BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472406 Length=2273 Score E Sequences producing significant alignments: (Bits) Value AT1G21680.1 | Symbols: | DPP6 N-terminal domain-like protein |... 3262 0.0 > AT1G21680.1 | Symbols: | DPP6 N-terminal domain-like protein | chr1:7613005-7615339 FORWARD LENGTH=2335 Length=2335 Score = 3262 bits (1766), Expect = 0.0 Identities = 2076/2227 (93%), Gaps = 16/2227 (1%) Strand=Plus/Plus Query 1 CCGCCATGAATAT-TGCTCAGATTATCTTCCTCGCGTCCCTTCTGCTACCACTTCACGCA 59 ||||||||||||| | |||||||||| ||| ||||||||||||| |||| |||||| | Sbjct 19 CCGCCATGAATATAT-CTCAGATTATTTTCTTCGCGTCCCTTCTTCTACGGCTTCACTTA 77 Query 60 TCAACTTTGGAACATCAGAATTCGAACGCTGGTGATGGAGACACCATCATATTCACCACT 119 ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 78 TCAACGGCGGAACATCAAAATTCAAACGCTGGTGATGGAGACACCATCATATTCACCACT 137 Query 120 CTAGGACGATCGCGCTACGAATTCGACATATTCTCCCTCTCAACGACTCATCCACCGTCC 179 ||||||||||||| ||||||||| ||||||||| ||||||| |||||||| || ||||| Sbjct 138 CTAGGACGATCGCACTACGAATTTGACATATTCGCCCTCTCCACGACTCAACCGCCGTCA 197 Query 180 GATTCC-AACGAGCTCCGTATCACCGATGGAGAATCGGTAAACTTCAACGGCTATTTCCC 238 | |||| | |||||||| ||||||||||| ||||||||||| ||||||||||||||||| Sbjct 198 GTTTCCGGA-GAGCTCCGAATCACCGATGGGGAATCGGTAAATTTCAACGGCTATTTCCC 256 Query 239 GTCTCCTTCTCCGGCGCTCA-TCTCTCTCCTTCCTGACGAAACCCTAATTCAACTTGAAG 297 ||||||||||||||| || | | ||||||||||| |||||||||||||||||| | |||| Sbjct 257 GTCTCCTTCTCCGGCTCT-ATTATCTCTCCTTCCCGACGAAACCCTAATTCAAATGGAAG 315 Query 298 ATTCGTCTCCTCTGCATCTCATCTACGTCACCGAGAGAAACGGTACTTCTAGCATATACT 357 |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| Sbjct 316 ATTCGTCTCCTCTGCATCTCATATACGTCACCGAGAGAAACGGTACTTCTAGCTTGTACT 375 Query 358 ACGATCTAATTTACGGCGGCGACTCCGATTCTAAAATGAAACGACGATCGGTGTTAGAAG 417 |||||||| |||||||||| | || |||| ||||| ||||||| ||||||||||||||| Sbjct 376 ACGATCTAGTTTACGGCGGTAATTCTGATTTTAAAACGAAACGAAGATCGGTGTTAGAAG 435 Query 418 CACCGTCTCGAGTCCAAGTTCCGTTGTTATCCGGCTTTGATCATCGGAGTGGCATGACGG 477 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 436 CACCGTCTCGAGTCCAAGTTCCGTTGTTATCCCGCTTTGATCATCTGAGTGGCATGACGG 495 Query 478 TAAATTCATTTAAAGATAAGCCTAGTTTGAGTGGTGAGTTTCTTGTCTACGTGTCAACTC 537 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 496 TAAATTCTTTTAAAGATAAGCCTAGTTTGAGTGGTGAGTTTATTGTCTACGTGTCAACCC 555 Query 538 ACGAAAACTCAGGTGAGCCGAGAACAAGCTGGACCGCCGTTTACTCTACCGAGTTGAGAA 597 | || | |||||||||||||||| ||||||||||||||||||||||||||||||| | || Sbjct 556 ATGAGAGCTCAGGTGAGCCGAGAGCAAGCTGGACCGCCGTTTACTCTACCGAGTTAAAAA 615 Query 598 CTGGGTTAACCCGGCGGTTAACACCGAGTGGTGTAGCTGATTTTAGCCCGGCGGTGTCGC 657 | ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 616 CCGGGTTAACCAGGCGGTTAACACCGAGTGGTGTAGCTGATTTCAGCCCGGCGGTATCGC 675 Query 658 CTTCCGGAAATTTAACAGCCGTGGCTTCGTACGGAGAGAGAGGCTGGACAGGGGAAGTTG 