BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471079
Length=1795
Score E
Sequences producing significant alignments: (Bits) Value
AT1G09780.1 | Symbols: | Phosphoglycerate mutase, 2,3-bisphosp... 2983 0.0
AT3G08590.1 | Symbols: | Phosphoglycerate mutase, 2,3-bisphosp... 1520 0.0
> AT1G09780.1 | Symbols: | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
| chr1:3165370-3167869 REVERSE LENGTH=1911
Length=1911
Score = 2983 bits (1615), Expect = 0.0
Identities = 1739/1799 (97%), Gaps = 8/1799 (0%)
Strand=Plus/Plus
Query 1 TTT-TCTCAGATCTGCTTTCAGTTTATTCTTCGATTGCATCTC-AAAAATCTCAGCTATG 58
||| ||||||||||||||| || ||||| |||||||||||| ||||||||||||||||
Sbjct 4 TTTCTCTCAGATCTGCTTTGAG---ATTCTCCGATTGCATCTCAAAAAATCTCAGCTATG 60
Query 59 GCTACCTCCTCCGCCTGGAAGCTCGATGACCATCCTAAACTACCCAAGGGCAAAACCATC 118
|||||||||||||| ||||||||||||||||| || || || |||||||| || ||||||
Sbjct 61 GCTACCTCCTCCGCTTGGAAGCTCGATGACCACCCCAAGCTCCCCAAGGGTAAGACCATC 120
Query 119 GCCTTAATCGTCCTAGATGGTTGGGGTGAATCTGCTCCTGATCAGTACAACTGTATCCAC 178
||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 121 GCCGTAATCGTCTTAGATGGTTGGGGTGAATCTGCCCCTGATCAGTACAACTGTATCCAC 180
Query 179 AACGCTCCTACTCCAGCCATGGATTCTCTTAAACATGGAGCTCCTGATACTTGGACGTTG 238
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 181 AACGCTCCAACTCCAGCCATGGATTCTCTTAAACATGGAGCTCCTGATACTTGGACTTTG 240
Query 239 ATTAAGGCTCACGGTACTGCTGTTGGACTTCCCAGTGAAGATGATATGGGAAACAGTGAG 298
|| || ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 241 ATCAAAGCTCACGGTACTGCTGTAGGACTTCCTAGTGAAGATGATATGGGAAACAGTGAG 300
Query 299 GTTGGTCATAATGCTCTTGGTGCTGGTCGTAT-TTTCGCTCAAGGTGCTAAGCTTTGTGA 357
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 301 GTTGGTCATAATGCTCTTGGTGCTGGTCGTATCTTT-GCTCAAGGTGCTAAGCTTTGTGA 359
Query 358 CCAAGCTCTTGCTTCTGGCAAAATCTTTCAAGGTGAAGGTTTCAAATACGTTTCTGAATC 417
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 360 CCAAGCTCTTGCTTCTGGCAAAATCTTTGAAGGTGAAGGTTTTAAATACGTTTCTGAATC 419
Query 418 TTTCGAGACAAATACTTTGCATCTTGTTGGACTTCTCAGTGACGGTGGAGTCCACTCTCG 477
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 420 TTTCGAGACGAATACTTTGCATCTTGTTGGACTTCTCAGTGACGGTGGAGTTCACTCTCG 479
Query 478 TCTCGATCAGCTACAGTTGTTGATTAAAGGATCTGCTGAACGTGGTGCTAAGAGAATCAG 537
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TCTCGATCAACTACAGTTGTTGATTAAAGGATCTGCTGAACGTGGTGCTAAGAGAATCAG 539
Query 538 AGTCCATATTCTTACTGATGGTCGTGATGTTTTGGATGGTTCTAGTGTTGGATTTGTGGA 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 AGTCCATATTCTTACTGATGGTCGTGATGTTTTGGATGGTTCTAGTGTTGGATTTGTGGA 599
