BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472576
Length=2087
Score E
Sequences producing significant alignments: (Bits) Value
AT1G23190.1 | Symbols: PGM3 | Phosphoglucomutase/phosphomannomu... 3190 0.0
AT1G70730.3 | Symbols: PGM2 | Phosphoglucomutase/phosphomannomu... 1921 0.0
> AT1G23190.1 | Symbols: PGM3 | Phosphoglucomutase/phosphomannomutase
family protein | chr1:8219869-8224469 FORWARD LENGTH=2112
Length=2112
Score = 3190 bits (1727), Expect = 0.0
Identities = 1959/2068 (95%), Gaps = 27/2068 (1%)
Strand=Plus/Plus
Query 3 AATTTTGATCTTTGTTC-TCTTC-AAGACGAATATGGTTTTCAAGGTTTCTACCGTTTCA 60
||||||||||||||||| || || ||| |||||||||||||||||||||||||||| ||
Sbjct 47 AATTTTGATCTTTGTTCTTC-TCAAAG-CGAATATGGTTTTCAAGGTTTCTACCGTATCC 104
Query 61 ACATCTCCTATTGATGGCCAGAAACCAGGAACTTCTGGTCTCCGTAAGAAGGTGAAAGTG 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 105 ACATCTCCTATTGATGGCCAGAAACCAGGAACTTCTGGTCTTCGTAAGAAGGTGAAAGTG 164
Query 121 TTCAAGCAACCCAATTATCTAGAGAATTTTGTGCAAGCAACATTCAATGCTCTTACGGCG 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 165 TTCAAGCAACCCAATTATCTAGAGAATTTTGTCCAAGCAACATTCAATGCTCTTACGGCG 224
Query 181 CAGAAGGTTAAAGGTGCCACTCTTGTGGTCTCCGGTGATGGTCGTTATTATTCAAAGGAT 240
|||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct 225 GAGAAAGTTAAAGGTGCCACACTTGTGGTCTCTGGTGATGGTCGTTATTACTCAAAGGAT 284
Query 241 GCTGTTCAGATCATAATTAAGATGGCAGCAGCTAATGGTGTACGGA-GTGTGTGGGTTGG 299
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 285 GCTGTTCAGATCATAATTAAGATGGCAGCAGCTAATGGTGTAC-GACGTGTGTGGGTTGG 343
Query 300 TAAAAACACTCTGTTATCAACTCCTGCTGTATCAGCTGTGATTCGTGAAAGATCAGGGGC 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 TAAAAACACTCTGTTATCAACTCCTGCTGTATCAGCTGTGATTCGTGAAAGATCAGGGGC 403
Query 360 TGATGGATCGAAAGCAACTGGAGCCTTTATCTTAACAGCAAGTCACAATCCTGGTGGCCC 419
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 404 TGATGGATCGAAAGCAACTGGAGCATTTATCTTAACAGCAAGCCACAATCCTGGTGGCCC 463
Query 420 TACTGAGGATTTTGGAATCAAATACAATATGGAAAACGGAGGACCTGCTCCTGAATCAAT 479
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 464 TACTGAGGATTTTGGAATCAAATACAATATGGAAAATGGAGGACCTGCTCCTGAATCAAT 523
Query 480 CACTGATAAAATTTACGAGAACACTAAGACAATCAAGGAGTACCCAATAGCAGACGATCT 539
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 524 CACTGATAAAATTTACGAGAACACTAAGACAATCAAGGAGTACCCAATAGCACAAGATCT 583
Query 540 ACCCAATGTTGATATTTCTACCATCGGTGTAACTAGCTTTGAAGGACCTGATGGCAAATT 599
