BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472226 Length=1610 Score E Sequences producing significant alignments: (Bits) Value AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:69377... 2531 0.0 AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451... 1585 0.0 AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961106-396... 1061 0.0 AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182... 959 0.0 > AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:6937795-6940582 REVERSE LENGTH=1689 Length=1689 Score = 2531 bits (1370), Expect = 0.0 Identities = 1520/1592 (95%), Gaps = 11/1592 (1%) Strand=Plus/Plus Query 1 AACAGAGACAATTGGTTATATTAGCTGTCTCTCCCCATCTTTCATATTCCTTCACCAtct 60 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 1 AACAGAGACAATTGGTTATATTAGCTGTCACT-CCCATCTTTCATATTCCTTCACCATCT 59 Query 61 ctctctctctcGATCTTGTGAACcaccacacacacactcacacaATGAGAGAGATCCTTC 120 ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| Sbjct 60 CTCTCTCTCTCGATCTTGTGAACCA-C-TACACACACTAACACAATGAGAGAGATCCTTC 117 Query 121 ACATTCAAGGTGGTCAATGCGGAAACCAGATTGGTTCCAAGTTCTGGGAAGTCATCTGCG 180 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 118 ACATTCAAGGTGGTCAATGCGGTAACCAGATTGGTTCCAAGTTCTGGGAAGTCATCTGCG 177 Query 181 ACGAGCACGGTATCGATTCCACCGGACGTTACAGCGGAGACACTGCAGATCTCCAGCTCG 240 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 178 ACGAGCACGGCATCGATTCCACCGGACGTTACAGTGGAGACACTGCAGATCTCCAGCTTG 237 Query 241 AACGTATCAATGTCTATTACAATGAGGCTTCTGGTGGAAGATACGTTCCTCGTGCTGTTC 300 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 238 AACGTATCAATGTCTATTACAATGAAGCTTCAGGTGGAAGATACGTTCCTCGTGCTGTTC 297 Query 301 TCATGGATCTTGAGCCTGGTACTATGGATAGTATCAGATCCGGACCGTTTGGTCAGATCT 360 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 TTATGGATCTTGAGCCTGGTACTATGGATAGTATCAGATCCGGACCGTTTGGTCAGATCT 357 Query 361 TCCGTCCTGATAACTTTGTCTTTGGTCAGTCTGGTGCTGGTAATAATTGGGCTAAAGGTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TCCGTCCTGATAACTTTGTCTTTGGTCAGTCTGGTGCTGGTAATAATTGGGCTAAAGGTC 417 Query 421 ATTACACTGAAGGAGCTGAACTTATTGATGCTGTTCTTGATGTTGTTCGCAAAGAAGCTG 480 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 418 ATTACACTGAAGGTGCTGAACTTATTGATGCTGTTCTTGATGTTGTTCGTAAAGAAGCTG 477 Query 481 AGAACTGCGATTGCCTTCAAGGGTTTCAAGTGTGCCACTCTTTGGGAGGAGGCACAGGTT 540 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| Sbjct 478 AGAACTGCGATTGCCTTCAAGGGTTTCAGGTGTGCCATTCGTTGGGAGGAGGCACAGGTT 537 Query 541 CAGGAATGGGAACTCTATTGATATCGAAGATCCGAGAGGAGTATCCAGACAGAATGATGC 600 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 CAGGAATGGGAACACTATTGATATCGAAGATCCGAGAGGAGTATCCAGACAGAATGATGC 597 Query 601 