGAAGTCATTTTTAGATTATATATTTTCCAG 1385 Query 1358 GTTTGTGTTGATGATGCTGTCGTCGAGAAATTTTGATTAGAGTTGTACAAAACTATGTTC 1417 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1386 GTTTGTGTTGATGATAATGTCGTCGAGAAATTTTGATTAGAGTTGTACAAAACTATGTTC 1445 Query 1418 CTTCCAAATTTCTAATAA 1435 |||||||||||||||||| Sbjct 1446 CTTCCAAATTTCTAATAA 1463 > AT2G30160.1 | Symbols: | Mitochondrial substrate carrier family protein | chr2:12877838-12879649 FORWARD LENGTH=1446 Length=1446 Score = 673 bits (364), Expect = 0.0 Identities = 735/913 (81%), Gaps = 29/913 (3%) Strand=Plus/Plus Query 359 TCTTAAGTTCTGGCAATTCATGATTGCTGGTTCGATTGCTGGCTCCGTCGAACACATGGC 418 |||||| ||||||||| | ||| | || ||||| || |||||||| |||||||||||||| Sbjct 283 TCTTAAATTCTGGCAACTAATGGTCGCCGGTTCAATCGCTGGCTCAGTCGAACACATGGC 342 Query 419 GATGTTTCCTGTTGATACCGTGAAGACCCATATGCAAGCACTTCGACCATGTCCG-TTAA 477 |||||||| || ||||| || || |||||||||||||| ||||| |||||||| || | Sbjct 343 TATGTTTCCAGTAGATACAGTCAAAACCCATATGCAAGCTCTTCGTTCATGTCCGATT-A 401 Query 478 AACCCGTCGGAATCCGGCAAGCTTTCCGTTCGATTATCCAAAA-GGAAGGACCTTCAGCT 536 |||| |||||||||| |||||||||||||| ||||| ||||| || |||||||| ||| Sbjct 402 AACCAATCGGAATCCGTCAAGCTTTCCGTTCAATTAT-CAAAACCGATGGACCTTCTGCT 460 Query 537 TTGTATCGAGGGATTTGGGCTATGGGTCTCGGAGCTGGACCTGCTCACGCCGTTTACTTC 596 || ||| |||| |||||||||||||| || || |||||||| |||||||| ||||| ||| Sbjct 461 TTATATAGAGGTATTTGGGCTATGGGACTTGGTGCTGGACCAGCTCACGCTGTTTATTTC 520 Query 597 TCCTTTTACGAGGTATCGAAGAAGTATTTATCCGCCGGGAATCAGAACAATTCCGTC-GC 655 || || || || || || ||||||| |||||||| || || | || || || | | || Sbjct 521 TCATTCTATGAAGTCTCTAAGAAGTTTTTATCCGGTGGAAACCCTAATAACTCTG-CTGC 579 Query 656 GCATGCGGTCTCAGGTGTATTCGCTACTATATCAAGCGATGCTGTTTTTACTCCCATGGA 715 || || | || ||||| |||||||||||||| || |||||||| |||||||| ||||| Sbjct 580 ACACGCTATTTCCGGTGTTTTCGCTACTATATCTAGTGATGCTGTGTTTACTCCAATGGA 639 Query 716 TATGGTGAAGCAGAGGTTGCAGATGGGTGAA-GGGACTTATAAAGGGGTTTGGGATTGTG 774 |||||| ||||| |||||||| || || ||| || ||||||||||| |||||||||||| Sbjct 640 TATGGTTAAGCAAAGGTTGCAAATTGG-GAATGGAACTTATAAAGGAGTTTGGGATTGTA 698 Query 775 TTAAGAGGGTTTTGCGTGAGGAAGGGATTGGTGCGTTTTATGCTTCTTATAGGACGACGG 834 | ||||| || ||||||||||||| ||||||| ||||| ||||| ||||| || || | Sbjct 699 TCAAGAGAGTAACGCGTGAGGAAGGGTTTGGTGCTTTTTACGCTTCGTATAGAACTACTG 758 Query 835 T-TCTGATGAACGCGCCTTTTACGGCTGTTCATTTTGCGACGTATGAGGCTGCTAAGAAG 893 | | ||||||| || || ||||| ||||| ||||| | || |||||||| | |||| || Sbjct 759 TGT-TGATGAATGCTCCGTTTACCGCTGTGCATTTCACTACTTATGAGGCGGTTAAG-AG 816 Query 894 -GGATTGATGGAG-TTTTCGCC-G-GAAAG-AGTT-----AG-TGATGAGGAAGGTTGGT 942 || |||| |||| | || ||| | | | | ||| || |||||||||||||||| Sbjct 817 AGGTTTGAGGGAGATGTT-GCCTGAGCATGCTGTTGGAGCAGAGGATGAGGAAGGTTGGT 875 Query 943 TGGTTCATGCCACTGCTGGAGCTGCTGCTGGTGGATTGGCAGCTGCTGTGACGACGCCGC 1002 || || |||| |||||||||||||| |||||||| || || |||||||| || || |||| Sbjct 876 TGATTTATGCTACTGCTGGAGCTGCGGCTGGTGGGTTAGCGGCTGCTGTAACTACTCCGC 935 Query 1003 TTGATGTTGTCAAGACGCAGTTGCAATGTCAGGGTGTGTGTGGATGCGACCGCTTCACTA 1062 |||||||||| |||||||||||||||||||||||||||||||| || ||||| |||| | Sbjct 936 TTGATGTTGTTAAGACGCAGTTGCAATGTCAGGGTGTGTGTGGTTGTGACCGTTTCAAGA 995 Query 1063 GTGGTTCGATTAGTC-ATGTACTGAGAACGATAGTGAAAAAAGATGGATACAGAGGACTT 1121 | |||| || || | |||| | | || |||||||| ||||| || || ||||||||| Sbjct 996 GCAGTTCAATAAG-CGATGTGTTCCGTACAATAGTGAAGAAAGACGGTTATAGAGGACTT 1054 Query 1122 -CTAAGGGGATGGCTCCCGAGAATGCTCTTCCATGCTCCTGCAGCAGCAATCTGTTGGTC 1180 ||| | |||||||| || |||||||||||||||||||| ||||| || || || ||||| Sbjct 1055 GCTA-GAGGATGGCTACCAAGAATGCTCTTCCATGCTCCAGCAGCTGCGATTTGCTGGTC 1113 Query 1181 CACTTATGAAGGGGTTAAATCTTTCTTTCAAGA-CTTCAATGGCGATTCAAGCACTGCCT 1239 |||||||||| || ||||||||||||||||| || |||||| || ||| | | || | Sbjct 1114 CACTTATGAAACAGTCAAATCTTTCTTTCAAGATCT-CAATGGTGAAGCAAACGCAGCTT 1172 Query 1240 GAAAAAAGACAAA 1252 ||||| | ||||| Sbjct 1173 GAAAAGACACAAA 1185 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70732567905 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5