||||||||||||||||||| | | |||||||| || |||||||||||||| || |||||
Sbjct 584 ACCCAATGTTGATATTTCTGCTGTTGGTGTAACCAGTTTTGAAGGACCTGAAGGAAAATT 643
Query 600 TGATGTTGAAGTTTTCGACT-CTGCAGATGACTACGTTAAATTGATGAAGTCAATCTTCG 658
||||||||||||||| || | | |||||||||||||||||||| ||||||||||||||||
Sbjct 644 TGATGTTGAAGTTTTTGA-TCCCGCAGATGACTACGTTAAATTAATGAAGTCAATCTTCG 702
Query 659 ATTTTGAATCAATCCGGAAATTGCTTTCATCTCCAAAGTTTACATTCTGCTATGATGCAT 718
|||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 703 ATTTTGAAGCCATCCGGAAATTGCTATCATCTCCAAAGTTTACATTCTGCTATGATGCAT 762
Query 719 TGCATGGAGTTGCTGGAGCCTATGCACATCGCATTTTTGTCGAAGAACTCGGTGCGCAAG 778
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 763 TGCATGGAGTTGCTGGAGCCTATGCACATCGCATCTTTGTCGAAGAACTCGGTGCGCAAG 822
Query 779 AAAGCGCATTATTGAACTGCACACCCAAGGAGGACTTTGGAGGAGGGCATCCGGATCCCA 838
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 823 AAAGCGCATTATTGAACTGCACTCCCAAGGAGGACTTTGGAGGAGGGCATCCGGATCCCA 882
Query 839 ATTTGACCTATGCTAAGGAGCTTGTGGCACGAATGGGACTAAGTAAATCCGACACTGGAG 898
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 883 ATTTGACCTATGCTAAGGAGCTTGTGGCACGAATGGGATTAGGTAAATCCGACACTGGAG 942
Query 899 GTGAACCTCCAGAGTTTGGCGCCGCTGCTGATGGTGATGCAGACCGTAACATGATCCTTG 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 943 GTGAACCTCCAGAGTTTGGCGCCGCTGCTGATGGTGATGCAGACCGTAACATGATCCTTG 1002
Query 959 GTAAAAGGTTTTTTGTAACTCCTTCAGATTCAGTTGCCATAATTGCTGCAAATGCTATTG 1018
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1003 GTAAAAGGTTCTTTGTAACTCCTTCGGATTCAGTTGCCATAATTGCTGCAAATGCTATTG 1062
Query 1019 GGGCCATTCCGTACTTCAGCTCTGGTTTGAAAGGTGTTGCTAGGAGTATGCCCACCTCAG 1078
| ||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 1063 GTGCCATCCCGTACTTCAGCTCTGGTTTGAAAGGTGTTGCAAGGAGCATGCCAACCTCAG 1122
Query 1079 CTGCTCTCGATGTCGTTGCAAAAAGCTTGAATTTGAAGTTCTTTGAGGTTCCAACAGGCT 1138
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1123 CTGCTCTTGATGTCGTTGCAAAAAGCTTGAATTTGAAGTTCTTTGAGGTTCCAACAGGCT 1182
Query 1139 GGAAGTTTTTTGGTAATCTGATGGATGCTGGGATGTGTTCTGTTTGTGGGGAAGAAAGTT 1198
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1183 GGAAGTTTTTTGGTAATCTGATGGATGCTGGGATGTGTTCTGTTTGTGGAGAAGAAAGTT 1242
Query 1199 TTGGAACCGGCTCGGATCATATCCGCGAGAAAGACGGGATTTGGGCAGTTCTTGCGTGGA 1258
||||||| ||||||||||||||||| ||||||||||| || |||||||||||||| ||||
