BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470732
Length=2385
Score E
Sequences producing significant alignments: (Bits) Value
AT1G07110.1 | Symbols: F2KP, ATF2KP, FKFBP | fructose-2,6-bisph... 3849 0.0
AT3G30200.1 | Symbols: | Plant transposase (Ptta/En/Spm family... 483 4e-135
AT1G40089.1 | Symbols: | pseudogene, putative fructose-2,6-bis... 451 1e-125
> AT1G07110.1 | Symbols: F2KP, ATF2KP, FKFBP | fructose-2,6-bisphosphatase
| chr1:2178104-2184148 REVERSE LENGTH=2662
Length=2662
Score = 3849 bits (2084), Expect = 0.0
Identities = 2232/2303 (97%), Gaps = 12/2303 (1%)
Strand=Plus/Plus
Query 89 GGGTTTCGATGGGGTCGGGTGCATCGAAGGATACTGAGGAAGATGACGATGGTTCCAATG 148
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 161 GGGTTTCGATGGGGTCAGGTGCATCGAAGAATACTGAGGAAGATGACGATGGTTCCAATG 220
Query 149 GCGGAGGTGGTCAGCTCTACGTTTCACTCAAAATGGAGAACTCTAAGGTTGAAGGCGAGC 208
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 221 GCGGAGGTGGTCAGCTCTACGTTTCACTCAAAATGGAAAACTCTAAGGTTGAAGGAGAGC 280
Query 209 TCACTCCTCACGTCTATGGCTCTCTTCCTCTCATCGGTTCCTGGGATCCTTCCAAAGCTC 268
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 281 TCACTCCTCATGTCTATGGCTCTCTTCCTCTCATCGGTTCCTGGGATCCTTCCAAAGCTC 340
Query 269 TTCCGATGCAACGTGAATCGGCGTCAATGTCGGAAATAAGCTTCGTTGTTCCTCCTGATC 328
||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct 341 TTCCGATGCAACGTGAATCTGCGTTAATGTCGGAGCTAAGCTTCGTTGTTCCTCCTGATC 400
Query 329 ACGAGACTTTGGATTTCAAGTTTTTGTTGAAGCCAAAGCACAGAAATACGCCTTGCATAG 388
||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 401 ACGAGACTTTGGACTTCAAGTTTTTGTTGAAGCCAAAGAACAGAAATACGCCCTGCATAG 460
Query 389 TGGAGGAGGGTCAAAATAGGCTTCTTACTGGTGGTTCGTTGCAAGGAGATGCTAGATTAG 448
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 TGGAGGAGGGTGAAAATAGGCTTCTTACTGGTGGTTCGTTGCAAGGAGATGCTAGATTAG 520
Query 449 CTCTGTTTAGGCTGGAAGGTGATGTAATTGTTGAATTCCGAGTCTTCATCAACGCCGACA 508
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 521 CTCTGTTTAGGCTGGAAGGTGATGTGATTGTTGAATTCCGAGTCTTCATCAACGCTGACA 580
Query 509 GAGTTTCTCCATTTGATCTTGCTACTAGTTGGAGAGCTTATAGGGAGAACCTCCAGCCTT 568
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 581 GAGTTTCTCCAATTGATCTTGCTACTAGTTGGAGAGCTTATAGGGAGAACCTCCAGCCTT 640
Query 569 CTACTGTACGTGGAATTCCTGATGTCAGCATTAATCCTGATCCCAAAA-CTGTTGAGTGT 627
||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||
Sbjct 641 CTACTGTACGTGGAATTCCTGATGTCAGCATTAATCCTGAT-CCAAAATCTGCTGAGTGT 699
Query 628 CCTTTAGAAAGTTTGGAGCTCGATCTTGCGCATTATGAAGTTCCTGCTCCTGCACCTTCT 687
