BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471997 Length=2838 Score E Sequences producing significant alignments: (Bits) Value AT1G17840.1 | Symbols: WBC11, ABCG11, DSO, COF1, ATWBC11 | whit... 4503 0.0 AT1G17850.2 | Symbols: | Rhodanese/Cell cycle control phosphat... 573 3e-162 > AT1G17840.1 | Symbols: WBC11, ABCG11, DSO, COF1, ATWBC11 | white-brown complex homolog protein 11 | chr1:6142564-6146521 FORWARD LENGTH=3045 Length=3045 Score = 4503 bits (2438), Expect = 0.0 Identities = 2747/2888 (95%), Gaps = 54/2888 (2%) Strand=Plus/Plus Query 1 AAAAGAGAAACAACCAAAAAGAAACAAGGAGAAGTGTTTGTTCTGTTTCAGTCATCCAAG 60 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| Sbjct 8 AAAAGAGAAACAACCAAAAAGAAAGAAGAAGAAGTGTTTGTTCTGTTTCAGTCATTCAAG 67 Query 61 TTCATGAGAATAAAAACGAGTCCAAGTTTGTTGTTCATGCAAAATTCTCATGACTCTCTT 120 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 68 TTCATGAGAATAGAAACGAGTCCAAGTTTGTTGTTCATGCAAAATTCTCATGACTCTGTT 127 Query 121 ACACTCCTGAATTTCTTCTACTTAAATTTCACTCAATAAC-TTTATTTTTCTATCAGTTC 179 |||||||||||||||||||||||| ||| || |||||||| ||| || |||||||||||| Sbjct 128 ACACTCCTGAATTTCTTCTACTTATATTCCATTCAATAACTTTTCTTCTTCTATCAGTTC 187 Query 180 AACGTT--CACACTTTTTCCATTTCCTCGACAAACTCCttttttt-tctca--------g 228 |||||| ||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 188 AACGTTCACACACTTTTTCCATTTCCTCGACAAACTCCTTTTTTTCTCTCACTTTTCTCG 247 Query 229 -attc--------ttttttt-t-t-----AAACAAAAATCCTCTGTTTCGGTTTAAGAGA 272 |||| ||||||| | | ||||| ||||||||||||| ||||||||||| Sbjct 248 AATTCTTTTTTTTTTTTTTTCTCTCAACGAAACATAAATCCTCTGTTTTGGTTTAAGAGA 307 Query 273 TGGAGATAGAAGCAAGCAGACAGCAAACCACCGTACCGGTTTCAGTCGGCGGAGGGAATT 332 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 308 TGGAGATAGAAGCAAGCAGACAACAAACCACCGTACCGGTTTCAGTCGGCGGTGGGAATT 367 Query 333 TTCCGGTTGGTGGGTTAAGTCCGTTGAGTGAAGCTATATGGAGAGAGAAAGCTCCAACGG 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 368 TTCCGGTTGGTGGGTTAAGTCCGTTGAGTGAAGCTATATGGAGAGAGAAAGCTCCAACGG 427 Query 393 AGTTCGTCGGAGACGTGTCAGCGAGGCTCACGTGGCAAGATCTGACGGTGATGGTGACTA 452 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 428 AGTTTGTCGGAGACGTGTCAGCGAGGCTTACGTGGCAAGATCTGACGGTGATGGTGACTA 487 Query 453 TGGGAGATGGTGAGACTCAAAATGTTCTTGAAGGTCTTACCGGTTACGCTGAACCGGGAT 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 488 TGGGAGATGGTGAGACTCAAAATGTTCTTGAAGGTCTTACCGGTTACGCTGAACCGGGAT 547 Query 513 CTCTCACGGCTCTCATGGGTCCTTCCGGCTCTGGAAAATCAACTATGCTCGACGC-TCTA 571 ||||||||||||||||||| ||||||||||| || ||||| |||||||||||||| | || Sbjct 548 CTCTCACGGCTCTCATGGGCCCTTCCGGCTCCGGGAAATCTACTATGCTCGACGCAT-TA 606 Query 572 GCTAGCCGCCTCGCCGCTAACGCTTTTCTCTCCGGCACCGTTCTTCTTAACGGCCGCAAA 631 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 607 GCTAGCCGCCTCGCTGCTAACGCTTTTCTCTCCGGCACCGTTCTTCTTAACGGCCGCAAA 666 Query 632 ACCAAACTCTCCTTTGGAACAGCTGCGTATGTGACACAAGACGATAACTTGATTGGGACG 691 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct 667 ACCAAACTCTCCTTTGGAACAGCTGCATATGTGACCCAAGACGATAACTTGATTGGTACG 726 Query 692 TTAACTGTGAGAGAGACGATTTGGTATTCAGCGAGAGTTCGTCTTCCGGACAAGATGTTA 751 