Sbjct 1243 TTGGAACTGGCTCGGATCATATCCGTGAGAAAGACGGAATATGGGCAGTTCTTGCATGGA 1302
Query 1259 TGTCCATACTTGCTCACAAGAACAAGGGAAATATTGACGGTAATGCTAAACTGGTGTCGG 1318
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1303 TGTCTATACTTGCTCACAAGAACAAGGGAAATATTGACGGTAACGCTAAACTGGTGTCAG 1362
Query 1319 TTGAAGACATTGTCCGCCAGCATTGGGCTACCTACGGCCGTCACTATTACACTCGTTACG 1378
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1363 TTGAAGACATTGTCCGCCAGCATTGGGCTACCTACGGTCGTCACTATTACACTCGTTACG 1422
Query 1379 ACTATGAGAATGTAGACGCAGGTAAAGCTAAGGAACTGATGGAGCATTTGGTCAAATTGC 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1423 ACTATGAGAATGTAGACGCAGGTAAAGCTAAGGAACTGATGGAGCATTTGGTCAAATTGC 1482
Query 1439 AATCTTCAATTCCTGAAGTTAACAAGATTGTGAAAGGAATTCGTTCCGATGTGGCGAA-C 1497
|||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |
Sbjct 1483 AATCTTCAATTCCTGAAGTTAACAAGATTGTGAAAGGAATTCGTTCGGACGTGGC-AAGC 1541
Query 1498 GTCGCCGGTGCCGATGAATTCGAGTACAAAGATCCAGTTGATGGATCCATTTCGAAGCAC 1557
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1542 GTCGCCAGTGCTGATGAATTCGAGTACAAAGATCCAGTTGATGGATCCATTTCGAAGCAC 1601
Query 1558 CAGGGAATCCGTTACTTGTTTGAAGACGGATCACGACTTGTTTTCCGTCTCTCTGGAACT 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1602 CAGGGAATCCGTTACTTGTTTGAAGACGGATCACGACTTGTTTTCCGTCTCTCTGGAACT 1661
Query 1618 GGCTCAGAAGGAGCAACCATCAGGCTCTACATTGAACAGTACGAGAAGGATGCTTCAAAA 1677
||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||
Sbjct 1662 GGCTCAGAAGGAGCAACCATCCGGCTTTACATCGAACAGTACGAAAAGGATGCTTCAAAA 1721
Query 1678 ACCGGCCGAGAATCCCAGGAAGCTTTGTCTCCTCTGGTTGACTTAGCTCTAAAGCTGTCT 1737
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 ACCGGCCGAGAATCCCAGGAAGCTTTGTCTCCTCTGGTTGACTTAGCTCTAAAGCTGTCG 1781
Query 1738 AAGATGGAGGAGTTCACCGGCCGATCAGCCCCAACCGTCATAACATGAGAATGGTCAAGC 1797
|||||||| |||||||| |||||||||||||| ||||||||||||| |||| ||||||||
Sbjct 1782 AAGATGGAAGAGTTCACAGGCCGATCAGCCCCCACCGTCATAACATAAGAAGGGTCAAGC 1841
Query 1798 TCAACGACTCGAATCATACACttttttttCCTGCATCTATATGATGCTTTCTTCTTATAC 1857
|||||||||| || ||| ||| |||| | | ||||||||||| |||||||||||||
Sbjct 1842 TCAACGACTCAAACCATTCACCTTTT---C--G--TCTATATGATGTTTTCTTCTTATAC 1894
Query 1858 TATCCAAGTTCCATTGTAAGAATAATTAGTCTCAGGGAGAATTTGTATCTCTTATCGGAA 1917
|||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct 1895 TATCCAAGTTACATTATAAGAATAATTAGTCTCAGGGAGAATTTGTATTTCTCATCAGAA 1954
Query 1918 TTCTGAACAACCAAGAAC-GATTTCTTGAGTTGTCGTGAGGCTTATACATACTTGTACGG 1976
