BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471648 Length=1326 Score E Sequences producing significant alignments: (Bits) Value AT1G14685.3 | Symbols: BPC2, BBR/BPC2, ATBPC2 | basic pentacyst... 1736 0.0 AT2G01930.1 | Symbols: BPC1, BBR, ATBPC1 | basic pentacysteine1... 307 2e-82 > AT1G14685.3 | Symbols: BPC2, BBR/BPC2, ATBPC2 | basic pentacysteine 2 | chr1:5042588-5044294 FORWARD LENGTH=1707 Length=1707 Score = 1736 bits (940), Expect = 0.0 Identities = 1079/1142 (94%), Gaps = 26/1142 (2%) Strand=Plus/Plus Query 206 TAGATCTTTGAAATGGATGACGATGGGTTTCGCAATTGGGGTTACTATGAACCAGCGGCT 265 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 487 TAGATCTTTGAAATGGATGACGATGGGTTTCGTAATTGGGGTTACTATGAACCAGCTGCT 546 Query 266 GCTACCTTTAAAGGTAATCTCGGTTTGCAGCTTATGTCTACCATTGATCGGAACACTAAA 325 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 547 GCTACCTTTAAAGGTAATCTCGGTTTGCAGCTAATGTCTACCATTGATCGGAACACTAAA 606 Query 326 CCGTTTTTACCTGGCCGTGACCCGAATCTAATGATCGGGCCTAATGGGTCATATCACCAC 385 |||||||||||||| || || |||||||||||||| |||||||| ||||||||||||||| Sbjct 607 CCGTTTTTACCTGGGCGGGATCCGAATCTAATGATGGGGCCTAACGGGTCATATCACCAC 666 Query 386 CAAGAGCCTCCTATCCACATGAGCTACAATTGGATTAACCAACAGAAGGATAAGTTCTTC 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 667 CAAGAGCCTCCTATCCACATGAGCTACAATTGGATTAACCAACAGAAGGATAAGTTCTTC 726 Query 446 AATATGTTGCCTGTTAC-A-A-CCGCTCCTAATTACGGTAATGTCCTTCCCGAAACTTCG 502 ||||||||||||||||| | | || ||||||| ||||||||||||||||||||||||||| Sbjct 727 AATATGTTGCCTGTTACAACAGCCACTCCTAACTACGGTAATGTCCTTCCCGAAACTTCG 786 Query 503 TCTGCCCCGTCGATGCAGATGAACCTCCATCATCATCATCAAACCGAGGAGACCCCGGTT 562 ||||| ||||||||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct 787 TCTGCTCCGTCGATGCAGATGAATCTCCATCATCATCTTCAAACCGAGGAGAATCCGGTT 846 Query 563 AAATTGGAAGAAGAGATTGTTGTTCAGACTAAGAAGAGAAAGACCAATGCAAAAGCTGGC 622 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 847 AAGTTGGAAGAAGAGATTGTTGTTCAGACTAAGAAGAGAAAGACCAATGCAAAAGCTGGC 906 Query 623 TCCACAGCAAAGGCTAAGAAGCCAAGGAAACCAAAGGATGAGAACAG---caacaacaac 679 || || |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 907 TCGACTCCAAAGGCTAAGAAGCCAAGGAAACCAAAGGATGAGAACAGTAACAACAACAAC 966 Query 680 aacaacaacaCGAATGTTTCTCGAGTGAAACCGGCTAAGAAAAGTGTCGATTTGGTGATT 739 |||||||||||||||||| ||||||| ||||| |||||||||||||| || |||||||| Sbjct 967 AACAACAACACGAATGTTACTCGAGTTAAACCCGCTAAGAAAAGTGTTGACTTGGTGATC 1026 Query 740 AATGGAGTGAGTATGGACATTTCGGGTCTTCCTGTCCCGATCTGCACTTGCACTGGAGCT 799 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1027 