Query 598 AACTCTTGAAGCCGATCTCGTTACATTACGTGAGAATGGTGTGGATGCTCAGATTGCATC 657
||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 600 AACCCTTGAAGCCGACCTCGTTGCATTACGTGAGAATGGTGTGGATGCTCAGATTGCATC 659
Query 658 TGGTGGAGGTCGTATGTATGTGACTTTGGACCGATATGAGAATGATTGGGAAGTTGTTAA 717
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 TGGTGGAGGACGTATGTATGTGACTTTGGACCGATATGAGAATGATTGGGAAGTTGTTAA 719
Query 718 AAGAGGTTGGGATGCTCAAGTTCTTGGAGAAGCTCCTCACAAATTCAAAAACGCTGTTGA 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 AAGAGGTTGGGATGCTCAAGTTCTTGGAGAAGCTCCTCACAAATTCAAAAACGCTGTTGA 779
Query 778 AGCTGTGAAGACTTTGAGGAAAGAACCTGGTGCTAATGACCAGTATTTGCCTCCGTTTGT 837
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 780 AGCTGTGAAGACTTTGAGGAAAGAGCCTGGTGCTAATGACCAGTATTTGCCCCCGTTTGT 839
Query 838 GATTGTTGATGATTCAGGGAAAGCAGTTGGTCCGATTGTGGACGGTGATGCTGTTGTCAC 897
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 840 GATTGTTGATGAATCAGGGAAAGCAGTTGGTCCGATTGTGGACGGTGATGCTGTTGTTAC 899
Query 898 CTTCAACTTCAGGGCTGACCGTATGGTTATGCATGCTAAGGCACTTGAGTATGAAGATTT 957
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 900 CTTCAACTTCAGGGCTGATCGTATGGTTATGCATGCTAAGGCACTTGAGTACGAAGATTT 959
Query 958 TGACAAATTTGATCGTGTGAGGTTCCCCAAGATTCGTTATGCTGGTATGCTTCAGTATGA 1017
|||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 960 TGACAAATTTGACCGTGTGAGGTACCCAAAGATTCGTTATGCTGGTATGCTTCAGTATGA 1019
Query 1018 TGGAGAGCTTAAGCTACCAAGCCGTTACCTCGTTTCTCCCCCGGAGATTGATAGAACTTC 1077
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1020 TGGAGAGCTTAAGCTACCAAGCCGTTACCTTGTTTCTCCCCCGGAGATTGATAGAACATC 1079
Query 1078 TGGTGAATATTTGGCTCACAATGGCGTCAGTACTTTTGCTTGCAGTGAGACCGTCAAATT 1137
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1080 TGGTGAATATTTGACTCACAATGGCGTCAGTACTTTTGCTTGCAGTGAGACCGTCAAGTT 1139
Query 1138 TGGGCATGTCACCTTCTTCTGGAATGGAAACCGATCTGGATATTTCAACGAGAAATTGGA 1197
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1140 TGGGCATGTCACCTTCTTCTGGAATGGAAATCGATCTGGATATTTCAACGAGAAATTGGA 1199
Query 1198 GGAGTATGTTGAAATCCCAAGTGACAGTGGAATATCATTCAATGTCCAACCAAAGATGAA 1257
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1200 GGAGTATGTTGAAATCCCAAGTGACAGTGGAATATCATTCAATGTCCAGCCAAAGATGAA 1259
Query 1258 AGCTCTAGAAATTGGTGAGAAGGCAAGGGATGCAATCCTTAGTGGCAAGTTTGATCAGGT 1317
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 AGCTCTGGAAATTGGTGAGAAGGCAAGGGATGCAATCCTTAGTGGCAAGTTTGATCAGGT 1319
Query 1318 GCGAGTTAACATTCCAAATGGAGATATGGTGGGTCATACAGGTGATATTGAAGCCACGGT 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 GCGAGTTAACATTCCAAATGGAGATATGGTGGGTCATACAGGTGATATTGAAGCCACGGT 1379
