BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470920 Length=1372 Score E Sequences producing significant alignments: (Bits) Value AT1G08570.1 | Symbols: ACHT4 | atypical CYS HIS rich thioredox... 2017 0.0 > AT1G08570.1 | Symbols: ACHT4 | atypical CYS HIS rich thioredoxin 4 | chr1:2712892-2714734 FORWARD LENGTH=1417 Length=1417 Score = 2017 bits (1092), Expect = 0.0 Identities = 1265/1345 (94%), Gaps = 25/1345 (2%) Strand=Plus/Plus Query 17 GAAAACGAAACTTCGCTGGCGACTAAAGATTGCTGAGAAGACACGTCGTCTCTGTGAGAA 76 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42 GAAAGCGAAACTTCGCTGGCGACTAAAGATTGCTGAGAAGACACGTCGTCTCTGTGAGAA 101 Query 77 C-TTTTCTTTTTCTTCTGGTAAATTCTGGAGAGAGAGATATTGTATTTTTCTTC-G-TTC 133 | ||||||||||||||||||| ||||| | |||| ||||||||| ||||||||| | || Sbjct 102 CTTTTTCTTTTTCTTCTGGTATATTCT-G-GAGACAGATATTGT-TTTTTCTTCTGATT- 157 Query 134 GGAGAAT--TATGGCGGAAGTGATTAGCAAAACGAGTTTGTTCACCGGAGCTTGTGGGAA 191 |||||| |||| ||||||||||||||||||||||||||||| ||||||||| || Sbjct 158 AGAGAATAATATGACGGAAGTGATTAGCAAAACGAGTTTGTTCTTAGGAGCTTGT-GG-- 214 Query 192 TCATCATCACCGTGTTGATGATTTCTCTTTGTCCCCGGTGAGTTTTGGTGGGTTTGGTCT 251 | |||||||||||||||||||||||||||| || |||||||||||||||||||||||| | Sbjct 215 TAATCATCACCGTGTTGATGATTTCTCTTTCTCTCCGGTGAGTTTTGGTGGGTTTGGTTT 274 Query 252 GAAAAAGAGTTTCTCTTGTCAGAAGCTGAAGAATCAAAAGCCTCTTACAAGTGAATTCCA 311 |||||||||||||||||||| |||||| |||| ||| |||||||||| ||||| ||| | Sbjct 275 GAAAAAGAGTTTCTCTTGTCTGAAGCTTAAGAGTCAGAAGCCTCTTAGAAGTGTATTTTA 334 Query 312 TGGAAAACAGATCGTTTTCGGTGATGCTCAAGACGAGAGCTTCAGAAGGAGC-TTATG-T 369 |||||||||||||||||||| ||| ||||||||||||||||||||| || | | | | | Sbjct 335 CGGAAAACAGATCGTTTTCGGAGATTCTCAAGACGAGAGCTTCAGAA-GATCATCA-GCT 392 Query 370 GT-AAATTTGCAGACAACTTTGAGGATTGGAACAGCTCAGAAGTGGTGGGAGAAAGGTCT 428 | | | | |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 393 ATCACAGCT-CAGACAACTTTGAGGATTGGGACAGCTCAGAAGTGGTGGGAGAAAGGTCT 451 Query 429 GAAAGAAAACATGAGAGAGATCTCTTCAGCTCAAGAACTCGTTGACTCTCTCACTAACGC 488 |||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct 452 GAAAGATAACATGAGAGAGATCTCTTCAGCTCAAGAGCTCGTTGATTCTCTTACTAACGC 511 Query 489 TGGTGATAAGCTTGTTGTTGTTGATTTCTTCTCACCTGGCTGTGGCGGCTGCAAGGCTCT 548 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 512 TGGTGATAAGCTTGTTGTTGTTGATTTCTTCTCACCTGGCTGTGGTGGCTGCAAGGCTCT 571 Query 549 TCATCCTAAGATATGTCAGTTGGCAGAGATGAACCCTGATGTGCAGTTTCTTCAGGTGAA 608 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 572 CCATCCTAAGATATGTCAGTTTGCAGAGATGAACCCGGATGTGCAGTTTCTTCAGGTGAA 631 Query 609 TTACGAGGAGCATAAGTCCATGTGTTATAGCCTCGGTGTCCATGTTCTCCCTTTTTTCCG 668 