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 700 CCTTTAGAAAGTTTGGAGCTCGATCTTGCACATTATGAAGTTCCTGCTCCTGCGCCTTCT 759
Query 688 GCAAACTCGTACCTTGTTTATGCGGCGGACAATGCAGAGAATCCACGATCTCTTTCAGCT 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 760 GCAAACTCGTACCTTGTTTATGCGGCGGACAATGCAGAGAATCCACGATCTCTTTCAGCT 819
Query 748 TCTGGTTCATTTCGTAATGACAGTACTACAAACTCAGCACAGA-ATAATTCTGAAGATTC 806
||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||
Sbjct 820 TCTGGTTCATTTCGTAATGACAGTACTCCAAAAGCAGCACAGAGA-AATTCTGAAGATTC 878
Query 807 TGGTGTTACGG-T--TGGATCTCCACT-TGCAAAGGAAATGAAGATCATTGTTCCCGATT 862
||||||||||| | |||||| ||| | |||||||||||||| |||| ||||||| ||||
Sbjct 879 TGGTGTTACGGTTGATGGATCCCCA-TCTGCAAAGGAAATGACGATCGTTGTTCCTGATT 937
Query 863 CCTCGAATATCTATTCGGCTTCAGGAGAGGCTGAGTCAAAGTCAGTGGAAACACTCTCAC 922
||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct 938 CCTCGAATATCTATTCGGCTTTTGGAGAGGCTGAGTCAAAGTCTGTGGAGACACTCTCAC 997
Query 923 CGTTTCAGCAGAAAGATGGTCAAAAGGGACTCTTTGTTGATCGTGGTGTTGGCTCCCCTA 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 CGTTTCAGCAGAAAGATGGTCAAAAGGGACTCTTTGTTGATCGTGGTGTTGGCTCCCCTA 1057
Query 983 GGCTAGTCAAGTCTATTAGTGCAAGCTCTTTTTTGGTTGATACTAAGCAAACCAAGAATT 1042
||||||| |||||| |||||||||||||||||||| ||||||| ||||||| ||||||||
Sbjct 1058 GGCTAGTGAAGTCTCTTAGTGCAAGCTCTTTTTTGATTGATACCAAGCAAATCAAGAATT 1117
Query 1043 CAATGCCAGCCGCTGCAGGAGCTGTTGCCGCAGCAGCGGTAGCTGATCAAATGCTTGGAC 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 CAATGCCAGCCGCTGCAGGAGCTGTTGCCGCAGCAGCGGTAGCTGATCAAATGCTTGGAC 1177
Query 1103 CGAAAGAAGATAGACATCTAGCAATTGTCCTGGTTGGCTTGCCAGCTCGAGGAAAGACTT 1162
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1178 CGAAAGAAGATAGACATCTAGCAATTGTCCTGGTTGGCTTGCCTGCTCGAGGAAAGACTT 1237
Query 1163 TTACTGCAGCAAAGTTGACAAGATATCTACGCTGGTTGGGACATGATACAAAACATTTTA 1222
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1238 TTACTGCAGCAAAGTTGACAAGATATCTACGCTGGTTGGGACATGATACTAAACATTTTA 1297
Query 1223 ATGTTGGAAAGTACCGACGGCTTAAACATGGAGTTAACATGAGTGCTGATTTCTTCCGAG 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 ATGTTGGAAAGTACCGACGGCTTAAACATGGAGTTAACATGAGTGCTGATTTCTTCCGAG 1357
Query 1283 CTGACAATCCTGAAGGTGTAGAGGCACGGACTGAGGTAGCAGCACTTGCAATGGAGGACA 1342
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1358 CTGATAATCCTGAAGGTGTAGAGGCACGGACTGAGGTAGCAGCACTTGCTATGGAGGACA 1417
Query 1343 TGATAGCTTGGATGCAAGAAGGTGGTCAAGTTGGAATCTTTGATGCAACTAATAGTACAC 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1418 TGATAGCTTGGATGCAAGAAGGTGGTCAAGTTGGAATCTTTGATGCAACTAATAGCACAC 1477
Query 1403 GAGTTCGACGGAATATGTTGATGAAAATGGCTGAAGGAAAGTGTAAGATCATTTTTCTAG 1462