Query 1378 TGTTGCATGCGAGGCTGCTGATCTTGCTGTGAAGATGATTTTTGATGCAATCGAACAAGT 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 TGTTGCATGCGAGGCTGCTGATCTTGCTGTGAAGATGATTTTTGATGCAATCGAACAAGT 1439
Query 1438 GAAAGGAATTTATGTTGTGACTGCTGATCACGGAAACGCAGAGGACATGGTGAAGAGGGA 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 GAAAGGAATTTATGTTGTGACTGCTGATCACGGAAACGCAGAGGACATGGTGAAGAGGGA 1499
Query 1498 TAAATCTGGGAAGCCTGCTTTGGATAAGGAAGGGAAGCTTCAGATTCTAACCTCTCACAC 1557
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 TAAATCTGGCAAGCCTGCTTTGGATAAGGAAGGGAAGCTTCAGATTCTAACCTCTCACAC 1559
Query 1558 ACTCAAGCCAGTGCCGATTGCTATTGGAGGTCCTGGCTTGTCTAAAGGAGTGAGATTCCG 1617
||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||
Sbjct 1560 ACTCAAGCCAGTGCCAATTGCTATTGGAGGTCCTGGTTTGGCTCAAGGAGTGAGATTCCG 1619
Query 1618 TAAAGATTTGGAAACACCAGGGCTTGCAAATGTAGCTGCAACAGTGATGAACCTCCATGG 1677
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 TAAAGATCTGGAAACACCGGGGCTTGCAAATGTAGCTGCAACAGTGATGAACCTCCATGG 1679
Query 1678 ATTTGTGGCTCCCTCTGACTATGAGCCCACCCTAATTGAAGTAGTGGAGTAGAAGAATTG 1737
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1680 ATTTGTGGCTCCCTCTGACTATGAGCCCACCCTGATTGAAGTAGTGGAGTAGAAGAATTG 1739
Query 1738 AGAGCCTAATCAGTTTTT-AAGAGAGGGCTGAAACTCTCTAGTTATCTTTTGTTGCTTT 1795
||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 AGAGCCTTATCAGTTTTTGAAGAGAGGGCTGAAACTCTCTAGTTATCTTTTGTTGCTTT 1798
> AT3G08590.1 | Symbols: | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
| chr3:2608471-2611418 REVERSE LENGTH=1986
Length=1986
Score = 1520 bits (823), Expect = 0.0
Identities = 1375/1644 (84%), Gaps = 28/1644 (2%)
Strand=Plus/Plus
Query 73 CTGGAAGCTCGATGACCATCCTAAACTACCCAAGGGCAAAACCATCGCCTTAATCGTCCT 132
|||||| || | ||||| || || || ||||| |||||||| |||| || || || ||
Sbjct 115 CTGGAAACTTGCGGACCACCCCAAGCTTCCCAAAGGCAAAACTATCGGTTTGATTGTTCT 174
Query 133 AGATGGTTGGGGTGAATCTGCTCCTGATCAGTACAACTGTATCCACAACGCTCCTACTCC 192
||||| ||||||||||||| ||| ||||| ||||| || ||||| || ||||| |||||
Sbjct 175 CGATGGATGGGGTGAATCTGATCCCGATCAATACAATTGCATCCATAAAGCTCCAACTCC 234
Query 193 AGCCATGGATTCTCTTAAACA-TGG-AGCTCCTGATACTTGGACGTTGATTAAGGCTCAC 250
||||||||||| |||||| | || ||| || || || |||| |||||| || |||||
Sbjct 235 TGCCATGGATTCCCTTAAAGACGGGAAGC-CC-GACACATGGAGGTTGATCAAAGCTCAT 292
Query 251 GGTACTGCTGTTGGACTTCCCAGTGAAGATGATATGGGAAACAGTGAGGTTGGTCATAAT 310
||||| || ||||| || ||||| ||||| || |||||||||||||| ||||| || |||
Sbjct 293 GGTACCGCCGTTGGTCTCCCCAGCGAAGACGACATGGGAAACAGTGAAGTTGGCCACAAT 352
