BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471013 Length=1241 Score E Sequences producing significant alignments: (Bits) Value AT1G09240.1 | Symbols: NAS3, ATNAS3 | nicotianamine synthase 3 ... 1941 0.0 AT1G56430.1 | Symbols: ATNAS4, NAS4 | nicotianamine synthase 4 ... 701 0.0 > AT1G09240.1 | Symbols: NAS3, ATNAS3 | nicotianamine synthase 3 | chr1:2984881-2986130 FORWARD LENGTH=1250 Length=1250 Score = 1941 bits (1051), Expect = 0.0 Identities = 1184/1247 (95%), Gaps = 14/1247 (1%) Strand=Plus/Plus Query 1 ACACCACCCGAGAACACACAATTATTTTCCAAAGA-AACAGAGAAAAACCAATAACCTCA 59 ||||||||||||||||||| |||||| |||||||| || ||||||||| |||||||||| Sbjct 1 ACACCACCCGAGAACACACGATTATTCTCCAAAGAGAA-AGAGAAAAATCAATAACCTC- 58 Query 60 TAGCTAGTGTCGACATGGGTTGCCAAGACGAACAATTGGTGCAAACAATATGCGATCTCT 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59 -A--TAGTGTCGACATGGGTTGCCAAGACGAACAATTGGTGCAAACAATATGCGATCTCT 115 Query 120 ACGAAAAGATCTCAAAGCTGGAGAATCTAAAACCATCCGAAGATGTCAACATTCTCTTCA 179 ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 116 ACGAAAAGATCTCAAAGCTTGAGAGTCTAAAACCATCCGAAGATGTCAACATTCTCTTCA 175 Query 180 AGCAGCTTGTTTCCACATGCATCCCACCAAACCCTAACATCGACGTCACCAAGATGTGTG 239 ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 176 AGCAGCTCGTTTCCACATGCATACCACCAAACCCTAACATCGATGTCACCAAGATGTGTG 235 Query 240 ACAAAGTCCAAGAGATTCGACTTAACCTCATCAAGATCTGTGG-CGTAGCTGAAGGTCAC 298 ||| ||||||||||||||||||||| ||||||||||| ||||| | |||| ||||||||| Sbjct 236 ACAGAGTCCAAGAGATTCGACTTAATCTCATCAAGATTTGTGGTC-TAGCCGAAGGTCAC 294 Query 299 TTAGAACATCATTTCTCTTCGATCTTGACTTCTTTCCAAGACAACCCACTTCATCATTTA 358 |||||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 295 TTAGAAAACCATTTCTCTTCGATCTTGACCTCTTACCAAGACAACCCACTTCATCATTTA 354 Query 359 AACATTTTCCCTTATTACAACAACTATTTAAAACTAGGAAAGCTCGAATTCGACCTCCTC 418 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct 355 AACATTTTCCCTTATTACAACAACTATTTGAAACTCGGAAAGCTCGAGTTCGACCTCCTC 414 Query 419 -ACACAAAA-CTCAAATGGCTTTGTCCCAAAGAGTGTGGCCTTCATTGGATCTGGTCCTC 476 | |||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 415 GA-ACAAAACCT-AAATGGCTTTGTCCCAAAGAGTGTGGCTTTCATTGGATCTGGTCCTC 472 Query 477 TTCCTCTTACTTCCATCGTTCTTGCTTCATTACATCTCAAAGACACAATCTTTCACAACT 536 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 473 TTCCTCTCACTTCCATCGTTCTTGCTTCATTCCATCTCAAAGACACAATCTTTCACAACT 532 Query 537 TTGACATCGACCCATCAGCGAACTCACTCGCTTCCCTTCTGGTTTCCTCTGATCCAGACA 596 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 533 TTGACATCGACCCATCAGCGAACTCACTCGCTTCTCTTCTGGTTTCCTCTGATCCAGACA 592 Query 597 TCTCTCAACGGATGTTCTTCCACACCGTTGATATAATGGACGTGACAGAGAGCTTGAGGA 656 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 593 