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1478 GAGTTCGACGGAATATGTTGATGAAAATGGCTGAAGGAAAGTGTAAGATCATTTTTCTGG 1537
Query 1463 AAACACTATGCAATGATGAGCGCATTATTGAAAGAAACATACGTCTTAAAATCCAGCAAA 1522
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1538 AAACACTATGCAATGATGAGCGCATTATTGAAAGAAACATACGTCTAAAAATCCAGCAAA 1597
Query 1523 GTCCTGACTATTCAGAAGAAATGGATTTTGAAGCTGGAGTACGAGACTTTAGAGACCGTT 1582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1598 GTCCTGACTATTCAGAAGAAATGGATTTTGAAGCTGGAGTACGAGACTTTAGAGACCGTT 1657
Query 1583 TAGCCAATTATGAAAAGGTTTATGAGCCTGTAGAAGAAGGTTCTTACATCAAAATGATTG 1642
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1658 TAGCCAATTATGAAAAGGTTTATGAGCCTGTAGAAGAAGGTTCGTACATCAAAATGATTG 1717
Query 1643 ATATGGTCAGCGGGAACGGTGGACAGATACAAGTGAACAATATTAGTGGTTACCTTCCTG 1702
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1718 ATATGGTCAGTGGGAACGGTGGACAGATACAAGTGAACAATATTAGTGGTTACCTTCCTG 1777
Query 1703 GGAGAATTGTGTTTTTCTTGGTGAATACGCATCTCACCCCACGACCAATACTACTCACTC 1762
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1778 GGAGAATTGTATTTTTCTTGGTGAATACGCATCTCACCCCACGACCAATACTACTCACTC 1837
Query 1763 GGCATGGAGAAAGCATGGACAATGTTAGAGGCAGAATTGGAGGAGATAGCATTATAAGTG 1822
||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||
Sbjct 1838 GGCATGGAGAAAGCATGGATAATGTTAGAGGCAGAATTGGAGGAGATAGCGTAATAAGTG 1897
Query 1823 AATCTGGGAAACTTTACGCAAAGAAACTTGCCAGCTTTGTTGAAAAGCGACTTAAATCTG 1882
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1898 ACTCTGGTAAACTTTACGCAAAGAAACTTGCCAGCTTTGTTGAAAAGCGACTTAAATCTG 1957
Query 1883 AAAAGGCTGCTTCGATTTGGACCAGTACACTTCAGAGAACAAACTTAACAGCAAGTTCCA 1942
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1958 AAAAAGCTGCTTCGATTTGGACCAGTACACTTCAGAGAACAAACCTAACAGCAAGTTCCA 2017
Query 1943 TTGTCGGATTCCCCAAGGTGCAATGGCGTGCCCTGGACGAGATCAATGCTGGAGTTTGTG 2002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2018 TTGTCGGATTCCCCAAGGTGCAATGGCGTGCCCTGGACGAGATCAATGCTGGAGTTTGTG 2077
Query 2003 ATGGGATGACATATGAAGAGGTAAAGAAGAACATGCCAGAAGAGTATGAATCTCGGAAAA 2062
||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct 2078 ATGGGATGACATATGAAGAGGTAAAGAAGAACATGCCAGAAGAATACGAATCTCGAAAAA 2137
Query 2063 AGGACAAATTACGATACCGATACCCTCGTGGAGAGTCCTACCTTGATGTAATTCAACGGC 2122
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2138 AGGACAAATTACGATACCGATACCCTCGTGGAGAGTCCTACCTTGATGTAATCCAACGGC 2197
Query 2123 TTGAACCTGTGATTATTGAGTTAGAACGACAAAGAGCTCCTGTCGTCGTGATATCTCACC 2182
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2198 TTGAACCTGTGATCATTGAGTTAGAACGACAAAGAGCTCCTGTCGTCGTGATATCTCACC 2257
