BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471124
Length=2802
Score E
Sequences producing significant alignments: (Bits) Value
AT1G10090.1 | Symbols: | Early-responsive to dehydration stres... 4194 0.0
AT1G58520.2 | Symbols: RXW8 | lipases;hydrolases, acting on est... 1528 0.0
AT1G10070.1 | Symbols: ATBCAT-2, BCAT-2 | branched-chain amino ... 206 1e-51
> AT1G10090.1 | Symbols: | Early-responsive to dehydration stress
protein (ERD4) | chr1:3290311-3296198 REVERSE LENGTH=2910
Length=2910
Score = 4194 bits (2271), Expect = 0.0
Identities = 2645/2823 (94%), Gaps = 36/2823 (1%)
Strand=Plus/Plus
Query 1 ATCATTATCTTTCTTTAAATTTGTTGGATTTTTTGCATATTGCAAAGTTTTGAACGCGAG 60
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 74 ATCATTATCTTTCTTTAATTTTGTTGGATTTTTTGCATATTGCAAAGTTTAGAACGCGAG 133
Query 61 CGAATTCTCCGGGGAATTCGGGTTAAAAGGTAGAAATTATTAGGGTTTTTGATTCTTCGG 120
||||||||||| |||||| ||||||||||| |||| || |||||||||||||||||||||
Sbjct 134 CGAATTCTCCGCGGAATTGGGGTTAAAAGGAAGAACTT-TTAGGGTTTTTGATTCTTCGG 192
Query 121 GTTTTCTCATACTTTCGATTCCTTTCAAGTCAAAGCAAAGCATTGCCTTTTC--GTCCAT 178
|||||||| | |||| |||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 193 GTTTTCTCGTGCTTT-GATTCCTTTCAAGTCAAAGCAAAGCATTACCTTTTCTCGTCCAT 251
Query 179 GTAAGTCAGAATTGTTACAAATTATTGTT-TGTTTTCTTGATCAGCTATTA---TGTTCT 234
| | || || | || | | | || || || | |||| || | || ||
Sbjct 252 ATCTTTT-GACGACCTA-AGTTTCT-GCTGTGAATTGTTAAACAGCCATCAGCCTGGGCT 308
Query 235 TC-TCT-GTCTTCTTTATTTAATAAGGCAGGGTTTGAACTAAAATTGAGATAGTGAGATG 292
| | | | | | | || || ||||||||||||||||||| |||||||||||||||
Sbjct 309 TGAT-TAGCCAACCCTGTT-AA---GGCAGGGTTTGAACTAAAAGTGAGATAGTGAGATG 363
Query 293 GATGTCTCATCACTTTTAACGTCTGCTGGGATTAATATAGGGATATGCGTAGTGCTTGTA 352
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 364 GATGTCTCAGCACTTTTAACGTCTGCTGGGATTAATATAGCGATATGCGTAGTGCTTGTA 423
Query 353 TCGCTTTATTCCATTCTACGAAAGCAGCCAGCCAATTATTGTGTTTACTTTGGTCGATTG 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 424 TCGCTTTATTCCATTCTACGAAAGCAGCCAGCCAATTATTGTGTTTACTTTGGTCGATTG 483
Query 413 CTTTCCGACGGAAGAGTTAAACGTCATGATCCTCGTTGGTATGAGAGGTTTGCTCCCTCT 472
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 484 CTTTCTGACGGAAGAGTTAAACGTCATGATCCTCGTTGGTATGAGAGGTTCGCGCCCTCT 543
Query 473 CCAAGTTGGCTCGTGAAAGCTTGGGAAACTACTGAGGACGAGATGTTGGCTGCTGCTGGT 532
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 544 CCTAGTTGGCTCGTGAAAGCTTGGGAAACCACTGAGGAAGAGATGTTGGCTGCTGCTGGT 603
Query 533 CTGGACGCTGTGGTTTTCATCAGGATGGTCATTTGCAGCATTCGTATTTTCTCAATCGTG 592
