BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472167 Length=1270 Score E Sequences producing significant alignments: (Bits) Value AT1G19400.1 | Symbols: | Erythronate-4-phosphate dehydrogenase... 1736 0.0 > AT1G19400.1 | Symbols: | Erythronate-4-phosphate dehydrogenase family protein | chr1:6712038-6714247 REVERSE LENGTH=1667 Length=1667 Score = 1736 bits (940), Expect = 0.0 Identities = 1090/1159 (94%), Gaps = 23/1159 (2%) Strand=Plus/Plus Query 122 GTTTTTGGAGTGAGAATTAACTTTGGGTTGTTGATTCTCTTCCTCTGGTCATGGAGGAGC 181 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 522 GTTTTTGGAGTGAGAATTAAGTTTGGATTGTTGATTCTCTTCCTCTGGTCATGGAGGAGC 581 Query 182 CTTGTGAGACACTTGACAATGGTGAAGCCTATCAAATATCTAGATATCATAACTATAACC 241 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 582 CTTGTGAGACACTTGACAGTGGTGAAGCCTATCAAATATCTAGATATCATAACTATAACC 641 Query 242 AACACAGCTCCAGAAGCTTATCACCCTGGTTGGATTTGAGAGTGTTCTATGTCCGGATAA 301 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 642 AACACAGCTCCAGAAGCTCATCTCCCTGGTTGGATTTGAGAGTGTTCTATGTCCGGATAA 701 Query 302 GCAGTTTCATGGTGGAAGATTCAACTCCTGAAGTCCTCACTATCAATCACATTCCTCTGG 361 ||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 702 GCAATTTCGTGGTGGAAGATTCAACTCCTGAGGTCCTCACTATCAATCACATTCCTCTGG 761 Query 362 ATCCAGATACGCTTTTGGAGATTAACGGTGTTAGGATGGGAATGTACTCAGAAGGAGGTT 421 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 762 ATCCAGATACGCTTTTGGAGATTAACGGTGTTAGAATGGGAATGTACTCAGAAGGAGGTT 821 Query 422 CTTCACAGCTTAGGAGAGATCGGGTTGATAAGAAATGTGAAGAAGCTACTTATGTCAGCA 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 822 CTTCACAGCTTAGGAGAGATCGGGTTGATAAGAAATCTGAAGAAGCTACTTATGTCAGCA 881 Query 482 CTGACAATATCAGGTTAACGGGTAGTGTGAAGTTTGAGGTTTTTGACAAAACTGAGCTAG 541 | ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct 882 CAGACAATATCAGGTTAACTGGTAGTGTGAAGTTTGAGGTTTATGACAAAAATGAGCTAG 941 Query 542 TCTTGTCTGGAACTCTTGAGATGTGTGGTAGTAATGGTTTCACTGGGGAATCAAAGAATC 601 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 942 TTTTGTCTGGAACTCTTGAGATGTCTGGTAGTAATGGTTTCACTGGGGAATCAAAGAATC 1001 Query 602 GATGGAAGATGAATTGCGAGGCTGAGATCAGTGCAGGGTCTGGTTTCTTTAAGGAGAAGA 661 ||||||| |||||||| ||||||||| ||| |||||||||||||||| |||||||||||| Sbjct 1002 GATGGAAAATGAATTGTGAGGCTGAGGTCACTGCAGGGTCTGGTTTCCTTAAGGAGAAGA 1061 Query 662 GCATTAACGGTCAAGAGTTATCGTCCCCATTGCCAACTATCGAGGTCTATGTTACTGGTT 721 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1062 GCATAAACGGTCAAGAGTTATCGTCTCCATTGCCAACTATCGAGGTCTATGTTACTGGTT 1121 Query 722 GCTTCTCAGGAACACCCATCATCTTAACCAAGACTCTGCAACTTGGTTTGAGAAAGAAGC 781 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1122 GCTTCTCAGGAACACCCATCATCTTAACCAAGACTCTGCAACTTGGTTTGAAAAAGAAGC 1181 Query 782 AGAGTAGAAGAATGGCATTGGATTCAATTCCTGAGTATGAAACTGCAGAACCTCAGAAAG 841 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 1182 AGAGTAGAAGAATGGCATTGGATGCAATTCCTGAGTATGAAACTGCAGAGCCTCAGAAAG 1241 Query 842 AGTACACCTCCTCTGCGCTTGATCTTCAGGCAACA---GAGTACGCGAACTACAAAGAGG 898 | |||||||| ||| |||||||||||||||||| ||||||| ||| |||||||||| Sbjct 1242 A---CACCTCCTATGCACTTGATCTTCAGGCAACAACAGAGTACGGGAATTACAAAGAGG 1298 Query 899 AATACGAAGGAGACATGTATTGGAGAAGTGAGTGCATAGATGGAGAGATGACATGGTTTA 958 ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct 1299 AATACGAAGGAGACATGTATTGGAGAAGTGAGTGCATTGATGGGGAGATGTCATGGTTTA 1358 Query 959 ATGCAGGTGTAAGGGTTGGTGTTGGGATAGGACTTGGTGTCTGTGTTGGTCTTGGGATTG 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1359 ATGCAGGTGTAAGGGTTGGTGTTGGGATAGGACTTGGTGTCTGTGTTGGTCTTGGGATTG 1418 Query 1019 GTGTCGGTCTTCTAGTTCGTACTTATCAATCAACAACCAGAACCTTCAGGAGGAGGCTTC 1078 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1419 GTGTCGGTCTTCTCGTTCGTACTTATCAATCAACTACCAGAACCTTCAGGAGGAGGCTTC 1478 Query 1079 TCTAGTTTAGTAATACACACATTTGCACCt-ttttttt-ACCTTGAAATTTTGAAAGAAT 1136 ||||||||||||||| | |||||||||||| ||||||| |||||| |||||||||||||| Sbjct 1479 TCTAGTTTAGTAATATATACATTTGCACCTCTTTTTTTTACCTTGCAATTTTGAAAGAAT 1538 Query 1137 -CATCTTTTTAAAACCGTTTGTATTTGGGTGTGATGTGAATTAAACACATTGGTGTGTGG 1195 | ||||||| || ||||||||||||||||||||| |||||| ||||||||||| Sbjct 1539 TC-TCTTTTT-------TT-GTATTTGGGTGTGATGTGAATCAAACACTTTGGTGTGTGG 1589 Query 1196 ATATGTTTGGTA-T-TT-GTTTTGCTGTAAATAAACGAGTGAGAATGTAGCTT-TTTTGT 1251 ||||| | |||| | || ||||||||||||||||| || ||||| ||||| || |||||| Sbjct 1590 ATATGAT-GGTACTATTTGTTTTGCTGTAAATAAAGGAATGAGAGTGTAGTTTCTTTTGT 1648 Query 1252 TTTCAGAATTTGGCTGATG 1270 |||||||||||||||||| Sbjct 1649 ATTCAGAATTTGGCTGATG 1667 Score = 128 bits (69), Expect = 1e-28 Identities = 71/72 (99%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 1 TACACTACGAGACTCGACGAGTCAATTTTAACCAGATTTAGAGGATTTGTGGATGTGATT 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10 TACACTAGGAGACTCGACGAGTCAATTTTAACCAGATTTAGAGGATTTGTGGATGTGATT 69 Query 61 TCTTCTTTTGGT 72 |||||||||||| Sbjct 70 TCTTCTTTTGGT 81 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62449477980 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5