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 727 TTAACTGTGAGAGAGACGATTTGGTATTCAGCGAGAGTTCGTCTTCCGGACAAGATGTTA 786 Query 752 CGGTCGGAGAAGCGTGCTCTTGTGGAGAGGACAATAATAGAGATGGGTCTTCAGGATTGT 811 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 787 CGGTCGGAGAAGCGTGCTCTAGTGGAAAGGACAATAATAGAGATGGGTCTTCAGGATTGT 846 Query 812 GCAGATACTGTTATAGGAAATTGGCATTTGCGTGGAATTAGTGGTGGAGAGAAGAGAAGA 871 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 847 GCAGATACTGTCATAGGAAATTGGCATTTGCGTGGAATTAGTGGTGGAGAGAAGAGAAGA 906 Query 872 GTCAGTATTGCTCTTGAGATTCTAATGAGACCTCGTTTACTGTTTCTCGATGAGCCAACA 931 ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct 907 GTCAGTATTGCTCTTGAGATTTTAATGAGACCTCGTTTGCTGTTTCTCGATGAGCCAACA 966 Query 932 AGTGGTCTCGATAGTGCTTCTGCTTTCTTTGTGACTCAGACATTGCGTGCGCTATCACGA 991 |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 967 AGTGGTCTTGATAGTGCTTCTGCTTTCTTTGTGACTCAGACTTTGCGTGCTTTATCACGA 1026 Query 992 GATGGAAGGACGGTGATTGCATCGATCCATCAACCGAGCAGTGAGGTTTTCGAGTTGTTT 1051 ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| Sbjct 1027 GATGGAAGGACGGTGATAGCATCGATCCACCAACCGAGCAGTGAGGTTTTTGAGTTGTTT 1086 Query 1052 GATCGGTTGTATCTGCTTTCTGGAGGCAAAACTGTTTACTTTGGTCAAGCTTCAGATGCA 1111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1087 GATCGGTTGTATCTGCTTTCTGGAGGCAAAACTGTTTACTTTGGTCAAGCTTCAGATGCA 1146 Query 1112 TATGAGTTCTTTGCACAAGCTGGGTTTCCATGTCCTGCGTTAAGGAACCCTTCTGATCAT 1171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1147 TATGAGTTCTTTGCACAAGCTGGGTTTCCATGTCCTGCGTTAAGGAACCCTTCTGATCAT 1206 Query 1172 TTCCTGAGATGCATAAACTCAGACTTTGACAAAGTTAGAGCCACTTTGAAAGGTTCTATG 1231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1207 TTCCTGAGATGCATAAACTCAGACTTTGACAAAGTTAGAGCCACTTTGAAAGGTTCTATG 1266 Query 1232 AAGCTAAGGTTTGAAGCAAGCGATGATCCGTTGGAAAAGATTACCACAGCCGAAGCTATT 1291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1267 AAGCTAAGGTTTGAAGCAAGCGATGATCCGTTGGAAAAGATTACCACAGCCGAAGCTATT 1326 Query 1292 AGAGTCTTGGTTGACTATTACCACACTTCTGATTACTACTACACAGCAAAGGCTAAGGTT 1351 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1327 AGACTATTGGTTGACTATTACCACACTTCTGATTACTACTACACAGCAAAGGCTAAGGTT 1386 Query 1352 GAGGAGATATCCCAATTTAAAGGGACTATTCTTGACTCTGGAGGCAGCCAGGCTAGTTTC 1411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1387 GAGGAGATATCCCAATTTAAAGGGACTATTCTTGACTCCGGAGGCAGCCAGGCTAGTTTC 1446 Query 1412 CTTCTGCAGACCTACACTTTAACAAAGCGATCCTTCATCAACATGTCAAGGGACTTTGGA 1471 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1447 CTTCTGCAGACCTACACTTTAACAAAGCGATCATTCATCAACATGTCAAGGGACTTTGGT 1506 Query 1472 TATTACTGGCTCAGACTGT-TAATTTACATCTTGGTCACAGTCTGCATCGGAACCATCTA 1530 ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| Sbjct 1507 TATTACTGGCTCAGACT-TCTAATTTACATCTTGGTCACAGTCTGCATTGGAACCATCTA 1565 Query 1531 TCTGAACGTTGGGACTAGCTACAGCGCCATTCTGGCACGGGGCTCATGTGCGTCTTTCGT 1590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1566 TCTGAACGTTGGGACTAGCTACAGCGCCATTCTGGCACGGGGCTCATGTGCGTCTTTCGT 1625 Query 1591 CTTTGGCTTTGTAACATTCATGTCAATTGGTGGATTTCCTTCGTTTGTTGAAGACATGAA 1650 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1626 