TCACTTTCTCTGTTTTCCCATCTCCAAAAGTCTCTGACACTGTCGTTGAGCCTTACAATG 660 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 598 TCACTTTCTCTGTTTTCCCATCTCCTAAAGTCTCTGACACAGTCGTTGAGCCTTACAATG 657 Query 661 CAACTCTCTCTGTCCACCAGCTTGTAGAGAACGCTGATGAATGTATGGTCCTCGACAATG 720 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 658 CAACTCTCTCTGTCCATCAGCTTGTAGAGAACGCTGATGAATGCATGGTCCTCGACAATG 717 Query 721 AAGCTCTCTACGATATCTGCTTCCGTACCCTCAAACTCAGCACTCCTAGCTTCGGAGACT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 718 AAGCTCTCTACGATATCTGCTTCCGTACCCTCAAACTCAGCACTCCTAGCTTTGGAGACT 777 Query 781 TGAACCATTTGATCTCCGCAACAATGAGTGGTGTGACTTGCTCCTTAAGGTTCCCGGGAC 840 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 778 TGAACCATTTGATCTCCGCAACAATGAGCGGTGTGACTTGCTCCTTAAGGTTCCCCGGAC 837 Query 841 AGCTAAACTCTGACCTGAGGAAACTCGCGGTGAACCTAATCCCATTCCCTCGTCTCCATT 900 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 AACTAAACTCTGACCTCAGGAAACTCGCGGTGAACCTAATCCCATTCCCTCGTCTCCATT 897 Query 901 TCTTCATGGTGGGTTTCGCGCCGCTAACTTCCCGTGGCTCACAACAATACATCTCACTCA 960 |||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||| Sbjct 898 TCTTCATGGTGGGTTTTGCGCCCCTCACTTCCCGTGGCTCGCAACAATACATCTCACTCA 957 Query 961 CAGTCCCTGAGCTGACTCAACAAATGTGGGACTCCAAAAACATGATGTGTGCAGCTGATC 1020 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 CCGTTCCTGAGCTGACTCAACAAATGTGGGACTCCAAAAACATGATGTGTGCAGCTGATC 1017 Query 1021 CACGTCACGGACGTTACCTCACAGCATCGGCTATTTTCCGAGGACAGATGAGCACAAAAG 1080 ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| Sbjct 1018 CACGTCACGGACGTTACCTCACAGCCTCTGCTATTTTCAGAGGACAGATGAGCACAAAAG 1077 Query 1081 AAGTCGATGAGCAAATCCTAAACATACAGAACAAGAACTCGTCTTACTTCGTTGAGTGGA 1140 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 AAGTCGACGAGCAAATCCTAAACATACAGAACAAGAACTCGTCTTACTTCGTTGAGTGGA 1137 Query 1141 TCCCAAACAATGTAAAATCCAGCGTTTGTGATATCCCACCAAAGGGACTTAAAATGGCGG 1200 |||||||||| || |||||||||||||||||||||||||||||||| || |||||||||| Sbjct 1138 TCCCAAACAACGTGAAATCCAGCGTTTGTGATATCCCACCAAAGGGGCTCAAAATGGCGG 1197 Query 1201 CGACGTTTGTGGGTAACTCGACGTCGATCCAAGAAATGTTTAGGAGAGTGAGTGAGCAAT 1260 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | Sbjct 1198 CGACGTTTGTGGGTAACTCGACGTCGATTCAAGAAATGTTCAGGAGAGTGAGTGAGCAGT 1257 Query 1261 TCACGGCTATGTTTAGGCGTAAAGCGTTTCTGCATTGGTACACAGGAGAAGGAATGGATG 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1258 TCACGGCTATGTTTAGGCGTAAAGCGTTTCTGCATTGGTACACAGGAGAAGGAATGGACG 1317 Query 1321 AAATGGAGTTTACGGAAGCTGAGAGCAATATGAATGATTTGGTCGCTGAATACCAACAGT 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1318 AAATGGAGTTTACGGAAGCTGAGAGCAATATGAATGATTTGGTCGCTGAATACCAACAGT 1377 Query 1381 ACCAAGATGCTACTGCTGATGAGGAAGGTGAGTATGAGGATGAAGAAGAAGAGGAGGAAG 