AATGGAGTGAGTATGGACATTTCGGGTCTTCCTGTTCCTATCTGCACTTGCACTGGAGCT 1086 Query 800 CCTCAGCAATGCTACCGTTGGGGATGTGGCGGTTGGCAGTCTGCGTGTTGTACCACAAAC 859 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1087 CCTCAGCAATGCTACCGTTGGGGATGTGGCGGTTGGCAGTCTGCTTGTTGTACCACAAAC 1146 Query 860 ATCTCGATGCATCCATTGCCAATGAGTACTAAACGCCGTGGAGCGAGGATCTCCGGAAGG 919 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 1147 ATCTCAATGCATCCATTACCAATGAGTACTAAACGCCGTGGAGCGAGGATCTCGGGAAGG 1206 Query 920 AAGATGAGTCAAGGCGCGTTTAAGAAGGTTCTTGAGAAACTAGCTTCTGATGGGTTTAAC 979 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1207 AAGATGAGTCAAGGCGCGTTTAAGAAGGTTCTTGAGAAACTTGCTTCTGATGGGTTTAAC 1266 Query 980 TTTGGGAATCCGATTGATCTTAAGAGCCATTGGGCAAGACATGGAACTAACAAGTTCGTC 1039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1267 TTTGGGAATCCGATTGATCTTAAGAGCCATTGGGCAAGACATGGAACTAACAAGTTCGTC 1326 Query 1040 ACAATCAGATGATTAGTTGCTTGATTAGTAAAAAAGAAGAAGTGAGTGTTTCTCTTCCGG 1099 ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 1327 ACAATCAGATGATTAGTTGCTTGATTAGTAAAACAGAACAAGTGAGTGTTTCTCTTCCGG 1386 Query 1100 GATGGAATCTCTCAATGATGGTGTATGTATATATACAACAAATCT----TCTGTGACCTT 1155 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 1387 GATGGAATCTCTCAATGATGGTGTATGTATATA--CAACAAATCTGAAATCTGTGACCTT 1444 Query 1156 TTTCAAAA-TTCTGTCTGCAATCTGAGTTCGATTCTGTTTTCAGGTAAAACCATCTTCGT 1214 || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1445 TT-CAAAAATTCTGTCTGCAATCTGAGTTCGATTCTGTTTTCAGGTAAA-CCATCTTCGT 1502 Query 1215 TGTAGGGTTTGGAAACAGAGTTCTCtgtttttctt-accacttttt---atcatacgtt- 1269 |||||||||||||| |||||||||||||||| ||| |||||||||| |||| || || Sbjct 1503 TGTAGGGTTTGGAAGCAGAGTTCTCTGTTTT-CTTTACCACTTTTTTTTATCACACTTTT 1561 Query 1270 gctttgttttttgtttgtttgtCTATCTGTGT--CTGAGGAAGAA-A-G-TGTCTGAGAA 1324 |||||||||||||||||||||||||||||||| ||||||||||| | | |||||||||| Sbjct 1562 GCTTTGTTTTTTGTTTGTTTGTCTATCTGTGTGTCTGAGGAAGAAGAAGGTGTCTGAGAA 1621 Query 1325 AA 1326 || Sbjct 1622 AA 1623 > AT2G01930.1 | Symbols: BPC1, BBR, ATBPC1 | basic pentacysteine1 | chr2:427121-428839 REVERSE LENGTH=1237 Length=1237 Score = 307 bits (166), Expect = 2e-82 Identities = 291/351 (83%), Gaps = 10/351 (3%) Strand=Plus/Plus Query 704 GTGAAACCGGCTAAGAAAAGTGTCGAT-TTGGTGATTAATGGAGTGAGTATGGACATTTC 762 |||||||||| |||||| ||||| ||| || |||||||| || ||||||||||||||||| Sbjct 653 GTGAAACCGGTTAAGAAGAGTGTTGATCTT-GTGATTAACGGTGTGAGTATGGACATTTC 711 Query 763 GGGTCTT-CCTGTCCCGATCTGCACTTGCACTGGAGCTCCTCAGCAATGCTACCGTTGGG 821 ||| || ||||| ||| | || ||||| |||||| ||||||| ||||| |||||||||| Sbjct 