BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471006 Length=659 Score E Sequences producing significant alignments: (Bits) Value AT1G09180.1 | Symbols: ATSAR1, ATSARA1A, SARA1A | secretion-ass... 928 0.0 AT1G56330.1 | Symbols: SAR1, ATSAR1, ATSARA1B, ATSAR1B, SAR1B |... 665 0.0 > AT1G09180.1 | Symbols: ATSAR1, ATSARA1A, SARA1A | secretion-associated RAS super family 1 | chr1:2965023-2965972 FORWARD LENGTH=737 Length=737 Score = 928 bits (502), Expect = 0.0 Identities = 583/622 (94%), Gaps = 6/622 (1%) Strand=Plus/Plus Query 41 TGTGTGGATTCTAATTAGATCTGAGGAAGACGACGTCATGTTTTTGTTTGATTGGTTCTA 100 |||||||||| |||| ||| | ||||||| |||||||||||||| || ||||||||||| Sbjct 88 TGTGTGGATTATAATCCGATATCAGGAAGAAGACGTCATGTTTTTATTCGATTGGTTCTA 147 Query 101 TGGAATATTTGCGTCGTTAGGTTTGTGGC-AGAAAGAAGCGAAGATCTTGTTTCTAGGCC 159 |||||| || || |||||||| |||| || | ||||| ||||| ||||||||| |||||| Sbjct 148 TGGAATCTTGGCCTCGTTAGGGTTGT-GCAAAAAAGAGGCGAAAATCTTGTTTTTAGGCC 206 Query 160 TCGACAATGCCGGAAAAACTACTTTACTTCACATGCTCAAAGACGAGAGATTAGTTCAGC 219 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 207 TCGACAATGCCGGAAAAACTACTTTGCTTCACATGCTCAAAGATGAGAGATTAGTTCAGC 266 Query 220 ACCAGCCAACACAGCATCCCACGTCTGAGGAACTTAGCATTGGCAAAATCAAGTTCAAGG 279 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 267 ACCAGCCAACACAGCATCCCACGTCTGAGGAACTTAGCATTGGCAAAATCAACTTCAAGG 326 Query 280 CCTTTGATTTGGGTGGCCATCAGATTGCTCGTCGGGTTTGGAAAGATTACTATGCCAAGG 339 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 327 CCTTTGATTTGGGTGGCCATCAGATTGCTCGTAGGGTTTGGAAAGACTGCTATGCCAAGG 386 Query 340 TTGATGCTGTTGTCTACCTTGTGGATGCTTACGACAGGGAGAGATTTGTGGAGTCGAAAA 399 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 387 TTGATGCTGTTGTCTACCTAGTGGATGCTTACGACAGGGATAGATTTGTGGAGTCGAAAA 446 Query 400 GAGAGCTAGACGCTCTTTTATCAGATGAAGCCTTAGCAAATGTTCCCTGTCTTATTCTTG 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447 GAGAGCTAGACGCTCTTTTATCAGATGAAGCCTTAGCAAATGTTCCCTGTCTTATTCTTG 506 Query 460 GCAACAAGATTGATATTCCTTATGCATCCTCAGAAGATGAGCTCAGGTATCACTTGGGTC 519 |||||||||||||||| |||||||||||||||||||||||||| |||||| |||| |||| Sbjct 507 GCAACAAGATTGATATACCTTATGCATCCTCAGAAGATGAGCTTAGGTATTACTTAGGTC 566 Query 520 TCACCAATTTCACTACCGGTAAAGGCA-ATGTCAGTCTTGAAAACTCTGGTGTTCGTCCC 578 ||||||||||||||||||||||||||| | || | ||||||| ||||||||||||||||| Sbjct 567 TCACCAATTTCACTACCGGTAAAGGCATA-GTGAATCTTGAAGACTCTGGTGTTCGTCCC 625 Query 579 CTTGAGGTCTTCATGTGCAGCATCGTCCGCAAAATGGGTTATGGTGAAGGGTTC-AAATG 637 |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct 626 CTTGAGGTCTTCATGTGCAGCATCGTCCGCAAAATGGGTTATGGCGA-GGGTTTTAAATG 