1440 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || Sbjct 1378 ACCAAGATGCTACTGCTGATGAGGAAGGTGAGTATGATGTTGAAGAAGAAGAGGAGGGAG 1437 Query 1441 CTTACGAGACTTGATCCATCACATCAAACATTATAAA-AAAGAGAGAAGGAAACGACTCT 1499 ||| ||||||||||||| || |||||||||| || ||| ||| |||||||||||||| Sbjct 1438 ATTATGAGACTTGATCCACCAAATCAAACATTTTACTTAAA-AGACAAGGAAACGACTCT 1496 Query 1500 TG-ATAATATCTCTTTTTAAATTTGATTAAAATTAAAACTCTGAGAAAATGGGAAAtttg 1558 || | ||| ||||| ||||||||||||| ||| || | | ||| ||||||||||||||| Sbjct 1497 TGGA-AATCTCTCTATTTAAATTTGATTGAAA--AACA-T-TGAAAAAATGGGAAATTTG 1551 Query 1559 ttttaatgtgttttttgtttgagtaattagtt 1590 ||| |||||||||||||||||||||||| ||| Sbjct 1552 TTTAAATGTGTTTTTTGTTTGAGTAATTTGTT 1583 > AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451141-28453640 REVERSE LENGTH=1619 Length=1619 Score = 1585 bits (858), Expect = 0.0 Identities = 1172/1328 (88%), Gaps = 4/1328 (0%) Strand=Plus/Plus Query 105 ATGAGAGAGATCCTTCACATTCAAGGTGGTCAATGCGGAAACCAGATTGGTTCCAAGTTC 164 |||||||| ||||| ||| | ||||| || |||||||| ||||| || |||||||| ||| Sbjct 39 ATGAGAGAAATCCTCCACGTCCAAGGCGGCCAATGCGGTAACCAAATCGGTTCCAAATTC 98 Query 165 TGGGAAGTCATCTGCGACGAGCACGGTATCGATTCCACCGGACGTTACAGCGGAGACACT 224 |||||||| ||||||||||| ||||| | ||| ||||||||||||||| ||| || | Sbjct 99 TGGGAAGTTATCTGCGACGAACACGGCGTTGATCCCACCGGACGTTACAACGGTGATTCC 158 Query 225 GCAGATCTCCAGCTCGAACGTATCAATGTCTATTACAATGAGGCTTCTGGTGGAAGATAC 284 || ||||| |||||||||||||||||||| ||||||||||| ||||||||||| | ||| Sbjct 159 GCCGATCTTCAGCTCGAACGTATCAATGTTTATTACAATGAAGCTTCTGGTGGTCGTTAC 218 Query 285 GTTCCTCGTGCTGTTCTCATGGATCTTGAGCCTGGTACTATGGATAGTATCAGATCCGGA 344 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 219 GTTCCTCGTGCTGTTCTCATGGATCTCGAGCCTGGTACTATGGATAGTATCAGATCTGGT 278 Query 345 CCGTTTGGTCAGATCTTCCGTCCTGATAACTTTGTCTTTGGTCAGTCTGGTGCTGGTAAT 404 || | |||||||| ||||||||||||||||| ||||||||||| || ||||| || ||| Sbjct 279 CCCTACGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTGCCGGAAAT 338 Query 405 AATTGGGCTAAAGGTCATTACACTGAAGGAGCTGAACTTATTGATGCTGTTCTTGATGTT 464 |||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct 339 AATTGGGCGAAAGGTCATTATACTGAAGGTGCTGAACTTATTGATGCTGTTCTCGATGTT 398 Query 465 GTTCGCAAAGAAGCTGAGAACTGCGATTGCCTTCAAGGGTTTCAAGTGTGCCACTCT-TT 523 ||||| || |||||||||||||| ||||||||||||||||||||||| || |||||| || Sbjct 399 GTTCGTAAGGAAGCTGAGAACTGTGATTGCCTTCAAGGGTTTCAAGTATGTCACTCTCTT 458 Query 524 GGGAGGAGGCACAGGTTCAGGAATGGGAACTCTATTGATATCGAAGATCCGAGAGGAGTA 583 || ||||||||| |||||||||||||||||||| |||||||| |||||||| ||||| || Sbjct 459 GG-AGGAGGCACGGGTTCAGGAATGGGAACTCTCTTGATATCAAAGATCCGTGAGGAATA 517 Query 584 TCCAGACAGAATGATGCTCACTTTCTCTGTTTTCCCATCTCCAAAAGTCTCTGACACTGT 