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 CTGGATGCTGTGGTTTTCATCAGGATGGTCATTTGCAGCATTCGTATTTTCTCAATCGTC 663
Query 593 GCAGTCGTTTGCATTGCCTTTGTGCTACCTGTTAACTATTATGGACAAAAGACTGC-GCA 651
|||||||||||| ||||||||||| ||||||||||||||||||||||||||| || |||
Sbjct 664 GCAGTCGTTTGCCTTGCCTTTGTGTTACCTGTTAACTATTATGGACAAAAGA-TGGAGCA 722
Query 652 CAAGGAGGTCCATCTGGAGTCGTTGGGAATATTCACAATTGAGAACCTCAATCAACGCTC 711
|||||| |||||| ||||||| |||||| ||||||||||||||||||| |||| ||||||
Sbjct 723 CAAGGAAGTCCATTTGGAGTCATTGGGAGTATTCACAATTGAGAACCTTAATCCACGCTC 782
Query 712 ACGATGGCTCTGGGTTCATTGTCTCGCATTGTACATCATATCCTCTGCAGCATGTGCTCT 771
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 783 ACGATGGCTCTGGGTTCATTGTCTCTCATTGTACATCATATCCTCTGCAGCATGTGCTCT 842
Query 772 TCTTTACTTTGAATATAAGAACATAGCCAAAAGGAGGCTTGCCCATATTACTGGATCTAC 831
|||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |
Sbjct 843 TCTTTACTTTGAGTATAAGAACATAGCCAAAAAGAGGCTTGCCCATATTAGTGGATCTGC 902
Query 832 CTCAAAGCAAAGTCATTTTACTGTTCTTATTCGTGCTATTCCTCAGTCTCCTGACCAGTC 891
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 CTCAAAGCCAAGTCATTTTACTGTTCTTATTCGTGCTATTCCTCAGTCTCCTGACCAGTC 962
Query 892 CTACAGCGAGACGGTGAGCAAATACTTCACAAATTACTATGCACCAAGCTATGTGTCGCA 951
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 963 CTACAGCGAGACAGTGAGCAAATACTTTACAAATTACTATGCACCAAGCTATGTGTCGCA 1022
Query 952 CCTAATGGTCTACCGTGATGGCTTCATTCACAGACTGATGAATGAGACGGAGAGGATGTG 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1023 CCTAATGGTCTACCGTGATGGCTTCATTCACAGACTGATGAATGAGACGGAGAGGATGTG 1082
Query 1012 TCAGGCTATAAAACATGTTTCTCCTGATTTAAGTTGTAATCCGAGTTTGAAGTCATGTGC 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1083 TCAGGCTATAAAACATGTTTCTCCTGATTTAAGTTGTAATCCGAGTTTGAAGTCATGCGT 1142
Query 1072 CCTTTGTGGACCTGCAGCCACAAATTCTTTTCAAATCCTCTCGAACGAGACAGACAGTGT 1131
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1143 CCTTTGTGGACCTGCAGCCACAAATTCTTTTCAAATCATCTCGAACGAGACAGACAGTGT 1202
Query 1132 CAAAGGAC---AGCTTGGTGAGTTGACTTTGACTACGACAGAGGAAGAACGTCCCGTTGC 1188
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 CAAAGGATTGGAGCTTGGTGAGTTGACTTTGACTACGACAGAGGAAGAACGTCCCGTTGC 1262
Query 1189 TTTTGTGTTTTTCAAGAGTCGTTATGATGCTCTTGTTGTTTCAGAGGTTCTTCAAACACC 1248
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1263 TTTTGTGTTTTTCAAGAGTCGTTATGATGCTCTTGTTGTTTCAGAAGTTCTTCAAACACC 1322
Query 1249 AAATCCTATGTTATGGGTGGCAGACTTGGCGCCAGAGCCTCATGATGTTCACTGGAGGAA 1308
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1323 AAATCCTATGTTATGGGTGGCAGACTTGGCTCCAGAGCCTCATGATGTTCACTGGAGAAA 1382