684 Query 638 GCTATCTCAGTATATCAAGTAG 659 |||||||||||||||||||||| Sbjct 685 GCTATCTCAGTATATCAAGTAG 706 > AT1G56330.1 | Symbols: SAR1, ATSAR1, ATSARA1B, ATSAR1B, SAR1B | secretion-associated RAS 1B | chr1:21086555-21088549 REVERSE LENGTH=943 Length=943 Score = 665 bits (360), Expect = 0.0 Identities = 511/584 (88%), Gaps = 10/584 (2%) Strand=Plus/Plus Query 77 CATGTTTTTGTTTGATTGGTTCTATGGAATATTTGCGTCGTTAGGTTTGTGGCAGAAAGA 136 |||||| ||||| ||||||||||| ||||| || || |||||||| || ||||| ||||| Sbjct 71 CATGTTCTTGTTCGATTGGTTCTACGGAATCTTAGCTTCGTTAGGGTTATGGCAAAAAGA 130 Query 137 AGCGAAGATCTTGTTTCTAGGCCTCGACAATGCCGGAAAAACTACTTTACTTCACATGCT 196 ||| |||||||||||||| || ||||| ||||| || |||||||| |||||||||||||| Sbjct 131 AGCAAAGATCTTGTTTCTCGGTCTCGATAATGCTGGCAAAACTACATTACTTCACATGCT 190 Query 197 CAAAGACGAGAGATTAGTTCAGCACCAGCCAACACAGCATCCCACGTCTGAGGAACTTAG 256 |||||||||||||||||||||||| ||||| || || ||||| |||||||| |||||||| Sbjct 191 CAAAGACGAGAGATTAGTTCAGCATCAGCCGACGCAACATCCAACGTCTGAAGAACTTAG 250 Query 257 CATTGGCAAAATCAAGTTCAAGGCCTTTGATTTGGGTGGCCATCAGATTGCTCGTCGGGT 316 |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| |||| Sbjct 251 CATTGGAAAAATCAAGTTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGTAGGGT 310 Query 317 TTGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTACGACAG 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 311 TTGGAAAGATTACTATGCCAAGGTTGATGCTGTTGTCTACCTTGTGGATGCTTATGACAA 370 Query 377 GGAGAGATTTGTGGAGTCGAAAAGAGAGCTAGACGCTCTTTTATCAGATGAAGCC-TTAG 435 || ||||||| ||||| ||||||||||| || |||||| | || ||||||||| || | Sbjct 371 AGAAAGATTTGCAGAGTCAAAAAGAGAGCTTGATGCTCTTCTCTCGGATGAAGCCCTT-G 429 Query 436 CAAATGTTCCC-TGTCTTATTCTTGGCAACAAGATTGATATTCCTTATGCATCCTCAGAA 494 ||| ||| ||| | ||| |||||||| |||||||||||||| ||||||||| | || ||| Sbjct 430 CAACTGT-CCCGTTTCTGATTCTTGGGAACAAGATTGATATCCCTTATGCAGCTTCTGAA 488 Query 495 GATGAGCTCAGGTATCACTTGGGTCTCACCAATTTCACTACCGGTAAAGGCAATGTCA-G 553 || || || |||||||||||||||||||| || ||||| |||||||| ||||| || | | Sbjct 489 GACGAACTGAGGTATCACTTGGGTCTCACTAACTTCACCACCGGTAAGGGCAAAGTGACG 548 Query 554 TCTTGAAAACTCTGGTGTTCGTCCC-CTTGAGGTCTTCATGTGCAGCATCGTCCGCAAAA 612 || | | ||||||||||||| ||| ||||||||||||||||||||||| ||||| |||| Sbjct 549 -CTCGGAGACTCTGGTGTTCG-CCCACTTGAGGTCTTCATGTGCAGCATTGTCCGTAAAA 606 Query 613 TGGGTTATGGTGAAGGG-TTCAAATGGCTATCTCAGTATATCAA 655 |||||||||| || ||| ||||||||||| |||||||| ||||| Sbjct 607 TGGGTTATGGCGA-GGGATTCAAATGGCTCTCTCAGTACATCAA 649 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31848449198 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5