Query 311 GCTCTTGGTGCTGGTCGTATTTTCGCTCAAGGTGCTAAGCTTTG-TGACCAAGCTCTTGC 369
|||||||| |||||||| |||| ||||||||||||||||| ||| ||| | || |||||
Sbjct 353 GCTCTTGGAGCTGGTCGAATTTACGCTCAAGGTGCTAAGC-TTGTTGATCTCGCCCTTGC 411
Query 370 TTCTGGCAAAATCTTTCAAGGTGAAGGTTTCAAATACGTTTCTGAATCTTTCGAGACAA- 428
||| || ||||||| | ||| |||||||||||||||| | ||| ||||||| |||| ||
Sbjct 412 TTCAGGGAAAATCTATGAAGATGAAGGTTTCAAATACATCTCTCAATCTTTTGAGA-AAG 470
Query 429 ATACTTTGCATCTTGTTGGACTTCTCAGTGACGGTGGAGTCCACTCTCGTCTCGATC-AG 487
||| |||| ||| |||| ||||| || || |||||||| ||||||||| | |||| ||
Sbjct 471 GCACTGTGCACCTTATTGGTCTTCTAAGCGATGGTGGAGTTCACTCTCGTTTGGATCAAG 530
Query 488 CTACAGTTGTTGATTAAAGGATCTGCTGAACGTGGTGCTAAGAGAATCAGAGTCCATATT 547
| |||||| || |||| || | ||| ||||||||||||||||||||| | |||||||||
Sbjct 531 -TCCAGTTGCTGCTTAAGGGTTTTGCAGAACGTGGTGCTAAGAGAATCCGCGTCCATATT 589
Query 548 CTTACTGATGGTCGTGATGTTTTGGATGGTTCTAGTGTTGGATTTGTGGAAACTCTTGAA 607
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 590 CTTACTGATGGTCGTGATGTTTTGGATGGTTCTAGTGTCGGATTTGTTGAAACTCTTGAA 649
Query 608 GCCGATCTCGTTACATTACGTGAGAATGGTGTGGATGCTCAGATTGCATCTGGTGGAGGT 667
|| || || | | | ||||||| ||| ||||| ||||||||| |||||||||||||||||
Sbjct 650 GCTGACCTAGCTGCTTTACGTGCGAAAGGTGTTGATGCTCAGGTTGCATCTGGTGGAGGT 709
Query 668 CGTATGTATGTGACTTTGGACCGATATGAGAATGATTGG-GAAGTTGTTAAAAGAGGTTG 726
|| |||||||| || ||||||| ||||||||||||||| | ||||||||| |||||||
Sbjct 710 CGAATGTATGTCACAATGGACCGTTATGAGAATGATTGGAGT-GTTGTTAAACGAGGTTG 768
Query 727 GGATGCTCAAGTTCTTGGAGAAGCTCCTCACAAATTCAAAAACGCTGTTGAAGCTGTGAA 786
|||||| ||||| ||||| |||||||| |||||||| |||| |||| ||||||| || ||
Sbjct 769 GGATGCACAAGTCCTTGGGGAAGCTCCCCACAAATTTAAAAGCGCTCTTGAAGCAGTTAA 828
Query 787 GACTTTGAGGAAAGAACCTGGTGCTAATGACCAGTATTTGCCTCCGTTTGTGATTGTTGA 846
||| ||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||
Sbjct 829 GACACTGAGGGCAGAACCTGGTGCCAATGACCAGTATTTGCCTTCGTTTGTTATTGTTGA 888
Query 847 TGATTCAGGGAAAG-CAGTTGGTCCGATTGTGGACGGTGATGCTGTTGTCACCTTCAACT 905
|||| | |||||| | || ||||| ||||| || ||||| || ||||| || ||||| |
Sbjct 889 TGATA-ATGGAAAGGCTGTGGGTCCAATTGTTGATGGTGACGCAGTTGTTACATTCAATT 947
Query 906 TCAGGGCTGACCGTATGGTTATGCATGCTAAGGCACTTGAGTATGAAGATTTTGACAAAT 965
|| | ||||| || ||||| |||||||| ||||| || || || ||||||| ||||| |
Sbjct 948 TCCGTGCTGATCGAATGGTCATGCATGCAAAGGCCCTCGAATACAAAGATTTCGACAAGT 1007
Query 966 TTGATCGTGTGAGGT-TCCCCAAGATTCGTTATGCTGGTATGCTTCAGTATGATGGAGAG 1024
||||||| || | || |||| | || |||||||| || ||||| || ||||||||||||
Sbjct 1008 TTGATCGCGT-ACGTGTCCCTGATATACGTTATGCAGGAATGCTCCAATATGATGGAGAG 1066
Query 1025 CTTAAGCTACCAAGCCGTTACCTCGTTTCTCCCCCGGAGATTGATAGAACTTCTGGTGAA 1084