CTTTGGCTTTGTAACATTCATGTCAATTGGTGGATTTCCTTCGTTCGTTGAAGACATGAA 1685 Query 1651 GGTCTTCCAAAGAGAGAGACTAAATGGGCACTATGGAGTAGCTGCGTTTGTGATAGCCAA 1710 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1686 GGTCTTCCAAAGAGAGAGACTAAACGGGCACTATGGAGTAGCTGCGTTTGTGATAGCCAA 1745 Query 1711 CACATTATCTGCAACGCCATTCCTTATCATGATAACTTTTATCTCCGGGACAATCTGTTA 1770 ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1746 CACATTATCTGCAACACCATTCCTGATCATGATAACTTTCATCTCCGGGACAATCTGTTA 1805 Query 1771 CTTCATGGTGGGTCTGCATCCAGGATTCACTCACTACCTCTTCTTTGTTCTCTGCCTCTA 1830 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1806 CTTCATGGTGGGTCTGCATCCAGGATTCACTCACTACCTCTTCTTTGTTCTCTGCCTCTA 1865 Query 1831 TGCAAGTGTCACCGTAGTAGAGAGCTTAATGATGGCGATAGCTAGCATTGTTCCCAACTT 1890 ||||||||||||||| || ||||||||||||||||| || ||||| |||||||||||||| Sbjct 1866 TGCAAGTGTCACCGTTGTGGAGAGCTTAATGATGGCAATTGCTAGTATTGTTCCCAACTT 1925 Query 1891 CCTAATGGGTATCATCATCGGAGCTGGAATCCAGGGGATCTTCATGCTGGTTTCTGGATT 1950 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1926 CCTCATGGGTATCATCATCGGAGCTGGAATCCAGGGGATCTTCATGCTGGTTTCTGGATT 1985 Query 1951 CTTCAGGCTTCCAAATGACATCCCAAAACCTTTCTGGCGTTATCCAATGTCATACATCAG 2010 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1986 CTTCAGGCTTCCAAATGACATCCCAAAACCTTTCTGGCGTTACCCAATGTCCTACATCAG 2045 Query 2011 CTTCCACTTCTGGGCTCTACAAGGTCAGTACCAGAATGATCTGAGAGGCTTGATGTTTGA 2070 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2046 CTTCCACTTCTGGGCTCTACAAGGTCAGTACCAGAATGATCTGAGAGGCTTGACGTTTGA 2105 Query 2071 CAGTCAGGGGAGTGCTTTCAAGATTCCGGGTGAATATGTTCTGGAGAACGTCTTCCAGAT 2130 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 2106 CAGCCAAGGGAGTGCTTTCAAGATTCCGGGTGAATATGTTCTTGAGAACGTCTTTCAGAT 2165 Query 2131 CGACCTGCACCGATCAAAATGGATTAACCTCAGTGTGATTCTTAGCATGATTATCATCTA 2190 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2166 CGACTTGCATCGATCAAAATGGATTAACCTCAGTGTGATTCTTAGCATGATTATCATCTA 2225 Query 2191 CCGCATCATCTTCTTCATCATGATTAAGACCAACGAGGATGTTACTCCTTGGGTCAGAGG 2250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2226 CCGCATCATCTTCTTCATCATGATTAAGACCAACGAGGATGTTACTCCTTGGGTCAGAGG 2285 Query 2251 TTACATAGCACGCAGAAGGATGAAGCAGAAGAATGGAACCCAGAACACCACAGTTGCACC 2310 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2286 TTACATAGCACGCAGAAGGATGAAGCAGAAGAATGGAACTCAGAACACCACAGTTGCACC 2345 Query 2311 AGACGGTCTTACCCAGTCTCCTTCTCTGAGAAATTACATTGCTACACGAACAGACGGAGC 2370 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2346 AGATGGTCTTACCCAGTCTCCTTCTCTGAGAAATTACATTGCTACACGAACAGATGGAGC 2405 Query 2371 TCGCAGATGGTAGAGTTTGAGCCTGTCCAGTGTTTGAAGACACTTCAAGAAAGTTGATCA 2430 ||||||||||||||| |||| ||||||||||||||||||| |||||| |||| ||||||| Sbjct 2406 TCGCAGATGGTAGAGCTTGATCCTGTCCAGTGTTTGAAGATACTTCATGAAAATTGATCA 2465 Query 2431 AAGCAAAGCCACCATATTTCACTAGGCCTGCAATATCAAATCTCCATGTAATGTGACAGC 2490 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2466 AAGCAAAGCCACCATATTTCACTAGGCCTGCAATATCAAAACTCCATGTAATGTGACAGC 2525 Query 2491 TGAGAAACTTCAAGTGTGTTAGTTATAGAAATATTAAAACCACGGATTTGTCTAAAATAA 2550 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2526 