Query 1309 TCTCAGAATACCTTATCGGCAACTTTGGATGCGAAGAATAGCAACCCTTGTTGGTGCAGT 1368
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 1383 TCTCAGAATACCTTATCGGCAGCTTTGGATGCGAAGAATAGCAACCCTTGTTGGTGCAAT 1442
Query 1369 TGCCTTCATGTTTGTGTTTCTTTTCCCTGTTGCCTTTGTTCAAGGGCTGACTCAGCTACA 1428
|||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||
Sbjct 1443 TGCCTTCATGTTTGTGTTTCTTTTTCCTGTTACCTTTGTTCAAGGGCTGACTCAACTACC 1502
Query 1429 AACGCTATCCAAGAATTTTCCTTTTCTAAGAGACCTCTTGCACAAGG-GGTTTATGAAGC 1487
|||| |||||||||||||||||||||||| |||||||||| ||| || |||||||| |||
Sbjct 1503 AACGTTATCCAAGAATTTTCCTTTTCTAAAAGACCTCTTGAACA-GGAGGTTTATGGAGC 1561
Query 1488 AGGTCATCACAGGGTACTTACCAAGTGTGATTTTGGTTCTATTCTTTTATGCCGTTCCGC 1547
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1562 AGGTCATCACAGGGTATTTACCAAGTGTGATTTTGGTTCTATTCTTTTATACCGTTCCGC 1621
Query 1548 CATTGATGATGTACTTTTCAACCTTGGAGGGATGTGTTTCTCGGAGTCTAAGAAAGAAAA 1607
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 1622 CATTGATGATGTACTTTTCAACCTTGGAGGGATGTGTTTCTCGGAGTCAAAGAAAAAAAA 1681
Query 1608 GTGCATGTATCAAAATTTTATACTTTACCATCTGGAATGTGTTCTTCGTCAATATTCTAT 1667
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1682 GTGCATGTCTCAAAATTTTATACTTCACCATCTGGAATGTGTTCTTCGTCAATATTCTAT 1741
Query 1668 CAGGCTCTGTTATCAGGCAGTTGAGCGTCTTGTCTAGTGTGAGGGACATACCTGCACAAC 1727
|||||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||||
Sbjct 1742 CAGGCTCTGTTATCAGGCAGTTTACCGTCTTGAATAGTGTGAGGGACGTACCTGCACAAC 1801
Query 1728 TTGCGAAAGTAGTTCCAGCACAGGTTGGCTTCTTCATGACCTATTGTTTCACATCTGGTT 1787
|||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 1802 TTGCGAAACTTGTTCCAGCACAGGCTGGCTTCTTCATGACCTATTGTTTCACGTCTGGTT 1861
Query 1788 GGGCCGGTTTGGCATGTGAAATCATGCAACCTGTATGTCTTATCTGGAATCTGATAGCAA 1847
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct 1862 GGGCCGGTTTGGCATGTGAAATCATGCAACCTGTAGGTCTTATTTGGAATCTGATTGCAA 1921
Query 1848 AAGTTATTGTCAAGAACAAGGAGGACTCATATGAAACACTTAGGTTTCCGTACCATACAG 1907
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1922 AAGTTATTGTTAAGAACAAGGAGGAGTCATATGAAACACTTAGGTTTCCCTACCATACAG 1981
Query 1908 AAATTCCTCGACTACTTTTGTTCGGGCTCCTAGGTTTCACAAATTCAGTCATAGCGCCTC 1967
||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1982 AAATTCCAAGACTACTTTTGTTCGGGCTCCTGGGTTTCACCAATTCAGTCATAGCGCCTC 2041
Query 1968 TAATACTGCCGTTTCTGCTGATCTACTTTTTCTTCGCATATCTTATATACAAAAATCAGA 2027
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2042 TGATACTGCCGTTTCTGCTGATCTACTTTTTCTTCGCATATCTTATATACAAAAATCAGA 2101