|||||||||||||||| | ||||||||||||||| ||||||||||||| | | ||||||
Sbjct 1955 TTCTGAACAACCAAGA-CTGATTTCTTGAGTTGTTGTGAGGCTTATAC-T--T-GTACGG 2009
Query 1977 ATTTGGCTTTCTCGGTTTTGTTTTCTCTTGTTTCCATCTTTTGGCG-GTTTTATATTCTC 2035
||||||||||||| |||||||| |||||||||||| | |||||||| || ||| ||||
Sbjct 2010 ATTTGGCTTTCTCAGTTTTGTTCTCTCTTGTTTCCGTATTTTGGCGAGT---ATACTCTC 2066
Query 2036 TTAACATCTAACCTCATTGATACCTCAA 2063
||||||||||| |||||||||||||||
Sbjct 2067 TTAACATCTAAGTTCATTGATACCTCAA 2094
> AT1G70730.3 | Symbols: PGM2 | Phosphoglucomutase/phosphomannomutase
family protein | chr1:26669020-26673166 REVERSE LENGTH=1989
Length=1989
Score = 1921 bits (1040), Expect = 0.0
Identities = 1529/1764 (87%), Gaps = 37/1764 (2%)
Strand=Plus/Plus
Query 40 TTCAAGGTTTCTAC-CGTTTCAACATCTCCTATTGATGGCCAGAAACCAGGAACTTCTGG 98
|||||||| ||| | ||| || || || |||||||||||||||||||| || ||||||||
Sbjct 241 TTCAAGGTCTCT-CTCGTCTCTACTTCGCCTATTGATGGCCAGAAACCTGGGACTTCTGG 299
Query 99 TCTCCGTAAGAAGGTGAAAGTGTTCAAGCAACCCAATTATCTAGAGAATTTTGTGCAAGC 158
||||||||||||||||||||||| |||||||| ||||| || || |||||||| || ||
Sbjct 300 ACTCCGTAAGAAGGTGAAAGTGTTTAAGCAACCAAATTACCTTGAAAATTTTGTCCAGGC 359
Query 159 AACATTCAATGCTCTTACGGC-GCAGAAGGTTAAAGGTGCCACTCTTGTGGTCTCCGGTG 217
||| |||||||||||||| | | |||| ||||||||||| || |||||||| || ||||
Sbjct 360 AACGTTCAATGCTCTTACTACAG-AGAAAGTTAAAGGTGCGACACTTGTGGTTTCTGGTG 418
Query 218 ATGGTCGTTATTATTCAAAGGATGCTGTTCAGATCATAATTAAGATGGCAGCAGCTAATG 277
||||||||||||||||| || | ||| ||||||| ||| | |||||||||||||||||||
Sbjct 419 ATGGTCGTTATTATTCAGAGCAAGCTATTCAGATTATAGTAAAGATGGCAGCAGCTAATG 478
Query 278 GTG-TACGGA-GTGTGTGGGTTGGTAAAAACACTCTGTTATCAACTCCTGCTGTATCAGC 335
||| || || |||||||||||||| |||||| |||| ||||||||||||| ||||||||
Sbjct 479 GTGTTA--GACGTGTGTGGGTTGGTCAAAACAGTCTGCTATCAACTCCTGCAGTATCAGC 536
Query 336 TGTGATTCGTGAAAGA-TCAGGGGCTGATGGATCGAAAGCAACTGGAGCCTTTATCTTAA 394
| | |||||||||||| | ||||||||||||||| ||||| || ||||| ||||||||||
Sbjct 537 TATTATTCGTGAAAGAGT-AGGGGCTGATGGATCTAAAGCCACAGGAGCATTTATCTTAA 595
Query 395 CAGCAAGTCACAATCCTGGTGGCCCTACTGAGGATTTTGGAATCAAATACAATATGGAAA 454
|||||||||| |||||||||||||| ||||||||||| ||||| || |||||||||||||
Sbjct 596 CAGCAAGTCATAATCCTGGTGGCCCAACTGAGGATTTCGGAATTAAGTACAATATGGAAA 655
Query 455 ACGGAGGACCTGCTCCTGAATCAATCACTGATAAAATTTACGAGAACACTAAGACAATCA 514
| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 656 ATGGTGGACCAGCTCCTGAATCAATCACTGATAAGATTTACGAGAACACAAAGACAATCA 715