712 TGGT-TTACCTGTACCGGTTTGTACTTGTACTGGAACTCCTCAACAATGTTACCGTTGGG 770 Query 822 GATGTGGCGGTTGGCAGTCTGCGTGTTGTACCACAAACATCTCGATGCATCCATTGCCAA 881 | || ||||| ||||| || || |||||||| || ||||| ||| || ||||||| || | Sbjct 771 GTTGCGGCGGATGGCAATCCGCTTGTTGTACGACTAACATTTCGGTGTATCCATTACCGA 830 Query 882 TGAGTACTAAACGCCGTGGAGCGAGGATCTCCGGAAGGAAGATGAGTCAAGGCGCGTTTA 941 |||||||||| || || || || ||||| || || ||||||||||||||||||||||||| Sbjct 831 TGAGTACTAAGCGACGCGGTGCAAGGATTTCGGGTAGGAAGATGAGTCAAGGCGCGTTTA 890 Query 942 AGAAGGTTCTTGAGAAACTAGCTTCTGATGGGTT-TAACTTTGGGAATCCGATTGATCTT 1000 |||||||||||||||| || | | || || || || |||||||||| |||||||| || Sbjct 891 AGAAGGTTCTTGAGAAGTTATCAACAGAAGG-TTATAGCTTTGGGAATGCGATTGAT-TT 948 Query 1001 -AAGAGC-CATTGGGCAAGACATGGAACTAACAAGTTCGTCACAATCAGAT 1049 ||| | |||||||| ||||||||||| || ||||| ||||| ||||||| Sbjct 949 GAAGT-CTCATTGGGCTAGACATGGAACCAATAAGTTTGTCACGATCAGAT 998 Score = 246 bits (133), Expect = 3e-64 Identities = 313/394 (79%), Gaps = 36/394 (9%) Strand=Plus/Plus Query 75 ttctctctcctctctcttcccctc-ctc-ttctctttccccaatctctctcaggtttctc 132 |||||| ||||||||||| | || || |||||||| | |||||||||||||||||||| Sbjct 20 TTCTCTTTCCTCTCTCTT-CTATCTTTCTTTCTCTTT-CTCAATCTCTCTCAGGTTTCTC 77 Query 133 tttcctctctcACCAGAAGGGCaaaaaaaTTCCCTTAAAGAGTCCCCCGTTTTTG-TTTA 191 | |||||||| |||| ||| | |||||||| | |||||||| ||| ||| | | Sbjct 78 TCTCCTCTCT--CCAGGAGGTC-AAAAAATT-CTTTAAAGAG----CCG-TTTAGACCAA 128 Query 192 ACCCCTCTTCTCATTAGATCTTTGAAATGGATGACGATGGGTTTCGCAATTGGGGTTACT 251 |||| | || | | || ||| | |||||| || ||||| |||||||||||||| |||| Sbjct 129 ACCCAT-TT-TTA-TA-ATC-AT-CAATGGACGATGATGGATTTCGCAATTGGGGATACT 182 Query 252 ATGAACCAGCGGCTGCTAC--C-TTTAAAGGTAATCTCGGTTTGCAGCTTATGTCTACCA 308 ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||| | Sbjct 183 ATGAACCAGCGGCTGCTTCTTCGTTTAAAGGTAATCTCGGTTTGCAGCTTATGTCTACTA 242 Query 309 TTGATCGGAACACTAAACCGTTTTTACCTGGCCGTGACCCGAATCTAATGATCGGGCCTA 368 |||| ||||||||||||||||||||||| || ||||| ||||||| |||||||| ||| Sbjct 243 TTGACCGGAACACTAAACCGTTTTTACCCGGTCGTGAATCGAATCTTATGATCGGTTCTA 302 Query 369 ATGGGTCATATCAC-CACCAAGAGCCTCCTATCCACATGAGCTACAATTGGATTAACCAA 427 | || || |||||| | | | |||| | |||||| ||| | |||||||| ||| Sbjct 303 ACGGTTCGTATCACTCTCGA-GAGCA----AG--ACATGAACTATAGCTGGATTAATCAA 355 Query 428 C-AGAAGGATAA---GTTCTTCAATATGTTGCCT 457 | | ||||| || ||||||||| ||||||||| Sbjct 356 CCA-AAGGACAACAAGTTCTTCAACATGTTGCCT 388 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65260708500 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5