BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471394 Length=741 Score E Sequences producing significant alignments: (Bits) Value AT1G12440.1 | Symbols: | A20/AN1-like zinc finger family prote... 1112 0.0 > AT1G12440.1 | Symbols: | A20/AN1-like zinc finger family protein | chr1:4241592-4243008 REVERSE LENGTH=969 Length=969 Score = 1112 bits (602), Expect = 0.0 Identities = 698/744 (94%), Gaps = 8/744 (1%) Strand=Plus/Plus Query 1 TTTCAATTATGGGTTCTGAGCAAAACGACGGCACAAGCTTCTCTCCTTCAGAGCCAAAGC 60 |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 231 TTTCCATTATGGGTTCTGAGCAAAACGACAGCACAAGCTTCTCTCCTTCAGAGCCAAAGC 290 Query 61 TCTGCGTCAAAGGATGTGGCTTCTTCGGATCTCCATCGAACATGAACCTCTGCTCCAAAT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 291 TCTGCGTCAAAGGATGTGGCTTCTTCGGATCTCCATCGAACATGAACCTCTGCTCTAAAT 350 Query 121 GCTACCGAGACATCCGAGCTACGGAGGAACAAACCGCTTCGGCTAAAGCCGCCGTGGAGA 180 ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct 351 GCTACAGAGACATCCGAGCCACGGAGGAACAAACCGCTTCCGCTAAAGCCGCCGTCGAGA 410 Query 181 AATCTCTAAACCCTAACAAACCCAAAA-TCCAACCACAACAGAGCCAAGAAACCACTCAA 239 |||||||||||||||| |||||||||| || ||||||||||||||||||||| ||||||| Sbjct 411 AATCTCTAAACCCTAATAAACCCAAAACTC-AACCACAACAGAGCCAAGAAATCACTCAA 469 Query 240 GGCGTCCTCGAATCTGGATCTTCTTCCTCATCAACAACGAGCGGTGGTGATTCGGCTGCA 299 |||||||||| ||||||||| |||||||||||||| | ||| || |||||||||||||| Sbjct 470 GGCGTCCTCGGATCTGGATCGTCTTCCTCATCAACGA-GAG-GG-GGTGATTCGGCTGCT 526 Query 300 GCTCCTTTGGATCCACCGAAATCGACGGCTACGAGATGCTTGAGCTGTAACAAGAAAGTG 359 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 GCTCCGTTGGATCCACCGAAATCGACGGCTACGAGATGCTTGAGCTGTAACAAGAAAGTT 586 Query 360 GGCGTGACGGGTTTCAAGTGTAAGTGTGGGAGCACTTTCTGTGGAACTCATAGATATCCA 419 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 587 GGCGTGACGGGTTTCAAGTGTAGGTGTGGAAGCACTTTCTGTGGAACTCATAGATATCCA 646 Query 420 GAGACTCATGAGTGCGAATTCGATTTCAAAGGAGTCGCGAGAGAAGCCATTGCTAAGGCT 479 |||| ||| |||||| ||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct 647 GAGAGTCACGAGTGCCAATTCGATTTCAAAGGAGTTGCGAGAGAAGCTATTGCTAAAGCT 706 Query 480 AATCCTGTGGTGAAGGCTGATAAGGTTGAGAGGATATGAATTGGTGAAGAAACTGGTGTG 539 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct 707 AATCCTGTGGTGAAGGCTGATAAGGTTGATAGGATATGAATTGGTGAAGAAACTGTTGTG 766 Query 540 TTCTCTTTGtttttttttATATTAAAGTCTCGTGATGTTGGTGGTTTGGCTCT-T-TTTT 597 |||||||| | ||||||||| || ||||||||||||||||||||||||||||| | |||| Sbjct 767 TTCTCTTT-TGTTTTTTTATTTTCAAGTCTCGTGATGTTGGTGGTTTGGCTCTCTGTTTT 825 Query 598 CTGCTCTTATTATGGTTTGATTTGCTTTTAGGGTTTCTTAGAAAAGGTTTTCGATTCTGC 657 |||||||||||||||||| |||||||||||||||||||||| ||||| || |||||||| Sbjct 826 CTGCTCTTATTATGGTTTTATTTGCTTTTAGGGTTTCTTAGGAAAGGCCTTAGATTCTGC 885 Query 658 TATTATGTGGTTTCATGATTTGCAACATTGGATTTGTTGTTCTGTAATAAATTGTTGGTC 717 ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 886 TATTATGTGGTTTCATGTTTTGCAACATTGGATTTGTTGTTCTGTAATAAAGTGTTGGTT 945 Query 718 ATATCATAAAATTGTGTTCTTATT 741 |||| || |||||||||||||||| Sbjct 946 ATATTATGAAATTGTGTTCTTATT 969 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35967649252 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5