717 |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct 676 CTTCCGGAAATTTAACGGCTGTGGCTTCATACGGAGAGAGAGGCTGGACAGGGGAAGTTG 735 Query 718 AAGAGCTTA-GTACGGACATATATGTATTCTCGACTCGGGATGGGACTCACCGAGTCAAG 776 |||||| || |||||||||| |||||||||| ||||||||||||| ||||||| |||||| Sbjct 736 AAGAGC-TACGTACGGACATCTATGTATTCTTGACTCGGGATGGGTCTCACCGTGTCAAG 794 Query 777 GTGGTGGAGCACGGTGGTTGGCCGTGTTGGGTCGATGAGTCGACTCTGTATTTCCATAGA 836 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 795 GTGGTGGAGCACGGTGGTTGGCCGTGTTGGGTTGATGAGTCGACTCTGTATTTCCATAGA 854 Query 837 AGAAGCGAGGAGGATGGTTGGATCAGCGTTTACCGAGCTATCTTACCTGAAAACGGACCG 896 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 855 AGAAGTGAGGAGGATGGTTGGATCAGCGTTTACCGAGCCATCTTACCTGAAAACGGACCG 914 Query 897 TTGACTACAGAGTCAGTGACTATACAACGAGTCACACCACCGGGAGTTCACGCTTTTACA 956 |||||||| ||||| ||||| || || ||||||||||||||||||||||||||||| ||| Sbjct 915 TTGACTACTGAGTCGGTGACAATTCAGCGAGTCACACCACCGGGAGTTCACGCTTTCACA 974 Query 957 CCTGCCACGTCACCAAACAACCACGAGTTCATAGCGGTGGCGACGAGGAGACCAGGCTCG 1016 || ||||||||||||||||||||||||||| | ||||| || || ||||||||||||||| Sbjct 975 CCGGCCACGTCACCAAACAACCACGAGTTCGTTGCGGTAGCTACAAGGAGACCAGGCTCG 1034 Query 1017 GATTACCGCCACGTGGAGTTGCTTGATCTACAGAGGAATGAGTTTATTGAGCTGACTCGT 1076 ||||||||||||||||||||| |||||||| |||||||||||||||| ||| |||||||| Sbjct 1035 GATTACCGCCACGTGGAGTTGTTTGATCTAAAGAGGAATGAGTTTATAGAGTTGACTCGT 1094 Query 1077 TTGGTGGCGCCAAAGAGTCATCACTTGAATCCGTTCTTGTCCCCTGATTCGTCTCGAGTC 1136 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1095 TTGGTGGCGCCAAAGAGTCATCACTTGAATCCATTCTTGTCCCCTGACTCGTCTCGAGTC 1154 Query 1137 GGATACCATAGTTGTAGAGGCGAGGCTAACGGACGGAGAAGTCCTCTGCTTTTTCTAGAG 1196 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| || || || Sbjct 1155 GGATATCATAGTTGTAGAGGCGATGCTAATGGACGGAGAAGTCCTCTGCTCTTCCTTGAA 1214 Query 1197 AATATACAAACCACTACAAGGGACCTCTCTCTCTTTAGAATCGATGGTTCGTTTCCTTCC 1256 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1215 AATATTCAAACCACTACAAGGGACCTCTCTCTCTTTAGAATTGATGGTTCGTTTCCTTCG 1274 Query 1257 TTCTCACCTGGAGGTGATCGTATTGCATACGTCAAAATGCCTGGTGTATTTGTGGTGAAG 1316 ||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct 1275 TTCTCACCTGGAGGTGATCGTATCGCATACGTTAAGATGCCTGGTGTGTTTGTGGTGAAG 1334 Query 1317 CCGGATGGTTCAGGGCAGCGTGAAGTGTACAACGGAATGGCGTTTTCGACGGCTTGGGAT 1376 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1335 CCGGATGGTTCAGGGCAGCGTGAAGTGTACAAGGGAATGGCGTTTTCGACAGCTTGGGAT 1394 Query 1377 CCGGTTCGACCTGGAGTTGTGTACTCTAGCTCAGGTCCAACGTTTGCTACAGAGAGAACA 1436 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1395 CCGGTTCGACCTGGAATTGTGTACTCTAGCTCAGGTCCAACGTTTGCTACAGAGAGAACA 1454 Query 1437 GAGGTTGATGTCATCTCTATTGAAGTCGATGCAGCTGACAAGTCATCTTCCGTGAGGAGG 1496 ||||||||||| ||||||||||| || |||||||| || ||||||||||||||||||||| Sbjct 1455 GAGGTTGATGTTATCTCTATTGACGTTGATGCAGCCGATAAGTCATCTTCCGTGAGGAGG 1514 Query 1497 CTAACGACAAACGGGAAGAACAATGCTTTCCCTTGGCCATCTCCGGATGGTAAGCGGATA 1556 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1515 CTAACGACAAACGGGAAGAACAATGCTTTCCCTTGGCCATCTCCTGATGGTAAGCGGATA 1574 Query 1557 GTGTTTCGTTCGGGCCGGACTGGTCACAAAAACCTCTACATAATGGATGCTGAGAAAGGC 1616 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1575 GTGTTTCGTTCGGGGCGGACTGGTCACAAAAACCTCTACATAATGGATGCTGAGAAAGGA 1634 Query 1617 GAAAGAGGTGGTCTATGGAGGTTAACCGAAGGTGCGTGGACTGACACAATGTGTAACTGG 1676 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1635 GAAAGCGGTGGTCTATGGAGGTTAACCGAAGGTGCGTGGACCGACACAATGTGTAACTGG 1694 Query 1677 TCACCGGATGGGGAATGGATCGCGTTTGCATCCGATCGAGAAAGCCCTGGCTCGGGTAGT 1736 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1695 TCACCGGATGGGGAATGGATCGCGTTTGCATCAGATCGAGAAAGCCCTGGCTCGGGTAGT 1754 Query 1737 TTCGAGCTCTTCTTGATCCACCCCAACGGAACAGGGTTTAGGAAACTCATCCAAAGCGGG 1796 || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 1755 TTTGAGCTCTTCTTGATCCACCCCAACGGAACAGGGTTAAGGAAGCTCATCCAAAGCGGG 1814 Query 1797 ACAGGTGGGAGAACAAACCACCCAATCTTCAGCCCGGACAGTAAATCATTAGTCTTCACA 1856 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1815 ACGGGTGGGAGAACAAACCACCCGATCTTCAGCCCGGACAGTAAATCATTAGTCTTCACT 1874 Query 1857 TCTGATTATGCTGGGATCTCAGCGGAACCGATCTCGAACCCGCATCATTACCAGCCATAC 1916 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1875 TCTGATTATGCTGGAATCTCGGCGGAACCGATCTCGAACCCGCATCATTACCAGCCATAC 1934 Query 1917 GGTGATATCTTCACGGTGAAATTAGATGGCTCAAATTTGAGGAGGCTGACGCATAACTCT 1976 |||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| Sbjct 1935 GGTGATATCTTCACGGTGAAATTAGATGGCTCTAATGTGAGGAGGCTAACGCATAACTCT 1994 Query 1977 TATGAAGATGGGACACCGGCATGGGCCCCTCGGTTCATCCACCCGAACAATGTGGTGCTG 2036 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct 1995 TATGAAGATGGGACACCGGCATGGGCCCCTCGGTTCATCCACCCCAACAATGTGGAGCTA 2054 Query 2037 CAAAGGAGGAACGATTCTAGGTGCTCGTTCGAAGACTGTCACTGGCTAAACAAGTACCCT 2096 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2055 CAAAGGAGGAATGATTCTAGGTGCTCGTTCGAAGACTGTCACTGGCTCAACAAGTACCCT 2114 Query 2097 ACACTAAAAGGCCGAAAAATCTCTTGTTAATATGTATGATTAGAACAGAAATGTATCCCA 2156 |||||||||||||||||||| |||||||||||||||| | | ||| ||||||||| Sbjct 2115 ACACTAAAAGGCCGAAAAATATCTTGTTAATATGTATC-T-A---CAGTTTTGTATCCCA 2169 Query 2157 GCTTGTAACTCTACTACTTATATATTTGTATGAGACTGCCAATGTATATGTATAAGACTT 2216 ||||||||||||||| | ||| |||||||||||||||||| |||||||| ||||||||| Sbjct 2170 GCTTGTAACTCTACT--T-ATAGATTTGTATGAGACTGCCACTGTATATGCATAAGACTT 2226 Query 2217 TGTATTA 2223 ||||||| Sbjct 2227 TGTATTA 2233 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 112800624615 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5