AGAGAAACTTCGAGTGTGTTAGTTATAGAAATATTAAAACCACGGATTTGTCTAAAATAA 2585 Query 2551 TCACTACTACATTTATTCTTCTACTTTGGTAGTAACAAGCACTATCTTGTTGCATTACAG 2610 ||||||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||| Sbjct 2586 TCACTACTACATTTATTTTTCTACTTTGGTATTAACAAGTACCATCTTGTTGCATTACAG 2645 Query 2611 TTTGCATTGTGCCGCAATTACAGCAGATAGATTAAGTTGTGAATTGTTACAAGCTTTGTT 2670 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2646 TTTGCATTGTGCCGAAATTACAGCAGATAGATTAAGTTGTGAATTGTTACAAGCTTTGTT 2705 Query 2671 TGTACATGTTGAAATGAAAAATTGAGTTCTGAGTTCTGACAAGTGTCACACCCGAAGAAC 2730 |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| Sbjct 2706 TGTACATGTTGAAATGAAAA-TTGAGTTCTGAGTTCTGACAAGTGTTACACCTGAAGAAC 2764 Query 2731 CTCTAAGAATGACTA---GT---------A---G--TTGT--TCAA-CTTCATTAGCTTC 2770 ||| ||||||||||| || | | |||| | || ||||||||||||| Sbjct 2765 CTCAAAGAATGACTACTAGTTCTTCCTGGAACAGGCTTGTAATTAAACTTCATTAGCTTC 2824 Query 2771 TTCTTCAGCACTCTTCTGCTTTTTCTGTGTGCTGTTTCTCATCTGATCACTTGCCCATGA 2830 | ||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 2825 TGCTTCAGCACTCATCTGCTTTTGCTGTGTGCTGTT-CTCATCTGATCACTTGCCCATGG 2883 Query 2831 TAGGCCAA 2838 ||| |||| Sbjct 2884 TAGACCAA 2891 > AT1G17850.2 | Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr1:6145926-6148940 REVERSE LENGTH=2011 Length=2011 Score = 573 bits (310), Expect = 3e-162 Identities = 403/444 (91%), Gaps = 22/444 (5%) Strand=Plus/Minus Query 2415 TCAAGAAAGTTGATCAAAGCAAAGCCACCATATTTCACTAGGCCTGCAATATCAAATCTC 2474 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2011 TCATGAAAATTGATCAAAGCAAAGCCACCATATTTCACTAGGCCTGCAATATCAAAACTC 1952 Query 2475 CATGTAATGTGACAGCTGAGAAACTTCAAGTGTGTTAGTTATAGAAATATTAAAACCACG 2534 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 1951 CATGTAATGTGACAGCAGAGAAACTTCGAGTGTGTTAGTTATAGAAATATTAAAACCACG 1892 Query 2535 GATTTGTCTAAAATAATCACTACTACATTTATTCTTCTACTTTGGTAGTAACAAGCACTA 2594 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| || | Sbjct 1891 GATTTGTCTAAAATAATCACTACTACATTTATTTTTCTACTTTGGTATTAACAAGTACCA 1832 Query 2595 TCTTGTTGCATTACAGTTTGCATTGTGCCGCAATTACAGCAGATAGATTAAGTTGTGAAT 2654 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1831 TCTTGTTGCATTACAGTTTGCATTGTGCCGAAATTACAGCAGATAGATTAAGTTGTGAAT 1772 Query 2655 TGTTACAAGCTTTGTTTGTACATGTTGAAATGAAAAATTGAGTTCTGAGTTCTGACAAGT 2714 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1771 TGTTACAAGCTTTGTTTGTACATGTTGAAATGAAAA-TTGAGTTCTGAGTTCTGACAAGT 1713 Query 2715 GTCACACCCGAAGAACCTCTAAGAATGACTA---GT---------A---G--TTGT--TC 2755 || ||||| |||||||||| ||||||||||| || | | |||| | Sbjct 1712 GTTACACCTGAAGAACCTCAAAGAATGACTACTAGTTCTTCCTGGAACAGGCTTGTAATT 1653 Query 2756 AA-CTTCATTAGCTTCTTCTTCAGCACTCTTCTGCTTTTTCTGTGTGCTGTTTCTCATCT 2814 || |||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||| Sbjct 1652 AAACTTCATTAGCTTCTGCTTCAGCACTCATCTGCTTTTGCTGTGTGCTGTT-CTCATCT 1594 Query 2815 GATCACTTGCCCATGATAGGCCAA 2838 ||||||||||||||| ||| |||| Sbjct 1593 GATCACTTGCCCATGGTAGACCAA 1570 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 141019276773 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5