|||||||| || ||||| || || |||||||| || |||||| |||||||||||||||
Sbjct 1067 CTTAAGCTTCCTAGCCGCTATCTTGTTTCTCCACCATTGATTGACAGAACTTCTGGTGAA 1126
Query 1085 TATTTGGCTCACAATGGCGT-CAGTACTTTTGCTTGCAGTGAGACCGTCAAATTTGGGCA 1143
||| |||| ||||||||||| | |||||||||||||||||||||| || || ||||| ||
Sbjct 1127 TATCTGGCACACAATGGCGTTC-GTACTTTTGCTTGCAGTGAGACTGTGAAGTTTGGCCA 1185
Query 1144 TGTCACCTTCTTCTGGAATGGAAACCGATCTGGATATTTCAACGAGAAA-TTGGAGGAGT 1202
||| ||||||||||||||||| ||||| |||||||||||||| || ||| || || ||||
Sbjct 1186 TGTAACCTTCTTCTGGAATGGCAACCGCTCTGGATATTTCAATGA-AAAGTTAGAAGAGT 1244
Query 1203 ATGTTGAAATCCCAAGTGACAGTGGAATATCATTCAATGTCCAACCAAAGATGAAAGCTC 1262
| ||||| || |||||||| ||||||||||||||||||||||| |||||||||||||| |
Sbjct 1245 ACGTTGAGATTCCAAGTGATAGTGGAATATCATTCAATGTCCAGCCAAAGATGAAAGCAC 1304
Query 1263 TAGAAATTGGTGAGAAGGCAAGGGATGCAATCCTTAGTGGCAAGTTTGATCAGGTGCGAG 1322
| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||| |
Sbjct 1305 TGGAAATTGCCGAGAAAGCAAGGGATGCTATCCTTAGTGGCAAGTTTGACCAGGTGCGTG 1364
Query 1323 TTAACATTCCAAATGGAGATATGGTGGGTCATACAGGTGATATTGAAGCCACGGTTGTTG 1382
| ||| | |||||||||||||||||||| ||||| |||||||||||||| || |||||||
Sbjct 1365 TAAACCTGCCAAATGGAGATATGGTGGGGCATACTGGTGATATTGAAGCAACTGTTGTTG 1424
Query 1383 CATGCGAGGCTGCTGATCTTGCTGTGAAGATGATTTTTGATGCAATCGAACAAGT-GAAA 1441
| || || |||||||||| |||||||| || || ||||||| || ||||| || | |
Sbjct 1425 CCTGTGAAGCTGCTGATCGTGCTGTGAGGACAATCCTTGATGCCATAGAACAGGTCGGAG 1484
Query 1442 GGAATTTATGTTGTGACTGCTGATCACGGAAACGCAGAGGACATGGTGAAGAGGGATAAA 1501
||| | || ||||||||||| ||||||||||| || ||||||||||| || ||||| |||
Sbjct 1485 GGA-TATACGTTGTGACTGCAGATCACGGAAATGCTGAGGACATGGTTAAAAGGGACAAA 1543
Query 1502 TCTGGGAAGCCTGCTTTGGATAAGGAAGGGAAGCTTCAGATTCTAACCTCTCACACACTC 1561
|| || ||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 1544 TCCGGCAAGCCTGCTCTCGATAAGGAAGGGAACCTTCAGATTCTTACCTCTCACACCCTT 1603
Query 1562 AAGCCAGTGCCGATTGCTATTGGAGGTCCTGGCTTGTCTAA-AGGAGTGAGATTCCGTAA 1620
|| |||||||| ||||| || ||||||||||||||||| | |||||| || || | |
Sbjct 1604 AAACCAGTGCCAATTGCCATAGGAGGTCCTGGCTTGTC-AGCAGGAGTTAGGTTTAG-AC 1661
Query 1621 AG-ATTTGGAAACACCAGGGCTTGCAAATGTAGCTGCAACAGTGATGAACCTCCATGGAT 1679
|| || | || ||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1662 AGGATATCGAGACACCTGGGCTTGCAAATGTAGCTGCGACAGTGATGAACCTCCATGGAT 1721
Query 1680 TTGTGGCTCCCTC-TGACTATGAG 1702
||||||| ||| ||||||||||
Sbjct 1722 TTGTGGC-CCCGAGTGACTATGAG 1744
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88804764105
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5