Query 515 AGGAGTACCCAATAGCAGACGATCTACCCAATGTTGATATTTCTACCATCGGTGTAACTA 574
|||||||||||||||| || |||||||||| |||||||||||||| || ||| |||| |
Sbjct 716 AGGAGTACCCAATAGCGGAAGATCTACCCAGGGTTGATATTTCTACTATTGGTATAACCA 775
Query 575 GCTTTGAAGGACCTGATGGCAAA-TTTGATGTTGAAGTTTTCGACTCTGCAGATGACTAC 633
|||||||||||||||| || ||| ||||| || |||||||| || ||||||||||||||
Sbjct 776 GCTTTGAAGGACCTGAAGG-AAAGTTTGACGTCGAAGTTTTTGATTCTGCAGATGACTAT 834
Query 634 GTTAAATTGATGAAGTCAATCTTCGATTTTGAATCAATCCGGAAATTGCTTTCATCTCCA 693
|||||| | ||||||||||||||||| |||||||| ||| ||||||||| || | ||||
Sbjct 835 GTTAAACTAATGAAGTCAATCTTCGACTTTGAATCCATCAAGAAATTGCTATCTTATCCA 894
Query 694 AAGTTTACATTCTGCTATGATGCATTGCATGGAGTTGCTGGAGCCTATGCACATCGCATT 753
|| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 895 AAATTTACTTTCTGCTATGATGCATTGCATGGAGTGGCTGGAGCATATGCACATCGCATC 954
Query 754 TTTGTCGAAGAACTCGGTGCGCAAGAAAGCGCATTATTGAACTGCACACCCAAGGAGGAC 813
|||||||||||||| ||||| | |||||| | || ||||||||| |||||||||||||
Sbjct 955 TTTGTCGAAGAACTAGGTGCACCAGAAAGTTCGTTGTTGAACTGCGTACCCAAGGAGGAC 1014
Query 814 TTTGGAGGAGGG-CATCCGGATCCCAAT-TTGACCTATGCTAAGGAGCTTGTGGCACGAA 871
|||||||| ||| || |||||||||||| || ||||||||||||||||| |||||||| |
Sbjct 1015 TTTGGAGG-GGGCCACCCGGATCCCAATCTT-ACCTATGCTAAGGAGCTCGTGGCACGCA 1072
Query 872 TGGGACTAAGTAAATCCGA-CA--CTGGAGGTGAACCTCCAGAGTTTGGCGCCGCTGCTG 928
||||| | |||||| | || | |||| || || |||||||||||||||||||||||||
Sbjct 1073 TGGGATTGAGTAAAACTGATGATGCTGGTGGCGAGCCTCCAGAGTTTGGCGCCGCTGCTG 1132
Query 929 ATGGTGATGCAGACCGTAACATGATCCTTGGTAAAAGGTTTTTTGTAACTCCTTCAGATT 988
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 1133 ATGGTGATGCAGACCGAAACATGATCCTCGGTAAAAGGTTTTTCGTAACTCCTTCGGATT 1192
Query 989 CAGTTGCCATAATTGCTGCAAATGCTATTGGGGCCATTCCGTACTTCAGCTCTGGTTTGA 1048
||||||| |||||||||||||||||| |||||||||| || ||||||||||||||||| |
Sbjct 1193 CAGTTGCTATAATTGCTGCAAATGCTGTTGGGGCCATACCATACTTCAGCTCTGGTTTAA 1252
Query 1049 AAGGTGTTGCTAGGAGTATGCCCACCTCAGCTGCTCTCGATGTCGTTGCAAAAAGCTTGA 1108
|||||||||||||||| ||||| ||||||||||| || |||||||||||||||| ||||
Sbjct 1253 AAGGTGTTGCTAGGAGCATGCCGACCTCAGCTGCACTTGATGTCGTTGCAAAAAACTTGG 1312
Query 1109 ATTTGAAGTTCTTTGAGGTTCCAACAGGCTGGAAGTTTTTTGGTAATCTGATGGATGCTG 1168
||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||
Sbjct 1313 GTTTGAAGTTCTTTGAGGTTCCAACAGGCTGGAAATTCTTTGGCAATCTAATGGATGCTG 1372