643 |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| || Sbjct 518 CCCAGACAGAATGATGCTCACATTCTCTGTTTTCCCATCTCCAAAGGTCTCAGACACAGT 577 Query 644 CGTTGAGCCTTACAATGCAACTCTCTCTGTCCACCAGCTTGTAGAGAACGCTGATGAATG 703 ||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct 578 CGTTGAGCCGTACAATGCAACTCTCTCAGTCCACCAACTTGTAGAGAATGCTGATGAATG 637 Query 704 TATGGTCCTCGACAATGAAGCTCTCTACGATATCTGCTTCCGTACCCTCAAACTCAGCAC 763 |||||||||||||| |||||||| ||||||||||| ||||| || |||||||||||||| Sbjct 638 CATGGTCCTCGACAACGAAGCTCTTTACGATATCTGTTTCCGCACTCTCAAACTCAGCAC 697 Query 764 TCCTAGCTTCGGAGACTTGAACCATTTGATCTCCGCAACAATGAGTGGTGTGACTTGCTC 823 ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 698 TCCTAGCTTTGGAGACTTGAACCACTTGATCTCCGCAACTATGAGTGGTGTGACTTGCTC 757 Query 824 CTTAAGGTTCCCGGGACAGCTAAACTCTGACCTGAGGAAACTCGCGGTGAACCTAATCCC 883 ||||| ||||| ||||| || ||||||||||| ||||||||||| |||||||| ||||| Sbjct 758 TTTAAGATTCCCTGGACAACTCAACTCTGACCTTAGGAAACTCGCCGTGAACCTTATCCC 817 Query 884 ATTCCCTCGTCTCCATTTCTTCATGGTGGGTTTCGCGCCGCTAACTTCCCGTGGCTCACA 943 |||||||||||| |||||||||||||| |||||||| || || |||||||||||||| || Sbjct 818 ATTCCCTCGTCTACATTTCTTCATGGTTGGTTTCGCCCCTCTCACTTCCCGTGGCTCTCA 877 Query 944 ACAATACATCTCACTCACAGTCCCTGAGCTGACTCAACAAATGTGGGACTCCAAAAACAT 1003 ||| |||||||| ||||||||||| |||||||| || |||||||||||| | || ||||| Sbjct 878 ACAGTACATCTCTCTCACAGTCCCGGAGCTGACACAGCAAATGTGGGACGCTAAGAACAT 937 Query 1004 GATGTGTGCAGCTGATCCACGTCACGGACGTTACCTCACAGCATCGGCTATTTTCCGAGG 1063 ||||||||||||||||||||| |||||||||||||||||||| || || || |||||||| Sbjct 938 GATGTGTGCAGCTGATCCACGCCACGGACGTTACCTCACAGCTTCAGCCATGTTCCGAGG 997 Query 1064 ACAGATGAGCACAAAAGAAGTCGATGAGCAAATCCTAAACATACAGAACAAGAACTCGTC 1123 | | ||||||||||| ||||| || || || |||||||| | |||||||||||||| || Sbjct 998 AAAAATGAGCACAAAGGAAGTGGACGAACAGATCCTAAATGTCCAGAACAAGAACTCATC 1057 Query 1124 TTACTTCGTTGAGTGGATCCCAAACAATGTAAAATCCAGCGTTTGTGATATCCCACCAAA 1183 ||||| ||||| ||||||||||||||||| || |||||||| || || || ||||||| Sbjct 1058 CTACTTTGTTGAATGGATCCCAAACAATGTGAAGTCCAGCGTCTGCGACATTCCACCAAC 1117 Query 1184 GGGACTTAAAATGGCGGCGACGTTTGTGGGTAACTCGACGTCGATCCAAGAAATGTTTAG 1243 ||| | |||||||| | |||||||| || |||||||| |||||||| |||||||| || Sbjct 1118 TGGAATCAAAATGGCTTCCACGTTTGTCGGAAACTCGACTTCGATCCAGGAAATGTTCAG 1177 Query 1244 GAGAGTGAGTGAGCAATTCACGGCTATGTTTAGGCGTAAAGCGTTTCT-GCATTGGTACA 1302 |||||| || || || |||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 1178 GAGAGTAAGCGAACAGTTCACGGCTATGTTCAGGCGTAAAGC-TTTCTTGCATTGGTACA 1236 Query 1303 CAGGAGAAGGAATGGATGAAATGGAGTTTACGGAAGCTGAGAGCAATATGAATGATTTGG 1362 |||||||||||||||| || |||||||| || ||||| |||||||| ||||||||| ||| Sbjct 1237 CAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAGCAACATGAATGATCTGG 1296 Query 1363 TCGCTGAATACCAACAGTACCAAGATGCTACTGCTGATGAGGAAGGTGAGTATGAGGATG 1422 || ||||||||||||| |||||||||||||| |||||||| |||| || ||||| || | Sbjct 1297 TCTCTGAATACCAACAATACCAAGATGCTACCGCTGATGAAGAAGACGAATATGATGAAG 1356 Query 1423 AAGAAGAA 1430 |||||||| Sbjct 1357 AAGAAGAA 1364 > AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961106-3963522 REVERSE LENGTH=1696 Length=1696 Score = 1061 bits (574), Expect = 0.0 Identities = 1103/1356 (81%), Gaps = 46/1356 (3%) Strand=Plus/Plus Query 105 ATGAGAGAGATCCTTCACATTCAAGGTGGTCAATGCGGAAACCAGATTGGTTCCAAGTTC 164 |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 136 ATGAGAGAAATCCTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTC 195 Query 165 TGGGAAGTCATCTGCGACGAGCACGGTATCGATTCCACCGGACGTTACAG-CGGAGACAC 223 |||||||| | || || ||||| ||||| ||| |||| || |||||| | ||| | || Sbjct 196 TGGGAAGTTGTATGTGATGAGCATGGTATTGATCCCACTGGTCGTTAC-GTTGGA-A-AC 252 Query 224 TGCAGATCTCCAGCTCGAACGTATCAATGTCTATTACAATGAGGC-TTCTGGTGGAAGAT 282 | | ||||| ||| | || ||| ||||||| || || || ||||| | || | ||||||| Sbjct 253 T-CTGATCTGCAGTTGGAGCGTGTCAATGTTTACTATAACGAGGCATCCT-GCGGAAGAT 310 Query 283 ACGTTCCTCGTGCTGTTCTCATGGATCTTGAGCCTGGTACTATGGATAGTATCAGATCCG 342 | ||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||| | | Sbjct 311 ATGTTCCCCGTGCAATTCTCATGGATCTTGAGCCTGGTACTATGGACAGTGTCAGAACTG 370 Query 343 GACCGTT-TGGTCAGATCTTCCGTCCTGATAACTTTGTCTTT-GGTCAGTCTGGTGCTGG 400 |||| || |||||| |||||| | ||||| |||||||| ||| || || ||||||||||| Sbjct 371 GACC-TTATGGTCAAATCTTCAGGCCTGACAACTTTGT-TTTCGGGCAATCTGGTGCTGG 428 Query 401 TAATAATTGGGCTAAAGGTCATTACACTGAAGGAGCTGAACTTATTGATGCTGTTCTTGA 460 || || ||||||||||| |||||||||||||||||||| |||||||||||||| || || Sbjct 429 AAACAACTGGGCTAAAGGGCATTACACTGAAGGAGCTGAGCTTATTGATGCTGTACTCGA 488 Query 461 TGTTGTTCGCAAAGAAGCTGAGAACTGCGATTGCCTTCAAGGGTTTC-AAGTGTGCCACT 519 |||||| |||||||| |||||||| ||||| || |||||||| |||| |||| || |||| Sbjct 489 TGTTGTACGCAAAGAGGCTGAGAATTGCGACTGTCTTCAAGG-TTTCCAAGTATGTCACT 547 Query 520 CT-TTGGGAGGAGGCACAGGTTCAGGAATGGGAACTCTATTGATATCGAAGATCCGAGAG 578 | |||| |||||||| || || |||||||||||||| | ||||| |||||| | || Sbjct 548 CACTTGGT-GGAGGCACCGGGTCTGGAATGGGAACTCTGCTCATATCTAAGATCAGGGAA 606 Query 579 GAGTATCCAGACAGAATGATGCTCAC-TTTCTCTGTTTTCCCATCTCCAAAAGTCTCTGA 637 |||||||| || ||||||||||| || ||| ||||| |||||||| ||||| |||||||| Sbjct 607 GAGTATCCTGATAGAATGATGCTTACATTT-TCTGTCTTCCCATCACCAAAGGTCTCTGA 665 Query 638 CACTGTCGTTGAGCCTTACAATGCAACTCTCTCTGTCCACCAGCTTGTAGAGAACGCTGA 697 ||| || |||||||| |||||||| || || || || || ||||| || || || ||||| Sbjct 666 CACAGTGGTTGAGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAAAATGCTGA 725 Query 698 TGAATGTATGGTCCTCGACAATGAAGCTCTCTACGATATCTGCTTCCGTACCCTCAAACT 757 ||| |||||||| | ||||||||||| || ||||| ||||| || | || || || || Sbjct 726 TGAGTGTATGGTTTTGGACAATGAAGCCCTTTACGACATCTGTTTTAGAACACTTAAGCT 785 Query 758 CAGCACTCCTAGCTTCGGAGA-CTTGAACCAT-TTGATCTCCGCAACAATGAGTGGTGTG 815 | |||||||||||| || || || ||| ||| || ||||| ||||| |||||||| || Sbjct 786 TACCACTCCTAGCTTTGGTGATCT-GAATCATCTT-ATCTCTGCAACCATGAGTGGAGTT 843 Query 816 ACTTGCTC-CTTAAGGTTCCCGGGACAGCTAAACTCTGACCTGAGGAAACTCGCGGTGAA 874 || |||| |||| |||||||||| ||||| |||||||| |||||||| ||||| ||||| Sbjct 844 ACATGCTGTCTTA-GGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGAA 902 Query 875 CCTAATCCCATTCCCTCGTCTCCA-TTTCTTCATGGTGGGTTTCGCGCCGCTAACTTCCC 933 ||| || || |||||||||||||| ||| |||||||| ||||| || || || || |||| Sbjct 903 CCTCATTCCTTTCCCTCGTCTCCACTTT-TTCATGGTTGGTTTTGCCCCTCTCACCTCCC 961 Query 934 GTGGCTCACAACAATACA-TCTCACTCACAGTCCCTGAGCTGACTCAACAAATGTGGGAC 992 |||| || || || ||| | ||||||| |||||||||||||| ||||| |||||||| Sbjct 962 GTGGGTCTCAGCAGTACCGTG-CACTCACTGTCCCTGAGCTGACCCAACAGATGTGGGAT 1020 Query 993 TCCAAA-AACATGATGTGTGCAGCTGATCCACGTCACGGACGTTACCTCACAGCATCGGC 1051 || ||| ||||||||||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 1021 TC-AAAGAACATGATGTGCGCAGCAGACCCGCGCCACGGGCGGTACCTAACTGCCTCGGC 1079 Query 1052 TATTTTCCGAGGACA-GATGAGCACAAAAGAAGTCGATGAGCAAATCCTAAACATACAGA 1110 || ||||| || || |||||||||||||||||| || ||||| || ||||| |||||| Sbjct 1080 CATGTTCCGTGG-CAAGATGAGCACAAAAGAAGTGGACGAGCAGATGATAAACGTACAGA 1138 Query 1111 ACAAGAACTCGTCTTACTTCGTTGAGTGGATCCCAAACAATGTAAAATCCAGCGTTTGTG 1170 |||| ||||| || ||||| || || ||||| |||||||| || || || ||||| |||| Sbjct 1139 ACAAAAACTCTTCCTACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGCGTCTGTG 1198 Query 1171 ATAT--C-CCACCAAAGGGACT-TAAAATGGCGGCGACGTTTGT-GGGTAACTCGACGTC 1225 | || | || || | || || | || |||| |||| ||| | ||| || || || || Sbjct 1199 ACATAGCTCC-CCGA-GGT-CTCTCAA-TGGCATCGACATTTATTGGG-AATTCCACATC 1253 Query 1226 GATCCAAGAAATGTTTAGGAGAGTGAGTGAGCAATTCACGGCTATGTTTAGGCGTAAAGC 1285 ||||||||| ||||||||| | ||||| ||||| ||||| |||||||| ||| | ||||| Sbjct 1254 GATCCAAGAGATGTTTAGGCGGGTGAGCGAGCAGTTCACTGCTATGTTCAGGAGGAAAGC 1313 Query 1286 GTTTCT-GCATTGGTACACAGGAGAAGGAATGGATGAAATGGAGTTTACGGAAGCTGAGA 1344 ||||| ||||||||||||||| ||||||||||| || ||||||||||| |||||||||| Sbjct 1314 -TTTCTTGCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTTACTGAAGCTGAGA 1372 Query 1345 GCAATATGAATGATTTGGTCGCTGAATACCAACAGTACCAAGATGCTACTGCTGATGAGG 1404 |||| ||||| ||| | ||| | || ||||| || |||||||| || ||||| ||||| | Sbjct 1373 GCAACATGAACGATCTAGTCTCAGAGTACCAGCAATACCAAGACGCAACTGCAGATGACG 1432 Query 1405 