Query 2183 AGGCTGTTCTGAGAGCCTTGTATGCATATTTTGCGGATCGTCCTCTCAAAGAAATACCCC 2242
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2258 AGGCTGTTCTGAGAGCCTTGTATGCATATTTTGCGGATCGTCCCCTCAAAGAAATACCCC 2317
Query 2243 AAATCGAGATGCCACTTCACACTATAATAGAGATACAGATGGGAGTTTCTGGTGTGCAAG 2302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2318 AAATCGAGATGCCACTTCACACTATAATAGAGATACAGATGGGAGTTTCTGGTGTGCAAG 2377
Query 2303 AGAAACGCTACAAACTCATGGACTGAATTCAAACAACAACTATTACCACAGATTCTCAAC 2362
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 2378 AGAAACGCTACAAACTCATGGACTGAATTCAAACAAC---TATTACCACAAATTCTCAAC 2434
Query 2363 AAACTCTCGTCCTAAAGGTTTTT 2385
|||||||||||||||||||||||
Sbjct 2435 AAACTCTCGTCCTAAAGGTTTTT 2457
Score = 110 bits (59), Expect = 9e-23
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 1 AGaaaaaaaaaaGCTGCGGAGCAAGCGGCTTCGCTTCTTCTCTTTCTCTCAAATCTCTTA 60
||| |||||||||||||||||| |||| |||||||||| |||||||||||||||||||||
Sbjct 15 AGACAAAAAAAAGCTGCGGAGCTAGCGACTTCGCTTCT-CTCTTTCTCTCAAATCTCTTA 73
Query 61 TCCGTTTGATTT 72
||||||||||||
Sbjct 74 TCCGTTTGATTT 85
> AT3G30200.1 | Symbols: | Plant transposase (Ptta/En/Spm family)
| chr3:11827752-11834262 REVERSE LENGTH=1533
Length=1533
Score = 483 bits (261), Expect = 4e-135
Identities = 315/339 (93%), Gaps = 12/339 (4%)
Strand=Plus/Plus
Query 506 ACAGAGTTTCTCCATTTGATCTTGCTACTAGTTGGAGAGCTTATAGGGAGAACCTCCAGC 565
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 143 ACACAGTTTCTCCAATTGATCTTGCTACTAGTTGGAGAGCTTATAGGGAGAACCTCCAGC 202
Query 566 CTTCTACTGTACGTGGAATTCCTGATGTCAGCATTAATCCTGATCCCAAAA-CTGTTGAG 624
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 203 CTTCTACTGTACGTGGAATTCCTGATGTCAGCATTAATCCTGATCC-AAAATCTGTTGAG 261
Query 625 TGTCCTTTAGAAAGTTTGGAGCTCGATCTTGCGCATTATGAAGTTCCTGCTCCTGCACCT 684
||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||
Sbjct 262 TGTCCTTTAGAAAGTTTGGAGCTTGATCTTGCACATTATGAAGTTCCTGCTCCTACGCCT 321
Query 685 TCTGCAAACTCGTACCTTGTTTATGCGGCGGACAATGCAGAGAATCCACGATCTCTTTCA 744
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 322 TCTGCAAACTCGTACCTTGTTTATGCGGCGGATAATGCAGAGAATCCACGATCTCTTTCA 381
Query 745 GCTTCTGGTTCATTTCGTAATGACAGTACTACAAACTCAGCACAGA-ATAATTCTGAAGA 803
||||||||||||||| |||||||||||| |||| ||||||||| | |||||||||||
Sbjct 382 GCTTCTGGTTCATTT---AATGACAGTACTCCAAAAGCAGCACAGAGA-AATTCTGAAGA 437
Query 804 TTCTGGTGTTACGGTTG--G-ATCTCCA-CTTGCAAAGG 838
||| ||||||||||||| | ||| ||| || |||||||
Sbjct 438 TTCCGGTGTTACGGTTGATGGATCACCATCT-GCAAAGG 475
