BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472589
Length=1978
Score E
Sequences producing significant alignments: (Bits) Value
AT1G23310.1 | Symbols: GGT1, AOAT1, GGAT1 | glutamate:glyoxylat... 3018 0.0
AT1G70580.1 | Symbols: AOAT2, GGT2 | alanine-2-oxoglutarate ami... 1622 0.0
> AT1G23310.1 | Symbols: GGT1, AOAT1, GGAT1 | glutamate:glyoxylate
aminotransferase | chr1:8268416-8271933 REVERSE LENGTH=2086
Length=2086
Score = 3018 bits (1634), Expect = 0.0
Identities = 1811/1896 (96%), Gaps = 13/1896 (1%)
Strand=Plus/Plus
Query 1 GCATAAAAACGAGACACGGATAGATAGATATCGTGAACTGACTTTTGTCTGACAAATCGT 60
|||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| |
Sbjct 1 GCATAAAAACGAGACACGGATATAGAGATATCGTGAATTGACTTTTGTCTGACAAATCCT 60
Query 61 CTTCGTCAATTTCAGTGGCTCTGCTGCTTCCTTTGTTGTGAAGCCACAT-GATTGGATTG 119
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 61 CTTCGTCAATTTCAGTGGCTCTGCTGCTTCCTTTGTTGTGAAGCCACATAGATTAGATTG 120
Query 120 AGGAATGATCCAAATTCATGTCATACACACAATTGTAATCTGCTACACAAAATACTTTTT 179
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 121 AGGAATGATCCAAACTCATGTCATACACACATTTGTAATCTGCTACACAAAATAC-TTTT 179
Query 180 AAAGTCACACACACTAATATTTTAACTCTACCCACTCTTT-TCTTG-CCTTTGCTCTTCA 237
||| ||||||||||||||||||||||||| |||||||||| |||| |||| ||||| |
Sbjct 180 AAAATCACACACACTAATATTTTAACTCTCCCCACTCTTTGCCTTGCCCTTGGCTCTAGA 239
Query 238 ACCAAACGTGACTCTCCAGATAGACTTTTGGGGTCACAACATTGTGTTTGAAGAGGAGGG 297
||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 240 ACCGAACGTGACTCTCCAGATAGACTTTTGGAGTCACAACATTGAGTTTGAAGAGGAGGG 299
Query 298 TAGAAGTGAGCTAGCGATTGCTTAAGAGTGAACATAAATGGCTCTCAAGGCATTAGACTA 357
||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 300 AAGAAGTGAGCTAGGGATTGGTTCAGAGTGAACATAAATGGCTCTCAAGGCATTAGACTA 359
Query 358 CGATACTCTGAATGAAAACGTCAAGAAGTGTCAATATGCCGTCAGAGGTGAACTCTATCT 417
||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct 360 CGATACTCTGAATGAAAACGTCAAGAAGTGTCAGTATGCCGTAAGAGGTGAACTTTATCT 419
Query 418 CCGAGCTTCTGAGCTTCAGAAAGAAGGCAAAAAGATTATCTTCACAAACGTTGGGAACCC 477
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 420 CCGAGCTTCTGAGCTGCAGAAAGAAGGCAAAAAGATTATTTTCACAAACGTTGGGAACCC 479
Query 478 TCACGCTTTAGGACAGAAGCCATTGACATTTCCTCGCCAGGTGGTTGCGCTTTGCCAAGC 537
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TCATGCTTTAGGACAGAAGCCATTGACATTTCCTCGCCAGGTGGTTGCGCTTTGCCAAGC 539
Query 538 TCCGTTTCTACTAGATGACCCCAATGTTGGAATGCTATTTCCAGCTGATGCTATTGCAAG 597
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 540 TCCGTTTCTACTAGATGACCCAAATGTTGGAATGCTATTTCCAGCTGATGCTATTGCAAG 599