AAGGTGAGTATGAGGATGAAGAAGAAGAGGAGGAAG 1440 |||| |||||||| | ||||| || || || |||| Sbjct 1433 AAGGCGAGTATGA--A-GAAGACGAGGATGAAGAAG 1465 > AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182092-11184072 FORWARD LENGTH=1693 Length=1693 Score = 959 bits (519), Expect = 0.0 Identities = 1088/1360 (80%), Gaps = 50/1360 (4%) Strand=Plus/Plus Query 104 AATGAGAGAGATCCTTCACATTCAAGGTGGTCAATGCGGAAACCAGATTGGTTCCAAGTT 163 ||||||||| || ||||| |||||||| ||||| |||||||||||||| || | ||||| Sbjct 126 AATGAGAGAAATTCTTCATATTCAAGGAGGTCAGTGCGGAAACCAGATCGGAGCTAAGTT 185 Query 164 CTGGGAAGTCATCTGCGACGAGCACGGTATCGATTC-CACCGGAC-GTTACA-GCGGAGA 220 ||||||||| || |||| |||||||||||| || || ||||| | | | || | || | Sbjct 186 CTGGGAAGTTATTTGCGGCGAGCACGGTATTGA-TCAAACCGGTCAG-T-CATGTGGCG- 241 Query 221 CACTGCAGATCTCCAGCTCGAACGTATCAATGTCTATTACAATGAGGCT-TCTGGTGG-A 278 | | ||||||| ||||| ||| | ||||||||||||| || || ||| | || || | Sbjct 242 -A-TACAGATCTACAGCTTGAAAGGATCAATGTCTATTTTAACGAAGCTAGC-GGAGGCA 298 Query 279 AGATACGTTCCTCGTGCTGTTCTCATGGATCTTGAGCCTGGTACTATGGATAGTATCAGA 338 | ||||||||||||||||||||| |||||||| |||||||| ||||||||| | ||||| Sbjct 299 A-ATACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGA 357 Query 339 TCCGGACCGTTTGGTCAGATCTTCCGTCCTGATAACTTTGTCTTTGGTCAGTCTGGTGCT 398 || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||| Sbjct 358 TCTGGGCCGTTTGGTCAGATTTTCCGGCCTGATAACTTCGTTTTTGGTCAGTCTGGTGCT 417 Query 399 GGTAATAATTGGGCTAAAGGTCATTACACTGAAGGAGCTGAACTT-ATTGATGCTGTTCT 457 || ||||| ||||| |||||||||||||| || ||||||| | || |||||| |||| || Sbjct 418 GGGAATAACTGGGCGAAAGGTCATTACACGGAGGGAGCTG-AGTTGATTGATTCTGTGCT 476 Query 458 TGATGTTGTTCGCAAAGAAGCTGAGAACTGCGATTGCCTTCAAGGGTTTCAAGTGTGCCA 517 ||||||||| | || |||||||||||||| ||||| |||||||| |||||||| || || Sbjct 477 TGATGTTGTGAGGAAGGAAGCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCA 536 Query 518 CTCTTTGGGAGGAGGCACAGGTTCAGGAATGGGAACTC-TATTGATATCGAAGATCCGAG 576 |||||||||||||| || ||||| ||||||||||| | | || || || ||||| ||| Sbjct 537 TTCTTTGGGAGGAGGAACTGGTTCTGGAATGGGAACACTTCTT-ATTTCTAAGATTAGAG 595 Query 577 AGGAGTATCCAGA-CAGAATGATGCTCA-CTTTCTCTGTTTTCCCATCTCCAAAAGTCTC 634 |||| |||||||| | | |||||| | | |||| || || ||||||||||| || ||||| Sbjct 596 AGGAATATCCAGATC-GTATGATGATGACCTTT-TCGGTCTTCCCATCTCCTAAGGTCTC 653 Query 635 TGACACTGTCGTTGAGCCTTACAATGCAACTCTCTCTGTCCACCAGCTTGTAGAGAACGC 694 ||| || || |||||||| |||||||| ||||| || || |||||||| || ||||| || Sbjct 654 TGATACAGTTGTTGAGCCATACAATGCTACTCTTTCCGTTCACCAGCTCGTTGAGAATGC 713 Query 695 TGATGAATGTATGGTCCTCGACAATGAAGCTCTCTACGATATCTGCTTCCGTACCCTCAA 754 ||||||||||||||| | || || |||||||| ||||||||||| ||||||||| | || Sbjct 714 TGATGAATGTATGGTTTTGGATAACGAAGCTCTTTACGATATCTGTTTCCGTACCTTGAA 