> AT1G40089.1 | Symbols: | pseudogene, putative fructose-2,6-bisphosphatase,
similar to fructose-2,6-bisphosphatase GI:13096098
from (Arabidopsis thaliana); blastp match of 75% identity
and 5.7e-42 P-value to GP|14149116|dbj|BAB55655.1||AB061797
fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase
{Bruguiera gymnorrhiza} | chr1:15003026-15004333 REVERSE LENGTH=1308
Length=1308
Score = 451 bits (244), Expect = 1e-125
Identities = 285/304 (94%), Gaps = 5/304 (2%)
Strand=Plus/Plus
Query 331 GAGACTTTGGATTTCAAGTTTTTGTTGAAGCCAAAGCACAGAAATACGCCTTGCATAGTG 390
|||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||
Sbjct 583 GAGACTTTGGATTTCAAGTTTTTGTTGAAGCCAAAGAACAGAAATACTCCCTGCATAGTG 642
Query 391 GAGGAGGGTCAAAATAGGCTTCTTACTGGTGGTTCGTTGCAAGGAGATGCTAGATTAGCT 450
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 643 GAGGAGGGTGAAAATAGGCTTCTTACTGGTGGTTTGTTGCAAGGAGATGCTAGATTAGCT 702
Query 451 CTGTTTAGGCTGGAAGGTGATGTAATTGT-TGAATTCCGAGTCTTCATCAACGCCGACAG 509
||||||||| ||||||||||||| ||| | ||||| | ||||||||||||||||||||
Sbjct 703 CTGTTTAGGTTGGAAGGTGATGTGATT-TAAGAATTTTGTGTCTTCATCAACGCCGACAG 761
Query 510 AGTTTCTCCATTTGATCTTGCTACTAGTTGGAGAGCTTATAGGGAGAACCTCCAGCCTTC 569
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 762 AGTTTCTCCAATTGATCTTGCTACTAGTTGGAGAGCTTATAGGGAGAACCTCCAGCCTTC 821
Query 570 TACTGTACGTGGAATTCCTGATGTCAGCATTAATCCTGATCCCAAA-ACTGTTGAGTGTC 628
|||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| ||
Sbjct 822 TACTGTACGTGGAATTCCTGATGTCAGCATTAATCCTGATCCAAAATA-TGTTGAG-GTA 879
Query 629 CTTT 632
||||
Sbjct 880 CTTT 883
Score = 272 bits (147), Expect = 1e-71
Identities = 198/221 (90%), Gaps = 10/221 (5%)
Strand=Plus/Plus
Query 623 AGTGTCCTTTAGAAAGTTTGGAGCTCGATCTTGCGCATTATGAAGTTCCTGCTCCTGCAC 682
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | |
Sbjct 1072 AGTGTCCTTTAGAAAGTTTGGAGCTTGATCTTGCACATTATGAAGTTCCTGCTCCTACGC 1131
Query 683 CTTCTGCAAACTCGTACCTTGTTTATGCGGCGGACAATGCAGAGAATCCACGATCTCTTT 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 CTTCTGCAAACTCGTACCTTGTTTATGCGGCGGACAATGCAGAGAATCCACGATCTCTTT 1191
Query 743 CAGCTTCTGGTTCATTTCGTAATGACAGTACTACAAACTCAGCACAGA-ATAATTCTGAA 801
||||||||||||| ||| |||||||||||| |||| ||||||||| | ||| |||||
Sbjct 1192 CAGCTTCTGGTTCGTTT---AATGACAGTACTCCAAAAGCAGCACAGAGA-AATACTGAA 1247
Query 802 GATTCTGGTGTTACGGTTG--G-ATCTCCA-CTTGCAAAGG 838
||||| |||| ||||||| | ||| ||| || |||||||
Sbjct 1248 GATTCCAGTGTAACGGTTGATGGATCACCATCT-GCAAAGG 1287
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118423085655
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5