BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472002 Length=1312 Score E Sequences producing significant alignments: (Bits) Value AT1G17890.1 | Symbols: GER2 | NAD(P)-binding Rossmann-fold supe... 1903 0.0 AT1G73250.1 | Symbols: ATFX, GER1 | GDP-4-keto-6-deoxymannose-3... 854 0.0 > AT1G17890.1 | Symbols: GER2 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:6154268-6155752 REVERSE LENGTH=1353 Length=1353 Score = 1903 bits (1030), Expect = 0.0 Identities = 1243/1341 (93%), Gaps = 34/1341 (3%) Strand=Plus/Plus Query 1 GCGGATATTCAGATCTCCTCCACCTTACATTCTCCGAGGAATTTAACCTTTACCTACAAA 60 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 1 GCGGATATTCAGATCTCCTCCACATTACATTCTCCAAGGAATTTAACCTTTACCTACAAA 60 Query 61 TCTAAGCTTCTGTTCGTTGACTTCGAAAACTGGTAGCTATAAGTCAAAGTCCCCTTTCTC 120 |||||||||||| ||||||||||||||||||| || |||||||||||| ||||| ||||| Sbjct 61 TCTAAGCTTCTG-TCGTTGACTTCGAAAACTGATATCTATAAGTCAAAATCCCCATTCTC 119 Query 121 AATCTCTCATCGTCTTGTAGAACTAATTGACTCGACAATGGCGGACACCACAGGATCCGA 180 |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 120 AATCGCTCATCGTCTTGTAGAACTAATTGACTAAACAATGGCGGACAACACAGGATCCGA 179 Query 181 GATGAAATCAGGTTCGTTTATGTTAGAGAAATCCGCCAAGATCTTTGTCGCTGGACATAG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 GATGAAATCAGGTTCGTTTATGTTAGAGAAATCCGCCAAGATCTTTGTCGCTGGACATAG 239 Query 241 GGGATTGGTTGGATCTGCCATTGTTCGCAAGCTCCAGGATCAGGGTTTCACCAATCTGGT 300 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 240 GGGATTGGTTGGATCTGCCATTGTCCGCAAGCTCCAGGATCAGGGTTTCACCAATTTGGT 299 Query 301 CCTTCGAACCCATTCCGAGCTTGATCTCACTAGCCAATCCGATGTTGAATCCTTCTTTGC 360 ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 300 CCTTCGAACCCATTCAGAGCTTGATCTCACTAGCCAATCAGATGTTGAATCTTTCTTTGC 359 Query 361 TACAGAGAAACCAGTTTATGTCATCCTCGCTGCAGCTAAAGTCGGTGGGATTCATGCTAA 420 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 360 TACAGAGAAACCAGTTTATGTCATCCTAGCTGCTGCTAAAGTCGGTGGGATTCATGCTAA 419 Query 421 CAACACATACCCAGCTGATTTCATTGGTGTCAATCTCCAAATCCAGACCAATGTGATCCA 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 420 CAACACATACCCAGCTGATTTCATTGGGGTCAATCTCCAAATCCAGACCAATGTGATCCA 479 Query 481 CTCTGCTTATA-AGCATGGTGTGAAGAAACTCCTCTTTCTTGGTTCATCTTGCATTTACC 539 ||||||||||| | || |||||||||||||||||||| |||||||||||||||||||||| Sbjct 480 CTCTGCTTATACA-CACGGTGTGAAGAAACTCCTCTTCCTTGGTTCATCTTGCATTTACC 538 Query 540 CCAAATTCGCTCCTCAACCGATTCCTGAATCTGCGCTTCTTACTGGTCCGCTTGAACCGA 599 ||||||| |||||||| |||||||| ||||||||||||||||| |||||||| ||||||| Sbjct 539 CCAAATTTGCTCCTCAGCCGATTCCCGAATCTGCGCTTCTTACCGGTCCGCTCGAACCGA 598 Query 600 CTAACGAATGGTACGCAATTGCCAAGATCGCAGGG-ATTAAGATGTGTCAAGCTTACCGG 658 | ||||||||||| || || ||||||||||| ||| |||||||||||||||||||||||| Sbjct 599 CAAACGAATGGTATGCGATCGCCAAGATCGC-GGGTATTAAGATGTGTCAAGCTTACCGG 657 Query 659 CTTCAGCATCAATGGGATGCCATCTCCGGTATGCCCACGAATCTGTACGGTCAAAATGAT 718 ||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct 658 CTTCAGCATCAGTGGGATGCTATCTCCGGTATGCCCACGAATCTGTATGGTCAGAATGAT 