Query 2028 TAATCAACGTCTATATTACAAAATATGAAAGCGGTGGACAATATTGGCCTGTTTTTCACA 2087
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2102 TAATCAACGTCTATATTACAAAGTATGAAAGCGGTGGACAATATTGGCCTGTTTTTCACA 2161
Query 2088 ACACGACAATCTTTTCACTGATCTTGTCGCAAATTATAGCGCTAGGCTTTTTCGGTTTAA 2147
|||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||
Sbjct 2162 ACACTACAATCTTTTCACTGATCTTGTCGCAAGTTATAGCTCTAGGCTTTTTCGGGTTAA 2221
Query 2148 AGCTATCAACGGTTGCTTCAGGTTTCACCATCCCGTTAATT-TTCCTTACTCTTCTATTT 2206
|||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct 2222 AGCTATCAACGGTTGCTTCAGGTTTCACCATCCCGTTAATCCTTC-TCACTCTTCTATTT 2280
Query 2207 AGTGAGTATTGCCGGCAAAGATTTGCACCCATATTCAAGAAATATCCAGCCGAGATTCTT 2266
|||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||
Sbjct 2281 AGTGAGTATTGCCGGCAAAGGTTTGCGCCCATATTCCAGAAATATCCAGCCGAGATTCTT 2340
Query 2267 ATCGCTATGGACAGAGCAGATGAGATGACAGGAAAGATGGAAGAGATACATAACAACTTG 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2341 ATCGCTATGGACAGAGCAGATGAGATGACAGGAAAGATGGAAGAGATACATAACAACTTG 2400
Query 2327 AAAGCTGCATACTCTCAGATACCAACGTGTTCTGAGGAATCGAGCAAAGCTGGTTTCACT 2386
|||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct 2401 AAAGTTGCATACTCTCAGATACCAACGTGTTCTGAAGAATCCAGCAAAGCTGGTTGCACT 2460
Query 2387 TCTCCTTGCTCAGATCAGGAGTTACCAGATTCTGAACAGTTGAAACCTGAGAAAGAGAAT 2446
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 2461 TCTCCTTGCTCAGATCAGGAGTTACCAGATTCTGAAGAGTTGAAGCCTGAGAAAGAGAAT 2520
Query 2447 CATAAAGCTGATTACATATGGGCGTTCCAGAGAAGTAAATCTGGTCATGATCTTGAGGTG 2506
| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 2521 CTTAAAGCTGATTACATATGGGAGTTCCAGAGAAGTAAATCTGGTCTTGATCTTGAGGTG 2580
Query 2507 AAATCCTGTCCCAGTGCTTCACCAAATCGTTATTCCCCAGCGTTTGCTGAGATCTACAAA 2566
|||||||||||||||||||| |||| |||| ||||||||| |||||| ||||||||||||
Sbjct 2581 AAATCCTGTCCCAGTGCTTCCCCAATTCGTAATTCCCCAGGGTTTGCCGAGATCTACAAA 2640
Query 2567 CGAACATAGATACTTGAGTTACAATGTATA-TTTG-A-CTCTGCAGATGATTAAG-TGTT 2622
|||||||||||||||||||||||||||||| ||| | |||||||||||| ||| ||||
Sbjct 2641 CGAACATAGATACTTGAGTTACAATGTATACTTTATAACTCTGCAGATGAA-AAGGTGTT 2699
Query 2623 T--GCAGTTGAGTTACAATTTTAGTAGTTGAAGCCCTTATGGGTGATGAAAGTAAGAAGT 2680
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2700 TTTGCAGTTGAGTTACAATTTTAGTAGTTGAAACCCTTATGGGTGATGAAAGTAAGAAGT 2759
Query 2681 GGGGAAAACCATTGAAACGTATATACAGTTTTGCCTCCTAAAATGAAATGTAAATTTGAA 2740
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2760 GGGGAAAGCCATTGAAACGTATATACAGTTTTGCCTCCTAAAATGAAATGTAAATTTGGA 2819