Query 598 AGCTAAGCATTATCTTTCCTTGACTTCAGGCGGTTTAGGTGCTTACAGTGACTCAAGAGG 657
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 600 AGCTAAACATTATCTTTCCTTGACTTCAGGCGGTTTAGGTGCTTACAGTGATTCAAGAGG 659
Query 658 CCTTCCAGGAGTTAGGAAAGAGGTTGCTGAGTTCATTCAACGGCGTGATGGCTATCCAAG 717
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 660 CCTTCCAGGAGTTAGGAAAGAGGTTGCTGAGTTCATTCAACGGCGTGATGGGTATCCAAG 719
Query 718 TGACCCAGAACTCATCTTTCTCACTGATGGAGCTAGCAAAGGTGTGATGCAAATCTTGAA 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TGACCCAGAACTCATCTTTCTCACTGATGGAGCTAGCAAAGGTGTGATGCAAATCTTGAA 779
Query 778 CTGTGTTATACGCGGTGATGGAGACGGGATTCTAGTTCCGGTTCCACAGTATCCACTCTA 837
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 780 TTGTGTTATACGCGGTAATGGAGATGGGATTCTAGTTCCGGTTCCACAGTATCCACTTTA 839
Query 838 CTCAGCTACCATATCACTGTTAGGTGGTACTCTTGTTCCTTACTATCTTGATGAGTCTGA 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 CTCAGCTACCATATCACTGTTAGGTGGTACTCTTGTTCCTTACTATCTTGATGAGTCTGA 899
Query 898 AAACTGGGGACTTGATGTTAATAACCTTCGACAATCCGTTGCTCAGGCTCGTTCTCAAGG 957
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 900 AAACTGGGGACTTGATGTTGCTAACCTTCGACAATCCGTTGCTCAGGCTCGTTCTCAAGG 959
Query 958 GATAACTGTAAGGGCAATGGTGATCATTAACCCTGGGAACCCAACTGGTCAGTGTCTAAG 1017
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 960 GATAACAGTAAGGGCAATGGTGATCATTAACCCTGGGAACCCAACTGGCCAGTGTCTAAG 1019
Query 1018 CGAAGCTAACATAAGAGAGATATTGAAGTTCTGTTATAACGAGAAATTGGTTCTTCTGGG 1077
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1020 CGAAGCTAACATAAGAGAGATATTGAAGTTCTGTTATAACGAGAAACTGGTTCTTCTGGG 1079
Query 1078 AGACGAGGTTTATCAGCAGAACATATATCAGGATGAGCGTCCCTTTATCAGCTCCAAGAA 1137
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1080 AGACGAGGTTTATCAGCAGAACATATACCAGGATGAGCGTCCCTTTATCAGCTCCAAGAA 1139
Query 1138 GGTTTTGATGGAAATGGGTTCACCGTTCAGCAAGGGAGTTCAGCTTGTATCTTTTCACAC 1197
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 1140 GGTTTTGATGGAAATGGGTTCGCCGTTCAGCAAGGAAGTTCAGCTTGTATCTTTTCACAC 1199
Query 1198 AGTCTCTAAAGGATATTGGGGCGAATGTGGACAGCGAGGTGGATACTTTGAGATGACCAA 1257
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1200 AGTCTCTAAAGGATATTGGGGTGAATGTGGACAGCGAGGTGGATACTTTGAGATGACCAA 1259
Query 1258 CCTCCCTCCAAGGGTTGTTGAGGAGATATACAAGGTTTCATCAATTGCCCTCAGCCCCAA 1317
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1260 CCTCCCTCCAAGGGTTGTTGAGGAGATATACAAGGTTGCATCAATTGCCCTCAGCCCTAA 1319
Query 1318 TGTCCCTGCCCAGATCTTTATGGGTTTGATGGTTAGTCCTCCAAAGCCTGGAGACATTTC 1377
