BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471829 Length=1104 Score E Sequences producing significant alignments: (Bits) Value AT1G16320.1 | Symbols: | Uncharacterized conserved protein (DU... 1748 0.0 > AT1G16320.1 | Symbols: | Uncharacterized conserved protein (DUF2358) | chr1:5580855-5582143 FORWARD LENGTH=1129 Length=1129 Score = 1748 bits (946), Expect = 0.0 Identities = 1057/1110 (95%), Gaps = 10/1110 (1%) Strand=Plus/Plus Query 1 ATTTCTCTGGCTCAGAATCGTCGCCATGAAAATGT-AAGAAGAAACAAAGACGAGCTCTC 59 |||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||| Sbjct 24 ATTTCTCTGGCTCAGAATCGACGCCATGGAAATGTAAAGAAGAAACAAAGACGAGCTCTC 83 Query 60 AAACCCAGAAGCCATGGCTTTTCTTCTTCCTAATCTATCATCTCCCTCAATCCATCTTCA 119 ||| |||| ||| ||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 84 AAATCCAGCAGCAATGGCTTTTCTTCTTTCTAATCTATCATCTCCGTCAATCCATCTTCA 143 Query 120 AACCGGAAAATACCCAAACCTTAAACCCATTTTCAGTCAATCTCTATCGTCGTCGTCGTC 179 ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 144 AACCGGAAAATACCCAAACCTTAAACCCATTTTCAGTCAATCTCTATCGTC-T--TCGTC 200 Query 180 TTCTGTTAGCTACGAATTCGTGGAAGATAATATATCGACACACTCTCTTTTGAGCATCCA 239 |||||||||||||||||| || ||||| ||| |||| |||| |||||| ||||||||||| Sbjct 201 TTCTGTTAGCTACGAATTTGTAGAAGAGAATCTATCTACACTCTCTCTATTGAGCATCCA 260 Query 240 GTCTCCTCCTCTTAAAGACACGCAGGTTCAGACAAGACACAGTTCGCAAGATAAGCATAA 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 261 GTCTCCTCCTCTTAAAGACACGCAAGTTCAGACAAGACACAGTTCGCAAGATAAGCATAA 320 Query 300 TAACCACGACAGAGATGAATTCTATATCAATCTTGGTGTCGCTGTCCGTACGCTTCGTGA 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 321 TAACCACGACAGAGATGAATTCTATATCAATCTTGGTGTCGCTGTCCGTACACTTCGTGA 380 Query 360 AGATTTGCCTTTGCTCTTCACTAGAGACCTTAATTACGACATCTACAGGGATGATATAAC 419 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 381 AGATTTGCCTTTGCTCTTCACTAGAGATCTTAATTACGACATCTACAGGGATGATATAAC 440 Query 420 ATTTGTGGATCCGATGAACACATTTACTGGGATTGAAAACTACAA-ATTGATCTTCTGGG 478 |||||||||||||||||||||||| |||||||| || |||||||| ||| |||||||||| Sbjct 441 ATTTGTGGATCCGATGAACACATTCACTGGGATGGACAACTACAAGATT-ATCTTCTGGG 499 Query 479 CACTCAGATTTCATGGGAAGATATTGTTCAGAGATATCTCACTTGAGATCTTCAGGGTAT 538 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 500 CACTCAGATTTCATGGGAAGATATTGTTCAGAGATATCTCACTTGAGATCTTCAGAGTAT 559 Query 539 GGCAACCATCAGAGAACATGATTCTTATCAGGTGGAATCTCAAGGGTGTGCCTAGAGTTC 598 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 560 GGCAACCATCAGAGAACATGATTCTCATCAGGTGGAATCTCAAGGGTGTGCCTAGAGTTC 619 Query 599 CATGGGAAGCTAAAGGAGAGTTTCAAGGCACTTCTCGGTATAAACTCGACCGTAATGGCA 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 620 CATGGGAAGCTAAAGGAGAGTTTCAAGGCACTTCTCGGTATAAACTCGACCGTAATGGCA 679 Query 659 AAATCTATGAGCATAAAGTCGATAACTTGGCCTTCAATTTCCCTCAACAGCTCAAACCTG 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 680 AAATCTATGAGCATAAAGTCGATAACTTGGCCTTCAATTTCCCTCAACAGCTCAAACCTG 739 Query 719 CAGCTTCGGTTTTGGATTTGGTGACTGCTTCCCCTGCAAGTAGTCCCAATCCAACGTTCT 778 |||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct 740 CAGCTTCGGTTTTGGATTTGGTGACTGCTTCCCCTGCAAGCAGTCCTAATCCTACGTTCT 799 Query 779 TTTTCGGTCCTGTGGACTCTTATTCATCTTCATGGACTAAGTTTTATCAAGCGGTGAGAG 838 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 800 TTTTCAGTCCTGTGGACTCTTATTCATCTTCATGGGTTAAGTTTTATCAAGCGGTGAGAG 859 Query 839 GGACATTGGAGACAGAGGATATCTTTGTGACA---GACAGTTTACTCACATGCTCATAGT 895 |||||||||||||||||||||| ||||| ||| ||| ||||| ||||||||||||||| Sbjct 860 GGACATTGGAGACAGAGGATATGTTTGTAACAACAGACTGTTTAGTCACATGCTCATAGT 919 Query 896 GGAAGTAGAGTTGTTATACACATACTCAAGGTCACACTTCTCAGGTGTATATAGTTTT-A 954 ||||||||||||| ||| | | ||||||||||||||||||||||||||||||||||| | Sbjct 920 GGAAGTAGAGTTGCGATATAGACACTCAAGGTCACACTTCTCAGGTGTATATAGTTTTTA 979 Query 955 CATTGAAGGTTTTATATATATGAGTAGATCTGGTTGACTTAATTCTTGGGAAACCTAGAA 1014 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 980 CATTAAAGGTTTCATATATATGAGTAGATCTGGTTGACTTAATTCTTGGGAAACCTAGAA 1039 Query 1015 CTGTTATGTTGTTCCAAAAGCTTTATACAACGTAATCAATACAATGAACTTTTGTCTTTA 1074 |||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| Sbjct 1040 TTGTTATGTTGTTCCAAAAGCTTTATACAACGTTATCAATACAATGGAGTTTTGTCTTTA 1099 Query 1075 TGATTATGTGAAACAGTAATATTACTCAGT 1104 |||||||||||||||||||||||||||||| Sbjct 1100 TGATTATGTGAAACAGTAATATTACTCAGT 1129 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54116187510 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5