773 Query 755 ACTCAGC-ACTCCTAGC-TTCGGAGA-CTTGAACCATTTGATCTCCGCAACAATGAGTGG 811 || || | ||||| | || || || ||| |||||| | ||||| || ||||||||||| Sbjct 774 GCT-TGCTAATCCTA-CATTTGGTGACCTT-AACCATCTCATCTCAGCTACAATGAGTGG 830 Query 812 TGTGACTTGCT-CCTTAAGGTTCCCGGGACAGCTAAACTCTGACCTGAGGAAACTCGCGG 870 ||| || |||| ||| ||||||| || || |||||||||||||| || ||||| || | Sbjct 831 TGTTACATGCTGTCTT-CGGTTCCCTGGTCAACTAAACTCTGACCTTAGAAAACTTGCTG 889 Query 871 TGAACCTAATCCCATTCCCTCGTCTCCATTTCTTCATGGTGGGTTTCGCGCCGCTAACTT 930 ||||||| || || ||||| || ||||| ||||||||||| ||||| || || | || | Sbjct 890 TGAACCTTATTCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCTTTGACAT 949 Query 931 CCCGTGGCTCACAACAATACATCT-CAC-TCACAGTCCCTGAGCTGACTCAACAAATGTG 988 | | || || |||||||||| | | | | | ||||||||||| |||||||| ||||| Sbjct 950 CAAGAGGATCTCAACAATACA-GTGC-CTTGAGTGTCCCTGAGCTAACTCAACAGATGTG 1007 Query 989 GGACT-CCAAAAACATGATGTGTGCAGCTGATCCACGTCACGGACGTTACCTCACAGCAT 1047 ||| | |||||||||||||||||||||||||||| ||||| || |||||| | ||||| | Sbjct 1008 GGA-TGCCAAAAACATGATGTGTGCAGCTGATCCTCGTCATGGTCGTTACTTGACAGCTT 1066 Query 1048 CGGCTATTTTCCGAGGACAGATGAGCACAAAAGAAGTCGATGAGCAAATCCTAAACATAC 1107 | ||| | ||||| ||| ||||||| || ||||| || ||||| || || | ||| | | Sbjct 1067 CTGCTGTCTTCCGTGGAAAGATGAGTACCAAAGAGGTTGATGAACAGATGATGAACGTCC 1126 Query 1108 AGAACAAGAACTCGTCTTACTTCGTTGAGTGGATCCCAAACAATGTAAAATCCAGCGTTT 1167 ||||||| ||||| || ||||| ||||| ||||| ||||| || || ||||| ||||| | Sbjct 1127 AGAACAAAAACTCCTCATACTTTGTTGAATGGATTCCAAATAACGTGAAATCAAGCGTCT 1186 Query 1168 GTGATATCCCACCAAAGGGACTT-AAAATGGCGGCGACGTTTG-TGGGTAACTCGACGTC 1225 | ||||| | || | || || |||||||| | || ||| | || ||||| || || Sbjct 1187 GCGATATAGCTCCCACTGGT-TTGAAAATGGCATCAAC-TTTCATTGGAAACTCAACTTC 1244 Query 1226 GATCCAAGAAATGTTTAGGAGAGTGAGTGAGCAATTCACGGCTATGTTTAGGCGTAAAG- 1284 ||||| |||||||| ||| | |||||||| || ||||| || ||||| ||| | |||| Sbjct 1245 AATCCAGGAAATGTTCAGGCGTGTGAGTGAACAGTTCACTGCCATGTTCAGGAG-AAAGG 1303 Query 1285 CGTTTC-TGCATTGGTACACAGGAGAAGGAATGGATGAAATGGAGTTTACGGAAGCTGAG 1343 | |||| | |||||||||||||||||||||||||| || |||||||| || ||||| ||| Sbjct 1304 C-TTTCCTTCATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAG 1362 Query 1344 AGCAATATGAATGAT-TTGGTCGCTGAATACCAACAGTACCAAGATGCTACTG-CTGATG 1401 || || ||||||||| ||| | || || || || || || ||||||||||| | | | || Sbjct 1363 AGTAACATGAATGATCTTGTT-GCAGAGTATCAGCAATATCAAGATGCTACAGTCGG-TG 1420 Query 1402 AGGAAGGTGAGTATGAGGATGAAGAAGAAGAGGAGGAAGC 1441 | || || |||| ||||| || |||||||| || ||||| Sbjct 1421 AAGA-GG--AGTACGAGGAGGACGAAGAAGAAGAAGAAGC 1457 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79517663280 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5