BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471142
Length=760
Score E
Sequences producing significant alignments: (Bits) Value
AT1G10310.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1282 0.0
> AT1G10310.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:3381601-3383914 REVERSE LENGTH=901
Length=901
Score = 1282 bits (694), Expect = 0.0
Identities = 738/760 (97%), Gaps = 0/760 (0%)
Strand=Plus/Plus
Query 1 AGAAAGAGAAATTAATCGGCCACGATGACGATGGCGACGCCTTTCAGTGGGGCTGCGAAC 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17 AGAAAGAGAAGGTAATCGGCCACGATGACGATGGCGACGCCTTTCAGTGGGGCTGCGAAC 76
Query 61 TCTGTTGTGGCGGCGAGGACCGTTCTGATAACGGGAGTGAGCAAAGGTCTGGGAAGAGCC 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 TCTATTGTGGCGGCGAGGACCGTTCTGATAACGGGAGTGAGCAAAGGTCTGGGAAGAGCC 136
Query 121 CTAGCTCTCGAGTTGGCCAAGAGAGGTCACTCTGTGATAGGATGCGCTCGTACTCAAGAG 180
|||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||||
Sbjct 137 CTAGCTCTCGAGCTGGCCAAGAGGGGTCACACTGTGATAGGATGCGCTCGTAGTCAAGAG 196
Query 181 AAGCTCACCGCTCTTCAATCGGAGCTCTCCTCTCCGGCCAATCATCTCCTCCTCACCGCT 240
|||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct 197 AAGCTCACCGCTCTTCAATCGGAGCTTTCCTCTTCGACCAATCATCTCCTCCTCACCGCT 256
Query 241 GATGTGAAATCAAACAGCAGTGTCGAAGAACTGGCACAAACAATAATGGAGAAGAAGGGT 300
|||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||
Sbjct 257 GATGTGAAATCAAACAGCAGTGTCGAAGAAATGGCACACACAATTGTGGAGAAGAAGGGT 316
Query 301 GTCCCAGATATCATAGTTAACAACGCTGGTACCATCAATAAGAACAGCAAGATTTGGGAA 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 317 GTCCCAGATATCATAGTTAACAATGCTGGTACCATCAATAAGAACAGCAAGATTTGGGAA 376
Query 361 GTCTCTGCAGAAGATTTTGACAATGTCATGGATACAAACGTTAAAGGAGTAGCAAATGTG 420
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 377 GTCTCTGCTGAAGATTTTGACAATGTCATGGATACAAACGTTAAAGGAGTTGCAAATGTG 436
Query 421 CTTCGCCATTTTATCCCTTTGATGCTCCCACGTAAGCAAGGAATTATTGTGAATATGTCT 480
|| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 437 CTGCGCCATTTTATCCCTTTGATGCTCCCACGCAAGCAAGGAATTATTGTAAATATGTCT 496
Query 481 TCTGGATGGGGAAGATCTGGTGCTGCCCTGGTTGCACCTTACTGTGCATCAAAATGGGCG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 497 TCTGGATGGGGAAGATCTGGTGCTGCCCTGGTTGCACCTTACTGTGCATCAAAATGGGCG 556
Query 541 ATTGAGGGTTTAAGCCGAGCAGTGGCAAAGGAAGTAGTTGAAGGAATGGCAGTAGTTGCA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 557 ATTGAGGGTTTAAGCCGAGCAGTGGCAAAGGAAGTAGTTGAAGGAATGGCAGTAGTTGCA 616
Query 601 TTAAATCCAGGCGTGATTAACACAGAATTACTCACTTCCTGCTTCGGGAACTCAGCTTCC 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 617 TTAAATCCAGGCGTGATCAACACAGAATTACTCACTTCCTGCTTCGGGAACTCAGCTTCC 676
Query 661 TTGTATCAAGCTCCTGATGCTTGGGCTGTGAAGGCTGCAACGATGATTCTGAATCTTACA 720
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 677 TTGTATCAAGCTCCTGATGCTTGGGCTGTGAAGGCTGCGACGATGATTCTGAATCTTACA 736
Query 721 GCGGGTGACAATGGCGGATCTCTCACAGTCTAACAACTAA 760
||||||||||||||||||||||||||||||||||||||||
Sbjct 737 GCGGGTGACAATGGCGGATCTCTCACAGTCTAACAACTAA 776
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36922098045
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5