BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471694 Length=1398 Score E Sequences producing significant alignments: (Bits) Value AT1G15040.1 | Symbols: | Class I glutamine amidotransferase-li... 2050 0.0 AT5G38200.1 | Symbols: | Class I glutamine amidotransferase-li... 159 5e-38 > AT1G15040.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr1:5179887-5181389 REVERSE LENGTH=1413 Length=1413 Score = 2050 bits (1110), Expect = 0.0 Identities = 1307/1403 (93%), Gaps = 9/1403 (1%) Strand=Plus/Plus Query 1 Caaataagaaagagagaattaagacataaacaagac-aaa-aagaaaaagagaattaaaa 58 ||| |||||||||||| ||||||||||||||||||| ||| ||||| ||||| ||| | Sbjct 4 CAATTAAGAAAGAGAGGATTAAGACATAAACAAGACAAAACAAGAAGAAGAG-ATT-TAT 61 Query 59 ttagtacataaaaatGGTGGTCGCTAATGATCTCTCGCCCAAGATTCACCCCAGAGTTCT 118 ||| |||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||| Sbjct 62 TTATTACATAAAAATGGTTGTCGCCAATGATCTCTCGTCCAAGATTCTCCCCAGAGTTCT 121 Query 119 CATCGTCTCTCGTCGGACTCTCCGTAAGAACAAGTACGTGGACTTCGTAGGAGAATACCA 178 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 122 CATCGTCTCTCGTCGGACTCTCCGCAAGAACAAGTACGTGGACTTCGTAGGAGAATACCA 181 Query 179 TCTCGATCTCATTGTCTCCTCCGGTGCCGTCCCTGTCATCGTGCCTCGTGTCAATGGGAT 238 |||||||||||| |||||||||||||||||||||||||| || || |||||||||||||| Sbjct 182 TCTCGATCTCATCGTCTCCTCCGGTGCCGTCCCTGTCATTGTCCCACGTGTCAATGGGAT 241 Query 239 CCATTCTATGCTCCAGAGCTTCGAGCCCATCCATGGCGTCCTTCTCTGCGAAGGAGAAGA 298 ||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||| Sbjct 242 CCATTCTATGCTCCAGAGCTTCGAGCCTATTCATGGTGTCCTCCTCTGCGAAGGAGAAGA 301 Query 299 TGTAGATCCTTCTCTCTATGCCGACGCA-GAATCCTCAGGTCTCTCACCGGAAGACATGG 357 ||| |||||||||||||| || |||| | |||| |||| ||||| || |||||||||| Sbjct 302 TGTCGATCCTTCTCTCTACGCGGACG-ATGAATTATCAGACCTCTCGCCAGAAGACATGG 360 Query 358 AGGAGATCAAGAAGGTGCATGCAGGGGACATGACCATCGACCGAGAGAAAGACAGCATTG 417 ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 361 AGGAGATTAAGAAGGCGCATGCAGAGGACATGACCATCGACCGAGAGAAAGACAGCATTG 420 Query 418 AACTGACCCTAGCTAGACTCTGTCTTGAAAGAAACATTCCTTTCTTAGGCATTTGTCGTG 477 | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 421 AGCTGACTCTAGCTAGACTCTGTCTCGAAAGAAACATTCCTTTCTTAGGCATTTGTCGTG 480 Query 478 GCTCTCAGATTCTCAACGTTGCCGCAGGTGGAACTCTTTACCAAGACATCGACAAAGAAC 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 GCTCTCAGATTCTCAACGTTGCCGCAGGTGGAACTCTTTACCAAGACATCGACAAAGAAC 540 Query 538 TCGGAACTACAACAACGACGACTAAGCATATAGATTATGACAACTACGATGGGCACAGGC 597 |||||||||| | || ||||| || |||||||||||||||||||||||||||||||| | Sbjct 541 TCGGAACTACGATGACAACGACAAATCATATAGATTATGACAACTACGATGGGCACAGAC 600 Query 598 ACGAGGCTAGAATCGTGGAGGAGACGCCGTTGCATACGCTGTTCAAGGAGATGGAGATAA 657 ||||||||||||||||||||||||| ||||| |||| | ||||| ||||||||||||||| Sbjct 601 ACGAGGCTAGAATCGTGGAGGAGACTCCGTTACATAAGTTGTTCGAGGAGATGGAGATAA 660 Query 658 TGGTGAACTCGTATCACCATCAAGGTGTGAAGAGACTGGCGCAACGTTTTGCGCCCATGG 717 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| Sbjct 661 TGGTGAACTCGTATCACCATCAAGGTGTGAAGAGACTGGCTCAACGTTTTGTGCCGATGG 720 Query 718 CTTACGCTCCTGATGGTTTGATTGAAGGATTTTATGATCCGAATCGCTATGATCCAAAGG 777 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 721 CTTATGCTCCTGATGGTTTGATTGAAGGATTTTATGATCCGAATCGATATGATCCAAAGG 780 Query 778 AAGGTCAATTCTTGATGGGTCTGCAGTTTCATCCCGAGAGGATGAGGCTTTCGGGCTCTG 837 ||||||| |||||||||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct 781 