Query 2741 GTTACTGCAGGAGGAAAATGAAACTTTGCTTGGAA-CACTTTTCTACAAGTACAATAGAC 2799
||||||||||||||||| ||||||| | ||||||| ||||| ||||||||||||||||||
Sbjct 2820 GTTACTGCAGGAGGAAA-TGAAACTATCCTTGGAAACACTTGTCTACAAGTACAATAGAC 2878
Query 2800 GAT 2802
|||
Sbjct 2879 GAT 2881
> AT1G58520.2 | Symbols: RXW8 | lipases;hydrolases, acting on ester
bonds | chr1:21729913-21738652 FORWARD LENGTH=3613
Length=3613
Score = 1528 bits (827), Expect = 0.0
Identities = 1411/1686 (84%), Gaps = 67/1686 (4%)
Strand=Plus/Plus
Query 793 CATAGCCAAAAGGAGGCTTGCCCATATTACTGGATCTACCTCAAAGCAAAGTCATTTTAC 852
|||||| |||| |||||||| ||||||||||||| | ||||||||| |||||| |||||
Sbjct 1389 CATAGCTAAAATGAGGCTTGGGCATATTACTGGATGTGCCTCAAAGCCAAGTCAATTTAC 1448
Query 853 TGTTCTTATTCGTGCTATTCC-TCAGTCTCCTGACCAGTCCTACAGCGAGACGGTGAGCA 911
|||||||| ||||||||||| | ||||||||| || || |||||||| ||| ||||||
Sbjct 1449 CGTTCTTATCCGTGCTATTCCAT-GGTCTCCTGAGCAATCTTACAGCGACACGCTGAGCA 1507
Query 912 AATACTTCACAAATTACTA-TGC-ACCAAGCTATGTGTCGCACCTAATGGTCTACCGTGA 969
||| ||||||||| ||||| | | || ||||| ||||| |||| ||||||||||| | |
Sbjct 1508 AATTCTTCACAAACTACTACT-CGTCC-AGCTACGTGTCCCACCAAATGGTCTACCATAA 1565
Query 970 TGGCTTCATTCACAGACTGATGAATGA-GACGGAGAGGATGTGTCAGGCTATAAAACATG 1028
|||| ||||||| |||||| || ||| | ||||||||||||| ||| || ||||||| |
Sbjct 1566 TGGCATCATTCAGAGACTGCTGCGTGATG-CGGAGAGGATGTGCCAGACTCTAAAACACG 1624
Query 1029 TTTCTCCTG-ATTTAAGTTGTAATCCGAGTTTGAA-GTCATGTGCCCTTTGT---GGACC 1083
||||||||| | | || |||||| |||||||| || | |||| || ||||| |||||
Sbjct 1625 TTTCTCCTGAAATCAA-TTGTAAACCGAGTTT-AAGGCCATGCACCTTTTGTGGAGGACC 1682
Query 1084 TGCAGCCACAAATTCTTTTCAAATCCTCTCGAACGAGACAGACAGTGTCAAAGG-A--CA 1140
| ||||||||| ||||||||| ||||| ||||| ||| |||||||||| ||||| | |
Sbjct 1683 TACAGCCACAAGTTCTTTTCATATCCTATCGAATGAGGCAGACAGTGTGAAAGGAATGGA 1742
Query 1141 GCTTGGTGAGTTGACT-T---T--GACTACGACAGAGGAAGAACGTCCCGTTGCTTTTGT 1194
|||||||||||||||| | | ||||||||||||| |||||||| | | |||||||||
Sbjct 1743 GCTTGGTGAGTTGACTATGACTACGACTACGACAGAGCAAGAACGTTCAGCTGCTTTTGT 1802
Query 1195 GTTTTTCAAGAGTCGTTATGATGCTCTTGTTGTTTCAGAGGTTCTTCAAACACCAAATCC 1254
|||||| |||| ||| |||||||||||||||||||| |||||||| ||| || |||||||
Sbjct 1803 GTTTTTTAAGACTCGCTATGATGCTCTTGTTGTTTCGGAGGTTCTACAATCATCAAATCC 1862
Query 1255 TATGTTATGGGTGGCAGACTTGGCGCCAGAGCCTCATGATGT-TCACTGGAGGAATCTCA 1313
||||||||||||| ||||||| || ||||| ||||||||||| | |||||| ||||||||
Sbjct 1863 TATGTTATGGGTGACAGACTTAGCCCCAGAACCTCATGATGTGT-ACTGGAAGAATCTCA 1921
Query 1314 GA-ATACCTTATCGGCAACTTTGGATGC-GAAGAATAGCAACCCTTGTTGGTGCAGTTGC 1371