|||| |||| || |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1320 TGTCTCTGCGCAAATCTTTATGGGTTTGATGGTTAATCCTCCAAAGCCTGGAGACATTTC 1379
Query 1378 ATATGACCAGTTCACCCGTGAAAGCAAGGGGACTCTTGAATCTTTGAGAAGAAGAGCAAG 1437
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1380 ATATGACCAGTTCGCCCGTGAAAGCAAGGGGATTCTTGAATCTTTGAGAAGAAGAGCAAG 1439
Query 1438 AATCATGACTGATGGATTCAACAGCTGCAAAAACATCGTGTGCAATTTCACAGAAGGTGC 1497
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1440 GCTCATGACAGATGGATTCAACAGCTGCAAAAACGTCGTGTGCAATTTCACAGAAGGTGC 1499
Query 1498 AATGTATTCGTTTCCTCAAATACGGCTACCACCGGGAGCTATCCAAGCTGCAAAACAAGC 1557
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct 1500 AATGTATTCGTTTCCTCAAATACGGTTACCAACGGGAGCTCTCCAAGCTGCAAAACAAGC 1559
Query 1558 CGGAAAAGTGCCAGACGTTTTCTACTGTCTCAAGCTCTTAGAAGCCACAGGAATCTCCAC 1617
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 TGGAAAAGTGCCAGACGTTTTCTACTGTCTCAAGCTCTTAGAAGCCACAGGAATCTCCAC 1619
Query 1618 AGTACCTGGCTCTGGGTTTGGACAGAAAGAAGGTGTGTTCCATCTGAGGACAACGATCCT 1677
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1620 AGTACCTGGCTCTGGATTTGGACAGAAAGAAGGTGTGTTCCATCTGAGGACAACAATCCT 1679
Query 1678 GCCAGCAGAAGAAGAGATGCCGGAAATCATGGATAGTTTCAAGAAGTTCAACGACGAGTT 1737
|||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1680 GCCAGCAGAAGATGAGATGCCGGAGATCATGGATAGCTTCAAGAAGTTCAACGACGAGTT 1739
Query 1738 CATGACTCAGTATGATAATAACGTTGGTTATTCGAGAATGTGATTACTTCTTCAGTTCTT 1797
|||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct 1740 CATGACTCAGTATGATAATAACTTTGGTTATTCGAAAATGTGATTACTTCTTC--TTCTG 1797
Query 1798 CTAAACAACTATTGTGCTCAGCTACACTCTTTAAAGCTAAATCTCTGTAGTACACTCTTT 1857
|| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1798 --AA-CGACTATTGTGTTCTGCTACACTCTTTAAAGCTAAATCTCTGTAGTACACTCTTT 1854
Query 1858 CT-TTCTGTCCTATTCTATAAAc--tctctctctct 1890
|| || || |||||||||||||| | |||||||||
Sbjct 1855 CTCTT-TGCCCTATTCTATAAACCATATCTCTCTCT 1889
> AT1G70580.1 | Symbols: AOAT2, GGT2 | alanine-2-oxoglutarate aminotransferase
2 | chr1:26612719-26616069 FORWARD LENGTH=1795
Length=1795
Score = 1622 bits (878), Expect = 0.0
Identities = 1265/1455 (87%), Gaps = 14/1455 (1%)
Strand=Plus/Plus
Query 333 AAATGGCTCTCAAGGCATTAGACTACGA-TACTCTGAATGAAAACGTCAAGAAGTGTCAA 391
||||| |||||||||| ||||||||||| | || ||||||||||||| ||||| |||||
Sbjct 124 AAATGTCTCTCAAGGCGTTAGACTACGAGTCCT-TGAATGAAAACGTGAAGAATTGTCAG 182
Query 392 TATGCCGTCAGAGGTGAACTCTATCTCCGAGCTTCTGAGCTTCAGAAAGAAGGCAAAAAG 451
