BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472449 Length=713 Score E Sequences producing significant alignments: (Bits) Value AT1G22160.1 | Symbols: | Protein of unknown function (DUF581) ... 1013 0.0 > AT1G22160.1 | Symbols: | Protein of unknown function (DUF581) | chr1:7823149-7823971 FORWARD LENGTH=730 Length=730 Score = 1013 bits (548), Expect = 0.0 Identities = 674/730 (92%), Gaps = 27/730 (4%) Strand=Plus/Plus Query 1 ACTTCCCTCTTTCTCTCTTTCACTTTGCTCTGTTCACTCAGAGCATC-AAGAAACAAAAG 59 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1 ACTTCCCTCTTTCTCTCTTTCACTTTGCTCTGTTCACTCAGAGCATCAAATAAACAAAAG 60 Query 60 AGAGAAACCAAAAACACACAATACTAACGATGTTGCTAGGGAAGAGACAGAGACCACCAA 119 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 61 AGAGAAACCAAAACCACACAAGACTAACGATGTTGCTAGGGAAGAGACAGAGACCACCAA 120 Query 120 TAAAGAGAACCACGAGTCTCTCTGAGATCAAGTTCGATTTGAATCAACCTAGCGAACAAG 179 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 121 TAAAGAGAACCACGAGTCTATCTGAGATTAAGTTCGATTTGAATCAACCTAGCGAACAAG 180 Query 180 AACCATCCAATCATCAGATTCAGCTCGTGGCCGTTGATGAACACCGTCAAGTTCATCAAC 239 |||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||| Sbjct 181 AACCATCCGATCATCAGATTCAGCTTGTGAACGTTGATGAACATCGTCAAGTTCATCAAA 240 Query 240 GATTGTTAGATCAACGGCTCTTAGCGATGGTCTCACCAAGAGGTACACAGAGAAGACACT 299 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 241 GATTGTTAGATCAACGGCTTTTAGCGATGGTCTCACCAAGAGGTACACAGAGAAGACACT 300 Query 300 CAAGTGATTACTCTGAAGATTTTCTGAGATCTTGCTCTCTTTGTAAACGTCATCTTGTTC 359 |||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 301 CAAGTGATTATTCTGAAGATTTTCTAAGATCTTGCTCTCTTTGTAAACGTCTTCTTGTTC 360 Query 360 CTGGCCGTGACATCTATATGTATAGAGGAGATAGAGCGTTTTGTAGTTTAGAGTGCAGGC 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ATGGCCGTGACATCTATATGTATAGAGGAGATAGAGCGTTTTGTAGTTTAGAGTGCAGGC 420 Query 420 AACAACAAATTACAGTGGACGAGA--A-G-A-AAG--G-----TTCGGTGAGGTCCACCG 467 |||||||||||||||||||||||| | | | ||| | |||||||||||||||| Sbjct 421 AACAACAAATTACAGTGGACGAGAGGAAGGAGAAGAAGAAAGGTTCGGTGAGGTCCACCA 480 Query 468 TCGTCGTAGCCGCCGGAACCACCACTGGAGAGAGAGTTTCCGCCGCCGTGTAGGTCTCTT 527 ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 481 TCGTCGTCGCCACCGGAACCACCACAGGAGAGAGAGTTTCCGCCGCCGTGTAGGTCTCTT 540 Query 528 T-ACATATATTATGTAATATCGGTAATGATTGTATTATATGCCTGGTTCTTGTAATTTTA 586 | |||||| |||| || |||||||||||||||||||||||| | ||||||| ||| | Sbjct 541 TTACATATGTTATATATTATCGGTAATGATTGTATTATATG---G-TTCTTGT--TTT-A 593 Query 587 TGTATAAAAAGCATTGAGGA-T-T-GACTGTGATTAACCATGTTAATCATCCTATAAACT 643 |||||||||||||||||| | | | |||||||||||||||||||||||||||| ||||| Sbjct 594 TGTATAAAAAGCATTGAGCACTATTGACTGTGATTAACCATGTTAATCATCCTTTAAACC 653 Query 644 TTGCTTTTAATCTTAAGAATTATTGTGTTTTGCATATTAATTATTAGATTTGTGTTCTAC 703 |||||||| ||||||||||||||||| || ||||||||||||| |||||||||||||| Sbjct 654 TTGCTTTTGATCTTAAGAATTATTGTATTATGCATATTAATTA---GATTTGTGTTCTAC 710 Query 704 TGATTATTCT 713 |||||||||| Sbjct 711 TGATTATTCT 720 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34561093136 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5