Query 1169 GGATGTGTTCTGTTTGTGGGGAAGAAAGTTTTGGAACCGGCTCGGATCATATCCGCGAGA 1228
||||||| ||||| || || |||||||||||||||||||| |||||||||||||| ||||
Sbjct 1373 GGATGTGCTCTGTATGCGGAGAAGAAAGTTTTGGAACCGGTTCGGATCATATCCGTGAGA 1432
Query 1229 AAGACGGGATTTGGGCAGTTCTTGCGTGGATGTCCATACTTGCTCACAAGAACAAGGGAA 1288
|||| ||||| |||||||||||||| ||| | || ||||| |||||||||||||||| ||
Sbjct 1433 AAGATGGGATCTGGGCAGTTCTTGCTTGGCTATCAATACTGGCTCACAAGAACAAGG-AA 1491
Query 1289 ATA-TTGACGGTAATGCTAAACTGGTGTCGGTTGAAGACATTGTCCGCCAGCATTGGGCT 1347
| |||| || ||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 1492 ACCCTTGATGGGAATGCAAAACTGGTGACGGTTGAAGACATTGTCCGCCAGCACTGGGCT 1551
Query 1348 ACCTACGGCCGTCACTATTACACTCGTTACGACTATGAGAATGTAGACGCAGGTAAAGCT 1407
|| || |||||||||||||||||||| |||||||||||||| ||||||||| | ||||
Sbjct 1552 ACATATGGCCGTCACTATTACACTCGATACGACTATGAGAACGTAGACGCAACTGCAGCT 1611
Query 1408 AAGGAACTGATGG-AGCATTTGGTCAAATTGCAATCTTCAATTCCTGAAGTTAACAAGAT 1466
|| ||||| |||| | | |||||| || |||||||||||| |||| ||||| ||||||||
Sbjct 1612 AAAGAACTCATGGGA-CTTTTGGTTAAGTTGCAATCTTCACTTCCCGAAGTCAACAAGAT 1670
Query 1467 TGTGAAAGG-AATTCGTTCC-GATGTGGCGAACGTCGCCGGTGCCGATGAATTCGAGTAC 1524
| | ||||| ||||| | || || ||||| || || || | || ||||| |||||||||
Sbjct 1671 TAT-AAAGGGAATTCAT-CCAGAGGTGGCAAATGTTGCAAGCGCAGATGAGTTCGAGTAC 1728
Query 1525 AAAGATCCAGTTGATGGATCCATTTCGAAGCACCA-GGGAATCCGTTACTTGTTTGAAGA 1583
||||||||||| ||||| || |||| |||||||| |||| |||| ||||| || || ||
Sbjct 1729 AAAGATCCAGTAGATGGCTCTGTTTCAAAGCACCAAGGGA-TCCGATACTTATTCGAGGA 1787
Query 1584 CGGATCACGACTTGTTTTCCGTCTCTCTGGAACTGGCTCAGAAGGAGCAACCATCAGGCT 1643
|||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 1788 TGGATCACGACTTGTGTTCCGTCTCTCGGGAACTGGCTCAGAAGGAGCAACAATAAGGCT 1847
Query 1644 CTACATTGAACAGTACGAGAAGGATGCTTCAAAAACCGGCCGAGAATCCCAGGAAGCT-T 1702
||||||||||| ||||||||||| || ||||| | ||||||||| || ||||| ||| |
Sbjct 1848 ATACATTGAACAATACGAGAAGGACGCCTCAAAGATCGGCCGAGATTCTCAGGATGCTCT 1907
Query 1703 TG-TCTCCTCTGGTTGAC-TTAGC-TCTAAAGCTGTCTAAGATGGAGGAGTTCACCGGCC 1759
|| || || |||||||| || || | |||||||||| || ||| | |||||||||||||
Sbjct 1908 TGGTC-CC-CTGGTTGATGTT-GCAT-TAAAGCTGTCGAAAATGCAAGAGTTCACCGGCC 1963
Query 1760 GATCAGCCCCAACCGTCATAACAT 1783
||||| | ||||| || || ||||
Sbjct 1964 GATCATCACCAACTGTTATTACAT 1987
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103463323245
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5