TCTCTCAACGCATGTTCTTCCACACCGTTGATATAATGGACGTGACAGAGAGCTTAAAGA 652 Query 657 GCTTCGATGTCGTGTTTCTAGCTGCTCTTGTTGGAATGAACAAGGAGGAGAAAGTTAAAG 716 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 653 GCTTTGATGTCGTGTTTCTAGCTGCTCTTGTTGGAATGAACAAAGAGGAGAAAGTTAAAG 712 Query 717 TGATCGAGCATCTGCAGAAACACATGGCTCCTGGTGCTGTGCTCATGCTTAGGAGTGCTC 776 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 713 TGATCGAGCATCTGCAGAAACACATGGCTCCTGGTGCTGTGCTCATGCTTAGGAGTGCTC 772 Query 777 ATGGTCCGAGAGCATTTCTTTATCCGATCGTTGAGCCGTGTGATCTTCAGGGGTTCGAGG 836 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 773 ATGGTCCGAGAGCGTTTCTTTATCCGATCGTTGAGCCGTGTGATCTTCAGGGGTTCGAGG 832 Query 837 TTTTGTCTATTTATCACCCAACAGATGATGTTATCAACTCCGTGGTGATCTCTAAAAAGC 896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 833 TTTTGTCTATTTATCACCCAACAGATGATGTTATCAACTCCGTGGTGATCTCTAAAAAGC 892 Query 897 ATCCTGTTGTTTCAACTGGGAATGTTGGTGGACCTAATTCATGCTTGCTCAAGCCTTGCA 956 |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 893 ATCCAGTTGTTTCAATTGGGAATGTTGGTGGTCCTAATTCATGCTTGCTCAAGCCTTGCA 952 Query 957 ACTGTTCCAAGATCCACGCGATAATGAACAAGAACATGATGATCGAGAAGTTCGGAGCTA 1016 |||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 953 ACTGTTCCAAGACCCACGCGAAAATGAACAAGAACATGATGATCGAGGAGTTCGGAGCTA 1012 Query 1017 GGGAAGAACAGTTGTCTTAAAGACGACGTTTCTTGTCTCTTAATTCTCTATCTTCTGGAA 1076 |||| ||||||||||||||| || |||||||||||| || |||||||||||||| ||||| Sbjct 1013 GGGAGGAACAGTTGTCTTAAGGAGGACGTTTCTTGTTTCCTAATTCTCTATCTTATGGAA 1072 Query 1077 GCTTC-TAATTATGAtttgtatctttgtgttgtgtgtgggtgtcttttcttaattgttct 1135 ||||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||| Sbjct 1073 GCTTCCTAATTATGATTTGTGTCTTTGTGTTGTGTGTTGGTGTCTTTTCTCAATTGTTCT 1132 Query 1136 ttgtttgttt-atttttctttctatatttctAGAAATGGATTTGCTTCCCGCGACACTGT 1194 |||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||| Sbjct 1133 TTGTTTGTTTTATTTTTCTTTCTATATTCCTAGAAATGGATTTGTTTCGCGCGACACTGT 1192 Query 1195 TGGGCTGAAACAGAACACGATTTTGTCTCCTGCTCTTAACTTATTTA 1241 ||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 1193 TGGGCTGAAACAGAACACGATTTTGTCTCATGCTCTTAACATATTTA 1239 > AT1G56430.1 | Symbols: ATNAS4, NAS4 | nicotianamine synthase 4 | chr1:21136944-21138087 FORWARD LENGTH=1144 Length=1144 Score = 701 bits (379), Expect = 0.0 Identities = 695/844 (82%), Gaps = 35/844 (4%) Strand=Plus/Plus Query 64 TAGTGTCGACATGGG---TTGCCAAGACGAACAATTGGTGCAAAC-A-ATATGCGATCTC 118 ||||||||||||||| |||||||||||| ||| | || |||| | || |||||||| Sbjct 70 TAGTGTCGACATGGGTTATTGCCAAGACGACCAACTCGT--AAACAAGATCTGCGATCTT 127 Query 119 TACGAAAAGATCTCAAAGCTGGAGAATCTAAAACCATCCGAAGATGTCAACATTCTCTTC 178 |||||||||||||| ||||| |||| ||||| || | ||||||||| ||| ||||||| Sbjct 128 TACGAAAAGATCTCGAAGCTTGAGACCCTAAAGCCTTGTGAAGATGTCGACACTCTCTTC 