||||| |||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct 183 TATGCAGTCAGAGGTGAACTTTATCTTCGTGCTTCTGAGCTTCAGAAAGAAGGCAAAAAG 242
Query 452 ATTATCTTCACAAACGTTGGGAACCCTCACGCTTTAGGACAGAAGCCAT-TGACATTTCC 510
||||| |||||||| ||||| |||||||| |||||||||||||| || | |||| |||||
Sbjct 243 ATTATTTTCACAAATGTTGGAAACCCTCATGCTTTAGGACAGAAACC-TCTGACTTTTCC 301
Query 511 TCGCCAGGTGGTTGCGCTT-TGCCAAGCTCCGTTTCTACTAGATGACCCCAATGTTGGAA 569
||| ||||||||| | || |||||||| || ||||| ||||||| || |||||||| |
Sbjct 302 TCGTCAGGTGGTTTC-TTTATGCCAAGCACCATTTCTGTTAGATGATCCAAATGTTGGTA 360
Query 570 TGCTATTTCCAGCTGATGCTATTGCAAGAGCTAAGCATTATCTTTCCTTGACTTCAGGCG 629
|| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 361 TGATATTCCCAGCAGATGCTATTGCAAGAGCTAAGCATTATCTTTCCTTGACTTCTGGTG 420
Query 630 GT-TTAGGTGCTTACAGTGACTCAAGAGGCCTTCCAGGAGTTAGGAAAGAGGTTGCTGAG 688
|| || ||||||||||||||||||||||| ||||| |||||| ||||||| || ||||||
Sbjct 421 GTCTT-GGTGCTTACAGTGACTCAAGAGGTCTTCCGGGAGTTCGGAAAGAAGTCGCTGAG 479
Query 689 TTCATTCAACGGCGTGATGGCTATCCAAGTGACCCAGAACTCATCTTTCTCACTGATGGA 748
|||||| ||||||||||||| |||||||| || ||||||||||| ||||| |||||||||
Sbjct 480 TTCATTGAACGGCGTGATGGATATCCAAGCGATCCAGAACTCATATTTCTAACTGATGGA 539
Query 749 GCTAGCAAAGGTGTGATGCAAATCTTGAACTGTGTTATACGCGGTGATGGA-GACGGGAT 807
|| |||||||||||||||||||||||||| ||||| ||||||||| | | | ||||| ||
Sbjct 540 GCGAGCAAAGGTGTGATGCAAATCTTGAATTGTGTCATACGCGGTCA-GAAAGACGGAAT 598
Query 808 TCTAGTTCCGGTTCCACAGTATCCACTCTACTCAGCTACCATATCACTGTTAGGTGGTAC 867
||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 599 TCTGGTTCCAGTTCCACAGTATCCACTCTACTCGGCTACTATATCTCTGTTAGGTGGTAC 658
Query 868 TCTTGTTCCTTACTATCTTGATGAGTCTGAAAACTGGGGACTTGATGTTAATAACCTTCG 927
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 659 TCTTGTTCCTTACTATCTTGAAGAGTCTGAAAACTGGGGACTTGATGTTAACAACCTTCG 718
Query 928 ACAATCCGTTGCTCAGGCTCGTTCTCAAGGGATAACTGTAAGGGCAATGGTGATCATTAA 987
||||| |||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||
Sbjct 719 CCAATCTGTTGCTCAAGCTCGCTCTCAAGGAATAACAGTAAGGGCAATGGTGATTATTAA 778
Query 988 CCCTGGGAACCCAACTGGTCAGTGTCTAAGCGAAGCTAACATAAGAGAGATATTGAAG-T 1046
||| || ||||||||||| |||||||| |||||||||||||||||||||||| | | | |
Sbjct 779 CCCCGGAAACCCAACTGGCCAGTGTCTTAGCGAAGCTAACATAAGAGAGATACT-ACGGT 837
Query 1047 TCTGTTATAACGAGAAATTGGTTCTTCTGGGAGACGAGGTTTATCAGCAGAACATATATC 1106
|||||| | | |||| ||| |||||||| |||||||| || |||||||| || ||||| |
Sbjct 838 TCTGTTGTGATGAGAGATTAGTTCTTCTCGGAGACGAAGTGTATCAGCAAAATATATACC 897
Query 1107 AGGATGAGCGTCCCTTTATCAGCTCCAAGAAGGTTTTGATGGAAATGGGTTCACCGTTCA 1166
