BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471134 Length=916 Score E Sequences producing significant alignments: (Bits) Value AT1G10200.1 | Symbols: WLIM1 | GATA type zinc finger transcript... 1397 0.0 > AT1G10200.1 | Symbols: WLIM1 | GATA type zinc finger transcription factor family protein | chr1:3346390-3347885 REVERSE LENGTH=982 Length=982 Score = 1397 bits (756), Expect = 0.0 Identities = 874/928 (94%), Gaps = 20/928 (2%) Strand=Plus/Plus Query 1 AACAATAATTGACAATCTCTTTCTTTCATCTTCATCCTATTCCTCTTTA------TCTCT 54 |||||||||||||||||||||||||||||||||||| ||||| |||||| ||||| Sbjct 1 AACAATAATTGACAATCTCTTTCTTTCATCTTCATCTTATTCTTCTTTATCTCTCTCTCT 60 Query 55 CTCTCAAAACGATTGAG---C-TTCTTTTTTCCTGAGTCTTTACTTTAGTCTGATCTCTT 110 ||||||| || |||||| | ||||||||||||||||| | |||||||||||||||| Sbjct 61 CTCTCAAGACTATTGAGCTTCTTTCTTTTTTCCTGAGTC--T--TTTAGTCTGATCTCTT 116 Query 111 ACAAAAATGGCGTTCGCAGGAACAACCCAAAAATGCATGGCCTGTGACAAAACCGTTTAT 170 |||| |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct 117 ACAAGAATGGCGTTCGCAGGAACAACCCAGAAATGCATGGCATGTGACAAAACAGTTTAT 176 Query 171 CTTGTTGACAAGTTAACCGCCGATAACCGGGTCTACCACAAAGCTTGTTTCCGATGTCAC 230 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 177 CTTGTCGACAAGTTAACCGCCGATAACCGGGTCTACCACAAAGCTTGTTTCCGATGTCAC 236 Query 231 CATTGCAAAGGAACTCTCAAGCTTAGCAATTACAACTCCTTTGAAGGAGTTCTCTATTGC 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 237 CATTGCAAAGGAACTCTCAAGCTTAGCAATTACAACTCCTTTGAAGGAGTTCTCTACTGC 296 Query 291 AGACCACATTTCGATCAAAACTTCAAGAGAACTGGAAGTCTTGAGAAAAGCTTCGAAGGG 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 AGACCACATTTCGATCAAAACTTCAAGAGAACTGGAAGTCTTGAGAAAAGCTTCGAAGGG 356 Query 351 ACACCAAAGATTGGAAAACCTGATAGGCCTTTGGAGGGAGAGAGACCTGCTGGAACCAAA 410 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 ACACCAAAGATTGGGAAACCTGATAGGCCTTTGGAGGGAGAGAGACCTGCTGGAACCAAA 416 Query 411 GTGTCGAATATGTTTGGTGGAACACGAGAGAAATGCGTTGGCTGCGATAAAACCGTGTAT 470 || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 417 GTTTCGAATATGTTTGGTGGAACACGAGAGAAATGCGTTGGTTGCGACAAAACCGTGTAT 476 Query 471 CCAATTGAGAAGGTGTCGGTGAATGGGACATTGTACCACAAGAGCTGCTTCAAGTGTACA 530 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 477 CCAATTGAGAAGGTATCGGTGAATGGAACATTGTACCACAAGAGCTGCTTCAAGTGTACA 536 Query 531 CATGGAGGTTGCACCATAAGCCCGTCGAATTACATAGCTCACGAGGGAAAGCTTTATTGC 590 |||||||| ||||| |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 537 CATGGAGGCTGCACGATAAGCCCTTCGAATTACATAGCTCACGAGGGTAAGCTATATTGC 596 Query 591 AAGCATCATCATATTCAGCTGATCAAAGAGAAAGGAAACTTGAGCCAGCTCGAAGGAGGA 650 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 597 AAGCATCATCATATTCAGCTGATCAAGGAGAAAGGAAACTTGAGCCAGCTCGAAGGAGGA 656 Query 651 GGAGAGAATGCCGCTAAGGACAAAGACGTCGCTGCTTAAAGAAACAATTCAATCTCTCTG 710 |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 657 GGAGAGAATGCCGCCAAGGACAAAGTCGTCGCTGCTTAAAGAAACAATTCAATCTCTCTG 716 Query 711 G-ATGATTTTGACAATGGAAGAATCAAAAGAGTCACTACTACTTC-TCGATCGATAACAT 768 | ||||||||||| || ||||||||||||||||||||||| || | |||||||||||||| Sbjct 717 GGATGATTTTGACTATCGAAGAATCAAAAGAGTCACTACTTCTCCATCGATCGATAACAT 776 Query 769 ATAttggttttgtttcttcttacgtttgtgtttgtctttttggtctttaagatgttgttg 828 ||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| || Sbjct 777 ATATTGGTTTTGTTTCTTCCTACGTTTGTGTTTTTCTTTTTGGTCTTTAATATGTT-TT- 834 Query 829 tttttttttttGGGATCTTTGTTCACTCTTTTATTGGGTTTCTTGAGATGAAACTAGAGA 888 ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 835 TTTTTTTTT--GGGACCTTTGTTCACTCTTTTATTGGGTTTCTTGAAATGAAACTAGAGA 892 Query 889 AACAGAGAAATAATGGATGTTTGCTTAT 916 |||| ||||||||||||||||||||||| Sbjct 893 AACAAAGAAATAATGGATGTTTGCTTAT 920 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44758624977 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5