187 Query 179 AAGCAGCTTGTTTCCACATGCATCCCACCAAACCCTAACATCGACGTCACCAAGATGTGT 238 |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 188 AAGCAGCTCGTGTCCACATGCATACCACCAAACCCTAACATCGACGTCACCAAGATGTCT 247 Query 239 GACAA-AGTCCAAGAGATTCGACTTAA-CCTCATCAAGATCTGTGGCGTAG-CTGAAGGT 295 || || | |||||||||| || | || ||||||||| |||||||| | || |||||||| Sbjct 248 GAAAACA-TCCAAGAGATGAGA-TCAAACCTCATCAAAATCTGTGGTG-AGGCTGAAGGT 304 Query 296 CACTTAGAACATCATTTCTCTTCGATCTTGACTTCTTTCCAAGACAACCCACTTCATCAT 355 ||||||| ||||| |||||||| ||||| || ||||| |||| ||||| ||||||||| Sbjct 305 TACTTAGAGCATCACTTCTCTTCAATCTTAACCTCTTTTGAAGATAACCCCCTTCATCAT 364 Query 356 TTAAA-CATTTTCCCTTATTACAACAACTATTTAAAACTAGGAAAGCTCGAATTCGACCT 414 || || | |||||| ||| ||||||||||| | |||||| | |||||||| || || || Sbjct 365 TTGAATCTTTTTCC-TTACTACAACAACTACCTCAAACTAAGCAAGCTCGAGTTTGATCT 423 Query 415 CCTC-ACACAAAAC-TCAAATGGCTTTGTCCCAAAGAGTGTGGCCTTCATTGGATCTGGT 472 |||| | ||| ||| | ||| || ||||| |||| || ||| || |||||||| |||||| Sbjct 424 CCTCGA-ACAGAACCT-AAACGGTTTTGTTCCAAGGACTGTAGCTTTCATTGGCTCTGGT 481 Query 473 CCTCTTCCTCTTACTTCCATCGTTCTTGCTTCATTAC-ATCTCAAAGACACAATCTTTCA 531 ||||| |||||||||||| |||||||||| || || | ||||||||||| | |||||||| Sbjct 482 CCTCTCCCTCTTACTTCCGTCGTTCTTGCCTC-TTCCCATCTCAAAGACTCGATCTTTCA 540 Query 532 CAACTTTGACATCGACCCATCAGCGAAC-TCACTCGCTTCCC-TTCTGGTTTCCTCTGAT 589 |||||||||||||||||||||||||| | | || | | || ||||||| |||||| Sbjct 541 TAACTTTGACATCGACCCATCAGCGAATATGG-TAGCAGCTCGTT-TGGTTTCGTCTGAT 598 Query 590 CCAGA-CATCTCTCAACGGATGTTCTTCCACACCGTTGATATAATGGACGTGACAGAGAG 648 || || | | |||||||| ||||| ||||| || |||||||||||||| || || ||||| Sbjct 599 CCTGATCTT-TCTCAACGTATGTTTTTCCATACTGTTGATATAATGGATGTAACCGAGAG 657 Query 649 CTTGA-GGAGCTTCGATGTCGTGTTTCTAG-CTGCTCTTGTTGGAATGAACAAGGAGGAG 706 ||||| || ||||||| || ||||| || | |||||||||| || ||| | || ||||| Sbjct 658 CTTGAAGG-GCTTCGACGTTGTGTT-CTTGGCTGCTCTTGTAGGGATGGATAAAAAGGAG 715 Query 707 AAAGTTAAAGTGATCGAGCATCT-GCAGAAACACATGGCTCCTGGTGCTGTGCTCATGCT 765 || ||||| ||| |||||||||| | ||||||||||| ||||||||||| |||||||||| Sbjct 716 AAGGTTAAGGTGGTCGAGCATCTTG-AGAAACACATGTCTCCTGGTGCTTTGCTCATGCT 774 Query 766 TAGGAGTGCTCATGGTCCGAGAGCATTTCTTTATCCGATCGTTGAGCCGTGTGATCTTC- 824 || || |||||||| || ||||| ||||| ||||| ||||||||||| |||||||| | Sbjct 775 GAGAAGCGCTCATGGACCTAGAGCTTTTCTCTATCCAATCGTTGAGCCTTGTGATCT-CG 833 Query 825 AGGGGTTCGAGGTTTTGTCTATTTATCACCCAACAGATGATGTTATCAACTCCGTGGTGA 884 | || ||||| ||||| || |||||||||| || ||||| |||||||||||| | || | Sbjct 834 AAGGTTTCGAAGTTTTATCGGTTTATCACCCTACCGATGAAGTTATCAACTCCATTGTAA 893 Query 885 TCTC 888 |||| Sbjct 894 TCTC 897 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60993662175 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5