BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472386 Length=612 Score E Sequences producing significant alignments: (Bits) Value AT1G21500.1 | Symbols: | unknown protein; Has 29 Blast hits to... 1009 0.0 > AT1G21500.1 | Symbols: | unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7529882-7531025 REVERSE LENGTH=617 Length=617 Score = 1009 bits (546), Expect = 0.0 Identities = 591/613 (96%), Gaps = 2/613 (0%) Strand=Plus/Plus Query 1 ACTCTATCTTCTATTAGTGTGTTTACCAATTTTCT-TTACATCGCTCGCTTTTACATTTT 59 ||||||||||||||||||||||||||||||||| | ||||||| || ||||||||||||| Sbjct 1 ACTCTATCTTCTATTAGTGTGTTTACCAATTTT-TGTTACATCTCTTGCTTTTACATTTT 59 Query 60 CTTGAATTAGCCATGGTGGCACATTCACTCGTTCCTCTCTCACCGGCTGCTCACGCCACC 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 60 CTTGAATTAGCCATGGTGGCACATTCACTCGTTCCTCTCTCACCGGCTGCTCACGCCGCC 119 Query 120 AGACTCTCCTCTCCATCGCCGCGGTCACTGCCGCAGGCTCCTCCCGTCGTCCTTGCAGTT 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 AGACTCTCCTCTCCATCGCCGCGGTCACTGCCGCAGGCTCCTCCCGTCGTCCTTGCAGTT 179 Query 180 CCACCAATTAATCGCAGGACAATTTTGGTGGGGCTTGGGGGTGCATTTTGGAGTTGGAAC 239 ||||||||||||||||||||||||||||||||||| || ||||| | |||||||||||| Sbjct 180 CCACCAATTAATCGCAGGACAATTTTGGTGGGGCTAGGCGGTGCGCTATGGAGTTGGAAC 239 Query 240 GCTCTGACCGCTAAGGAGGATGCAATGGCGGCAGCAAGACGGCCGCCTCCACCACCACCT 299 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 240 GCTCTGGCCGCTAAGGAGGAGGCAATGGCGGCAGCAAGACGGCCGCCTCCACCACCACCT 299 Query 300 AAGGAGAAGAAAGACCCGACCGTGAGCGGAGTTCAGGCCAAGGTATTGGCGAGTAAGAAG 359 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 300 AAGGAGAAGAAAGACCCGACCGTGACCGGAGTTCAGGCCAAGGTATTGGCGAGTAAGAAG 359 Query 360 CGCAAAGAAGAAATGAAGGCTTCCATTGCTAAACTTAGAGAGAAAGGCAAACCTGTTGTT 419 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 CGTAAAGAAGAAATGAAGGCTTCCATTGCTAAACTTAGAGAGAAAGGCAAACCTGTTGTT 419 Query 420 GAAGCAAAACCATCTTCCTCTTCTTCAGAATAGCATCCAAGCAACAATTTAAACCCTTTC 479 |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| Sbjct 420 GAAGCAAAACCATCCTCTTCTTCTTCAGAATAGCATCCGAGCAACAATTTAAACCCTTTC 479 Query 480 CATTAATTCATCTGTCTACCAAATTCATCCCTATGATGTTAATTCACTACTATATTTCAA 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 CATTAATTCATCTGTCTACCAAATTCATCCCTATGATGTTAATTCACTACTATATTTCGG 539 Query 540 TTTACTCCTATGCTGATTTTGTGGTAGTAAATCCAAAAGCATTCTAGCTTGTCAGAAATC 599 |||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 540 TTTATTCTTATGCTGATTTTGTGGTAGTAAATTCAAAAGCATTCTAGCTTGTCAGAAATC 599 Query 600 ATCACAATTAGAT 612 ||||||||||||| Sbjct 600 ATCACAATTAGAT 612 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29487444289 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5