AAGGTCAGTTCTTGATGGGTCTGCAGTTTCATCCAGAGAGGATGAGGCTTCCAGGCTCTG 840 Query 838 ATGAGTTTGATTATCCAGGCTGCGCTTTAGTTTATCAGGAGTTTGTGAAAGCTGTGATCG 897 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 ATGAGTTTGATTATCCAGGCTGCGCTTTAGTTTATCAGGAGTTTGTGAAAGCTGTGATCG 900 Query 898 CATTTCAGAAGAAACAAGTAAACGCAACACAGATGGAGATGAAGAGAAAGACAACGACGC 957 |||||||||||||||||||||||||||||||| | ||||||||||| ||||| || || | Sbjct 901 CATTTCAGAAGAAACAAGTAAACGCAACACAGGTTGAGATGAAGAGGAAGACCACCACAC 960 Query 958 TCGTCAAAAGCTTCTCCCAAGCCGAGTTTCTAGAGGTTAATACGGTTCTAAGCAAGCAAC 1017 |||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct 961 TCGTCAAAAGCTTCTCCCAAGCTGAGTTTCTAGAGGCTAATACAGTTCTAAGCAAGCAAC 1020 Query 1018 AAGAGAATAGGCTGAAGCAGATGGGAGCGACGGTGAGGAACTCATGTGTGTATATGAAAC 1077 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 AAGAGAATAGGCTGAAGCAGATGGGAGCGACGGTGAGGAACTCATGTGTGTATATGAAAA 1080 Query 1078 GGATGAAAAGGAAAGAGGAGCAGGAGAGAGCAATGGACAAATTTTCCGCGGAGCGGTTGT 1137 ||||||||| ||||||||| || |||||||||||||||||| |||| ||||||||| ||| Sbjct 1081 GGATGAAAATGAAAGAGGAACAAGAGAGAGCAATGGACAAACTTTCGGCGGAGCGGCTGT 1140 Query 1138 CTGATCTGCTTTCCTTCCACCATATGATGGCTCGTCTTTGCTCCGATGCCATCAAGAGGA 1197 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 1141 CTGATATGCTTTCCTTCCACCATATGATGGCTCGTCTTTGCTCCAATGCCATCAAGAGAA 1200 Query 1198 AACTACTAGAACCCGAAGC-CACAGATAGGACCATTGAATCCTCtttttttCTCAACTAT 1256 ||||||||||||||||| | ||||||||||||||| || ||||| ||||||||||||||| Sbjct 1201 AACTACTAGAACCCGAA-CACACAGATAGGACCATAGAGTCCTCCTTTTTTCTCAACTAT 1259 Query 1257 TAGCTTTTATTGCAAAAACAGTGTTACACATAATAAGAAAACTAGCATTCCGTGCACTTA 1316 |||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||| | ||| Sbjct 1260 TAGCCTTTATTGCAAAAACAGTTTTACACACAATAAGAAAACTAGCATTCTGTGAATTTA 1319 Query 1317 CAGAAGCTACCAACTGAAAA-CTTTTGACGGTATCCTATATGTATGGTTTCCTCAGGACA 1375 ||||||||||||| |||||| |||||||| |||||||||||||| |||||||||| |||| Sbjct 1320 CAGAAGCTACCAAATGAAAAACTTTTGACAGTATCCTATATGTAAGGTTTCCTCAAGACA 1379 Query 1376 GTAATCATAAAGAGTTCCTTTTT 1398 ||||||||||||||||||||||| Sbjct 1380 GTAATCATAAAGAGTTCCTTTTT 1402 > AT5G38200.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr5:15256276-15258755 FORWARD LENGTH=1699 Length=1699 Score = 159 bits (86), Expect = 5e-38 Identities = 212/271 (78%), Gaps = 16/271 (6%) Strand=Plus/Plus Query 648 ATGGAGATAATGGTGAACTCG-TATCACCATCAAGGTGTGAAGAGACTGGCGCAACGTTT 706 |||||||| |||| || | | ||||||||||||||||||||||||||||| ||| | || Sbjct 723 ATGGAGATTTTGGTTAA-TAGTTATCACCATCAAGGTGTGAAGAGACTGGCACAAAGATT 781 Query 707 TGCGCCCATGGCTTACGCTCCTGATGGTTTGATTGAAGGATTTTATGATCCGAAT-CGCT 765 || ||| ||||||| ||| ||||||| || || ||||| ||||| |||||| || || | Sbjct 782 TGTGCCAATGGCTTTTGCTGCTGATGGGTTAATGGAAGGTTTTTACGATCCGGATGCG-T 840 Query 766 ATGATCCA-AAGGAAGGTCAA-TTCTTGATGGGTCTGCAGTTTCATCCCGAGAGGATGAG 823 || |||| ||| |||| || ||| | |||||| | ||||||||||| ||||| ||||| Sbjct 841 ATAATCCTGAAG-AAGGG-AAGTTCATAATGGGTTTACAGTTTCATCCAGAGAGAATGAG 898 Query 824 GCTTTCGGGCTCT-GATGAGTTTGATTATCCAGGCTG-CGCTT-TAGTTTATCAGGAGTT 880 | | | ||| ||||||||||||||||| || || | || | | |||||||||||| Sbjct 899 ACAA-CATGATCTTGATGAGTTTGATTATCCTGGTTGTC-CTGCT-GCTTATCAGGAGTT 955 Query 881 TGTGAAAG-CTGTGATCGCATTTCAGAAGAA 910 || |||| | ||||| || | |||||||| Sbjct 956 TGC-AAAGGCGGTGATTGCGTACCAGAAGAA 985 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68875147740 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5