| || |||||||| ||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct 1922 -ACATTCCTTATCGACAACTTTGGATACGGAA-AATAGCAACCCTTGTTGGTGCAGTTGC 1979
Query 1372 CTTCATGTTTGTGTTTCTT-TTCCCTGTTGCCTTTGTTCAAGGGCTGACTCAGCTACAAA 1430
|||||||||||||||||| ||||| ||| |||| |||||||||||||||| |||
Sbjct 1980 TTTCATGTTTGTGTTTCTTATTCCC-GTTACCTTCATTCAAGGGCTGACTCAACTA-GTG 2037
Query 1431 C-GCTATC-CAAGAATTTTCCTTTTCTAAGAGACCTCTTGCA-CAAGGGGTTTATGAAGC 1487
| ||| || || | | |||||||||||||||| | ||||| | |||| ||||| || |
Sbjct 2038 CAGCTGTCTCACGCA-TTTCCTTTTCTAAGAGGCATCTTG-AGCAAGAACTTTATAAACC 2095
Query 1488 AGGTCATCACAGGGTACTTACCAAGTGTGATTTTGGTTCTATTCTTT-TATGCCGTTCCG 1546
|||||||||||||||||||||| |||||||| ||| ||||||| ||| |||||||||||
Sbjct 2096 AGGTCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATT-TTTCTATGCCGTTCCA 2154
Query 1547 CCATTGATGATGTACTTTTCAACCTTGGAGGGATGTGTTTCTCGGAGTCTAAGAAAGAAA 1606
|||||||||||||| ||||| |||||||||||||| |||| |||||| |||| |||||
Sbjct 2155 CCATTGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAG 2214
Query 1607 AGTGCATGTATCAAAATTTTATACTTTACCATCTGGAATGTGTTCTTCGTCAATAT-TCT 1665
||||| || |||||| | ||||| |||||||| ||||||||||||||||| ||||| | |
Sbjct 2215 AGTGCTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATAT-T 2273
Query 1666 ATCAGGCTCTGTTATCAGGCAGTTGAGCGTCTTGTCTAGTGTGAGGGACATACCTGCACA 1725
|||||| |||||||||||||| ||| ||||| |||||||| || ||||||||||||||
Sbjct 2274 ATCAGGGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACA 2333
Query 1726 ACTTGCGAAAGTAGTTCCAGCACAGGTTGGCTTCTTCATGACCTATTGTTTCACATCTGG 1785
|||||| | || ||| ||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 2334 ACTTGCTAGAGCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGG 2393
Query 1786 TTGGGCCGGTTTGGCATGTGAAATCATGCAACCTGTATG--TCTTATCTGGAATCTGATA 1843
||||||| ||||||| |||||||| ||||| ||| ||| |||||||||||||||| ||
Sbjct 2394 TTGGGCCAGTTTGGCTTGTGAAATAATGCAGCCT--ATGGCTCTTATCTGGAATCTGGTA 2451
Query 1844 GCAAAAGTTATTGTCAAGAACAAGGAGGACTCATATGAAACACTTAGGTTTCCGTACCAT 1903
||||||||| || ||||||| |||| || |||||||||||||||||||| || |||||
Sbjct 2452 GCAAAAGTTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCAC 2511
Query 1904 ACAGAAATTCCTCGACTACTTTTGTTCGGGCTCCTAGGTTTCACAAATTCAGTCATAGCG 1963
|| ||||||||||| || |||||||| |||||||| |||||||| ||||||||||||||
Sbjct 2512 ACCGAAATTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCA 2571
Query 1964 CCTCTAATACTGCCGTTTCTGCTGATCTACTTTTTC-TTCGCATATCTTATATACAAAAA 2022
|| || |||||||||||| ||||||| ||||||||| || |||||||| |||||||||||