717 Query 719 AATTTCCACCCGGAGAATTCTCATGTGCTGCCTGCTCTCATGAGGAGGTTCCATGAAGCT 778 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 718 AATTTCCACCCGGAGAATTCCCATGTGCTGCCTGCTCTCATGAGGAGGTTTCATGAAGCC 777 Query 779 AAAGCCAACAATGCTGAAGAAGTTGTGGTTTGGGGAAGCGGAAGCCCGTTGCGGGAGTTT 838 |||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||||| Sbjct 778 AAAGCCAATAATGCTGACGAAGTTGTGGTTTGGGGAAGTGGAAGCCCGTTGAGGGAGTTT 837 Query 839 TTACATGTCGATGATTTGGCTGATGCTTGTGTTTTCTTGATGGATCAGTACAGCGGATTT 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 TTACATGTCGATGATTTGGCTGATGCTTGTGTTTTCTTGATGGATCAGTACAGCGGATTT 897 Query 899 GAGCATGTGAATGTAGGAAGTGGTGTCGAAGTGACGATCAAAGAATTGGCTGAGTTGGTG 958 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 898 GAGCATGTGAATGTAGGAAGTGGTGTTGAAGTGACGATCAAAGAATTGGCTGAGTTGGTG 957 Query 959 AAAGAAGTTGTTGGGTTTAAAGGAAAGCTAGTTTGGGACTGC-ACAAAACCAGACGGGAC 1017 ||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct 958 AAAGAAGTTGTTGGGTTTAAAGGAAAGCTTGTTTGGGA-TACCACAAAACCAGACGGGAC 1016 Query 1018 ACCACGGAAACTGATGGATAACTCGAAGCTTGCGTCTTTGGGATGGACACCGAAGATTTC 1077 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1017 ACCAAGGAAACTGATGGATAGCTCGAAGCTTGCGTCTTTGGGATGGACACCGAAGATTTC 1076 Query 1078 ACTAAAAGATGGTCTCTCCCAAACTTATGAATGGTATTTGGAGAATGTTGTGCAGCAGCA 1137 || |||||||| ||||||||||||||||||||||||||||| |||||||||||| || | Sbjct 1077 GCTTAAAGATGGCCTCTCCCAAACTTATGAATGGTATTTGGAAAATGTTGTGCAGAAGAA 1136 Query 1138 GCAGTaaaaaaaaT----TC-A-------------T-T-C-T-CT-TC-ACACGTGAATG 1173 ||||||||||||| || | | | | | || | ||||||||||| Sbjct 1137 GCAGTAAAAAAAACAAGGTCCAAAACACAAAGCAATATTCATTCTCTTTACACGTGAATG 1196 Query 1174 TTTGTGCGTTTGAAATTTGGTTTCAATACAGATCTCT--ATCTCTTTAATGTAATTTTTG 1231 ||| ||||||||| ||||||| | |||||||||||| |||||||| |||||||||||| Sbjct 1197 TTTATGCGTTTGATTTTTGGTT-CTATACAGATCTCTCTATCTCTTTTATGTAATTTTTG 1255 Query 1232 TATTCATGGATTTCATACCGTGCAAGTTAAGCAAACTTATTTTGTAATAAATGTAATATT 1291 |||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||| Sbjct 1256 TATTCATGGATTTCATACAGTTCAAGTTAAGCAAACTTACTTTGTAATAAATGTACCATT 1315 Query 1292 GTTGTTGAGATTATCAGTAAT 1312 |||||||||||||||| |||| Sbjct 1316 GTTGTTGAGATTATCAATAAT 1336 > AT1G73250.1 | Symbols: ATFX, GER1 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 | chr1:27545006-27546435 REVERSE LENGTH=1254 Length=1254 Score = 854 bits (462), Expect = 0.0 Identities = 793/953 (83%), Gaps = 22/953 (2%) Strand=Plus/Plus Query 190 AGG-TTCGTTTATGT-TAGAGAAATCCGCCAAGATCTTTGTCGCTGGACATAGGGGATTG 247 ||| ||||| |||| | || ||||| ||||| ||||| ||||| || ||| | || ||| Sbjct 98 AGGTTTCGTCCATGTCT-GACAAATCTGCCAAAATCTTCGTCGCGGGTCATCGTGGTTTG 156 Query 248 GTTGGATCTGCCATTGTTCGCAAGCTCCAGGATCAGGGTTTCACCAATCTGGTCCTTCGA 307 ||||||||||||||||| |||||||| ||||| || |||||||||||||| || ||| | Sbjct 157 GTTGGATCTGCCATTGTCCGCAAGCTTCAGGAACAAGGTTTCACCAATCTCGTTCTTAAA 216 Query 308 ACCCATTCCGAGCTTGATCTCACTAGCCAATCCGATGTTGAATCCTTCTTTGCTAC-AGA 366 || || ||||||||||||||||| | ||| |||||||||||||||||||| || | ||| Sbjct 217 ACACACGCCGAGCTTGATCTCACTCGTCAAGCCGATGTTGAATCCTTCTTTTCT-CAAGA 275 Query 367 GAAACCAGTTTATGTCATCCTCGCTGCAGCTAAAGTCGGTGGGATTCATGCTAACAACAC 426 ||| ||||||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| Sbjct 276 GAAGCCAGTTTATGTAATCCTAGCAGCAGCTAAAGTTGGTGGTATTCACGCTAACAACAC 335 Query 427 ATACCCAGCTGATTTCATTGGTGTCAATCTCCAAATCCAGACCAATGTGATCCACTCTGC 486 || || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 336 CTATCCTGCTGATTTCATTGGTGTCAATCTCCAGATTCAGACCAATGTGATCCACTCTGC 395 Query 487 TTATAAGCATGGTGTGAAGAAACTCCTCTTTCTTGGTTCATCTTGCATTTACCCCAAATT 546 ||| |||| ||||||||||| || ||||| ||||| ||||| ||||||||||| ||||| Sbjct 396 ATATGAGCACGGTGTGAAGAAGCTTCTCTTCCTTGGATCATCCTGCATTTACCCTAAATT 455 Query 547 CGCTCCTCAACCGATTCCTGAATCTGCGCTTCTT-ACTG-GTCCGCTTGAACCGACTAAC 604 |||||||| || |||||||| ||||| || || || | | |||||||||| ||||| Sbjct 456 TGCTCCTCAGCCAATTCCTGAGTCTGC-TTTGTTAACAGCAT-CGCTTGAACCAACTAAT 513 Query 605 GAATGGTACGCAATTGCCAAGATCGCAGGGATTAAGA-TGTGTCAAGCTTACCGGCTTCA 663 || ||||| || ||||| |||||||| |||||||||| | ||||| ||||| || |||| Sbjct 514 GAGTGGTATGCTATTGCTAAGATCGCTGGGATTAAGACT-TGTCAGGCTTATAGGATTCA 572 Query 664 GCATC-AATGGGATGCCATCTCCGGTATGCCCACGAATCTGTACGGTCAAAATGATAATT 722 ||| | ||||||||| ||||| || ||||| || ||||| || |||| ||||| |||| Sbjct 573 GCA-CGGATGGGATGCAATCTCTGGCATGCCTACTAATCTCTATGGTCCTAATGACAATT 631 Query 723 TCCACCCGGAGAATTCTCATGTGCTGCCTGCTCTCATGAGGAGGTTCCATGAAGCTAAAG 782 ||||||||||||||||||||||||| |||||||| |||||||||||||| || || |||| Sbjct 632 TCCACCCGGAGAATTCTCATGTGCTTCCTGCTCTTATGAGGAGGTTCCACGAGGCGAAAG 691 Query 783 CCAA-CAATGCTGAAGAAGTTGTGGTTTGGGGAAGC-GGAAGCCCGTTGCGGGAGTTTTT 840 || | || || ||||||||||| ||||| | | || || |||||| ||||||| || Sbjct 692 TGAATGGA-GCGGAGGAAGTTGTGGTGTGGGGTA-CAGGTAGTCCGTTGAGGGAGTTCTT 749 Query 841 ACATGTCGATGATTTGGCTGATGCTTGTGTTTTCTTGATGGATC-AGTACAGCGGATTTG 899 ||||| |||||||||||||||||||||||||||||| |||||| | |||||||| || | Sbjct 750 GCATGTTGATGATTTGGCTGATGCTTGTGTTTTCTTGCTGGATCGA-TACAGCGGGTTGG 808 Query 900 AGCATGTGAATGTAGGAAGTGGTGTCGAAGTGACGATCAAAGAATTGGCTGAGTTGGTGA 959 ||||||| || | ||||||||| |||||||| || | ||| |||||||||||||||| Sbjct 809 AGCATGTTAACATTGGAAGTGGTCAAGAAGTGACTATTAGAGAGTTGGCTGAGTTGGTGA 868 Query 960 AAGAAGTTGTTGGGTTTAAAGGAAAGCTAGTTTGGGACTGCACAAAACCAGACGGGACAC 1019 |||| |||||||| ||| |||| ||||| | ||||| ||||| || ||||| || |||| Sbjct 869 AAGAGGTTGTTGGTTTTGAAGGGAAGCTTGGATGGGATTGCACTAAGCCAGATGGCACAC 928 Query 1020 C-ACGGAAACTGATGGATAACTCGAAGCTTGCGTCTTTGGGATGGACACCGAAGATTTCA 1078 | | ||||||| ||||| | ||| ||||| ||||||||||| |||||||| ||| |||| Sbjct 929 CGA-GGAAACTTATGGACAGCTCAAAGCTCGCGTCTTTGGGTTGGACACCTAAGGTTTCT 987 Query 1079 CTAAAAGATGGTCTCTCCCAAACTTATGAATGGTATTTGGAGAATGTTGTGCA 1131 || | ||||||||| |||||||||||| ||||||||| |||||||| |||| Sbjct 988 CTTAGAGATGGTCTGAGCCAAACTTATGATTGGTATTTGAAGAATGTT-TGCA 1039 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64557900870 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5