| ||||| |||||||||||||| |||||||||||||||||||| ||||| ||||| |||
Sbjct 898 AAGATGAACGTCCCTTTATCAGTTCCAAGAAGGTTTTGATGGATATGGGAGCACCGATCA 957
Query 1167 GCAAGGGAGTTCAGCTTGTATCTTTTCACACAGTCTCTAAAGGATATTGGGGCGAATGTG 1226
|||||| ||||||||| ||||||| ||||| || || |||||||| |||||||||||||
Sbjct 958 GCAAGGAAGTTCAGCTCATATCTTTCCACACCGTTTCCAAAGGATACTGGGGCGAATGTG 1017
Query 1227 GACAGCGAGGTGGATACTTTGAGATGACCAACCTCCCTCCAAGGGTTGTTGAGGAGATAT 1286
| || || || || |||||||||||||| || ||||||| ||| |||||||||||||
Sbjct 1018 GGCAACGGGGAGGTTACTTTGAGATGACAAATATCCCTCCCAGGACCGTTGAGGAGATAT 1077
Query 1287 ACAAGGTTTCATCAATTGCCCTCAGCCCCAATGTCCCTGCCCAGATCTTTATGGGTTTGA 1346
||||||| | || || || ||||||||||| ||| |||| ||||| ||||||||||| |
Sbjct 1078 ACAAGGTGGCCTCTATAGCTCTCAGCCCCAACGTCTCTGCGCAGATATTTATGGGTTTAA 1137
Query 1347 TGGTTAGTCCTCCAAAGCCTGGAGACATTTCATATGACCAGTTCACCCGTGAAAGCAAGG 1406
||||||| || ||||||||||||||||||||||||||||| ||| ||||| |||||||
Sbjct 1138 TGGTTAGCCCACCAAAGCCTGGAGACATTTCATATGACCAATTCGTTCGTGAGAGCAAGG 1197
Query 1407 GGACT-CTTGAATCTTTGAGAAGAAGAGCAAGAATCATGACTGATGGATTCAACAGCTGC 1465
| | | || ||||| |||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1198 GAA-TACTAGAATCACTGAGAAGAAGAGCAAGGATGATGACTGATGGATTCAACAGCTGC 1256
Query 1466 AAAAACATCGTGTGCAATTTCACAGAAGGTGCAATGTATTCGTTTCCTCAAATACGGCTA 1525
|||||| |||| || ||||||||||||||||| |||||||| || ||||||||| | |
Sbjct 1257 AAAAACGTCGTCTGTAATTTCACAGAAGGTGCTATGTATTCATTCCCTCAAATAAAGTTG 1316
Query 1526 CCACCGGGAGCTATCCAAGCTGCAAAACAAGCCGGAAAAGTGCCAGACGTTTTCTACTGT 1585
|| || ||| |||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 1317 CCGTCGAAAGCAATCCAAGCAGCAAAACAAGCCGGAAAAGTCCCTGACGTTTTCTACTGC 1376
Query 1586 CTCAAGCTCTTAGAAGCCACAGGAATCTCCACAGTACCTGGCTCTGGGTTTGGACAGAAA 1645
|| |||||||||||||||||||||||||||||||| || |||||||| |||||||| |||
Sbjct 1377 CTTAAGCTCTTAGAAGCCACAGGAATCTCCACAGTTCCAGGCTCTGGATTTGGACAAAAA 1436
Query 1646 GAAGGTGTGTTCCATCTGAGGACAACGATCCTGCCAGCAGAAGAAGAGATGCCGGAAATC 1705
||||| ||||| ||| | |||||||| || ||||||||||||||||| ||||| || ||
Sbjct 1437 GAAGGGGTGTTTCATTTAAGGACAACAATTCTGCCAGCAGAAGAAGAAATGCCAGAGATT 1496
Query 1706 ATGGATAGTTTCAAGAAGTTCAACGACGAGTTCATGACTCAGTATGATAATAACGTTGGT 1765
||||| |||||||| |||||||| || ||||| ||| ||||||| | | ||||| |||||
Sbjct 1497 ATGGACAGTTTCAAAAAGTTCAATGATGAGTTTATGTCTCAGTACGCTGATAACTTTGGT 1556
Query 1766 TATTCGAGAATGTGA 1780
|| || |||||||||
Sbjct 1557 TACTCCAGAATGTGA 1571
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97991463840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5