Sbjct 2572 CCACTGATACTGCCGTTTTTGCTGATATACTTTTTCCTT-GCATATCTCATATACAAAAA 2630
Query 2023 TCAGATAATCAACGTCTATATTACAAAATATGAAAGCGGTGGACAATATTGGCCTGTTTT 2082
||| ||| ||||||| |||||||| || || ||||||||||||||||| |||||| ||||
Sbjct 2631 TCAAATACTCAACGTGTATATTACGAAGTACGAAAGCGGTGGACAATACTGGCCTATTTT 2690
Query 2083 TCACAACACGACAATCTTTTCACTGATCTTGTCGCAAATTATAGCGCTAGGCTTTTTCGG 2142
|||||||| ||||||||||||||||||||| | || |||||||| | || ||||||||
Sbjct 2691 CCACAACACAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGGGTTTTTCGG 2750
Query 2143 TTTAAAGCTATCAACGGTTGCTTCAGGTTTCACCATCCCGTTAATT-TTCCTTACTCTT- 2200
|||||||||||||| |||||||| ||||||||||| ||||||||| ||| | || ||
Sbjct 2751 ATTAAAGCTATCAACAGTTGCTTCGGGTTTCACCATACCGTTAATTCTTC-TCACG-TTA 2808
Query 2201 CTATTTAGTGAGTATTGCCGGCAAAGATTTGCACCCATATTCAAGAAATATCCAGCCGAG 2260
|| |||||||||||||| ||||| || ||||| ||||| ||||| ||| |||| ||| ||
Sbjct 2809 CTTTTTAGTGAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAG 2868
Query 2261 ATTCTTATCGCTATGGACAGAGCAGATGAGATGA-CAGGAAAGATGGAAGAGATACATAA 2319
|||| || | |||||||||||| ||||| || | ||||||||||||||||| |||||||
Sbjct 2869 GTTCTCATAGATATGGACAGAGCTGATGAAAT-ATCAGGAAAGATGGAAGAGTTACATAA 2927
Query 2320 CAACTTG-A-AAGCTGCATACTCTCAGATACCA--ACGTGTTCTGAGGAATC---GAGCA 2372
|| ||| | || || |||||| ||||||||| || | || || |||| ||| |
Sbjct 2928 AAAATTGCATAA--TGTATACTCGCAGATACCATTACAC-T-CTCAGAAATCATCGAGTA 2983
Query 2373 AAGCTGGTT-TCACTTCTCCTTGCTCAGATCAGGAGTTACCAGATTCTGAACAGTTGAAA 2431
|||||| | | | | ||||| | | | ||||||||||||||| ||||| | |||||
Sbjct 2984 AAGCTGAATGT-AGTAATCCTTTCAAAAAGCAGGAGTTACCAGATCCTGAAAAATTGAAG 3042
Query 2432 CCTGAG 2437
|| |||
Sbjct 3043 CCAGAG 3048
> AT1G10070.1 | Symbols: ATBCAT-2, BCAT-2 | branched-chain amino
acid transaminase 2 | chr1:3288087-3290471 FORWARD LENGTH=1642
Length=1642
Score = 206 bits (111), Expect = 1e-51
Identities = 126/133 (95%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 2671 AGTAAGAAGTGGGGAAAACCATTGAAACGTATATACAGTTTTGCCTCCTAAAATGAAATG 2730
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1642 AGTAAGAAGTGGGGAAAGCCATTGAAACGTATATACAGTTTTGCCTCCTAAAATGAAATG 1583
Query 2731 TAAATTTGAAGTTACTGCAGGAGGAAAATGAAACTTTGCTTGGAA-CACTTTTCTACAAG 2789
|||||||| |||||||||||||||||| ||||||| | ||||||| ||||| ||||||||
Sbjct 1582 TAAATTTGGAGTTACTGCAGGAGGAAA-TGAAACTATCCTTGGAAACACTTGTCTACAAG 1524
Query 2790 TACAATAGACGAT 2802
|||||||||||||
Sbjct 1523 TACAATAGACGAT 1511
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 139213266825
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5