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 632 TTACGAGGAGCATAAGTCCATGTGTTATAGTCTTGGTGTCCATGTTCTCCCTTTTTTCCG 691 Query 669 ATTCTACCGAGGCTCTCAGGGTCGTGTTTGCAGCTTTAGCTGTACCAATGCCACGATCAA 728 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 692 ATTCTACCGTGGCTCTCAGGGTCGTGTTTGCAGCTTTAGCTGTACCAATGCCACGATCAA 751 Query 729 GAAATTCAGAGATGCATTGGCAAAGCATGGTCCAGATAGGTGCAGCCTTGGACCGACTAA 788 ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct 752 GAAATTCAGAGATGCCTTGGCAAAGCATGGTCCAGATAGGTGCAGCCTCGGACCGACCAA 811 Query 789 AGGCCTTGAAGAGAAAGAGCTTGTGGCACTTGCAGCCAACAAAGAACTCAACTTTACTTA 848 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 812 AGGCCTTGAAGAGAAAGAGCTTGTGGCACTTGCAGCCAACAAAGAACTCAACTTTACTTA 871 Query 849 CACACCAAAGCCTGTACCGGTTGAGAAAGAAGCAGCCACTCCTAAATCAAACCCAAGTCT 908 |||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| Sbjct 872 CACACCAAAGCCTGTACCAGTTGAGAAAGAAGCAGCCACTCCTGATTCAAACCCAAGTCT 931 Query 909 CCCTGTTCCTCTTCCTTCGATGAGCGCCAATGACGAAAAAACATTGGTCTCCGCAGGGAG 968 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 932 CCCTGTTCCTCTTCCTTCGATGAGCTCCAATGACGAAAAAACATTGGTCTCCGCAGGGAG 991 Query 969 ATGAGA-TCGAATAAACATTTCCCTGTACAGTTTGCGTGATAGTAGTAGTAGTAGCAGCA 1027 |||||| | ||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 992 ATGAGACT-GAATAAACATTTCCCTGTATAGTTTGCGTGATAGTAGTAGTAG---CAGCA 1047 Query 1028 GCTGGATATATTGCAGTACCTAAAGATGTCAGTTCTCGGAGCAGCCAGCCGGTTTAGTGG 1087 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1048 GCTGGATATATTGCAGTACCTAAAGATGTCAGTTCTCGGAGCAGCCAGCCGGTTTAGTGG 1107 Query 1088 GGTTTAGtttttttttGGGTCCCCTGAGCAAAATCGGTTCTTGGCATCTGGGTTTACCTA 1147 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1108 GGTTTAGTTTTTTTTCGGGTCCCCTGAGCAAAATCGGTTCTTGGCCTCTGGGTTTACCTA 1167 Query 1148 GAGCAAAACCAGTTCCGATGGTTACTTGAGTTTTGCTCAGTTCTTATGGGATTGAGAGTG 1207 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1168 GAGCAAAACCAGTTCCGATGGTTACTTGAGTTTTGCTCAGTTCTTATGGGATTG-GAGTG 1226 Query 1208 GAAGGTCGTGCGCTCGGCGGCATGGAAGCTTTCTCCTCTCAATCAGCTTCGGTAGAgttt 1267 |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||| Sbjct 1227 GAAGGTCGTGCGCTCGGCAGCATGGAAGCTTTCTCCTTTCAATCAGCTTCAGTAGAGTTT 1286 Query 1268 tggtttctttgtttgttttt-atttgctttaagattttAATGTAAATAAAAATCCAATGA 1326 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 1287 TGGTTTCTTTGTTTGTTTTTTATTTGCTTTAAGAATTTAATGTAAATAAAAATCCAATGA 1346 Query 1327 GGATTATCATACAATGTCATGAAGG 1351 ||||||||||||||||||||||||| Sbjct 1347 GGATTATCATACAATGTCATGAAGG 1371 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67569933570 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5