BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472688 Length=1498 Score E Sequences producing significant alignments: (Bits) Value AT1G27150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 2305 0.0 > AT1G27150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:9429047-9432274 FORWARD LENGTH=1743 Length=1743 Score = 2305 bits (1248), Expect = 0.0 Identities = 1384/1451 (95%), Gaps = 3/1451 (0%) Strand=Plus/Plus Query 49 CCTGTAGGAAGCGGCTAACTTTCAGCTCTGTTTTCTTGAAAATGGAGAAAACACTGAGAT 108 ||||||||||||||| ||||| |||||||||| ||||| |||||||||||||| |||||| Sbjct 91 CCTGTAGGAAGCGGCAAACTTGCAGCTCTGTTCTCTTG-AAATGGAGAAAACAGTGAGAT 149 Query 109 GTGTTCGGTGGGGTTATGAGGTTAATACCTCTTCTGATGATTGCATCGACGCAATTAACT 168 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 150 GTGTTCGGTGGGGTTATGAGGTTAATACCTCTTCTGATGCTTGCATCGACGCAATTAACT 209 Query 169 CTTATTTTCAACAGGTTCTTAGTTATGGGAGGAAGAGGAAAGTGATTCTAGAAGCACCAC 228 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 CCTATTTTCAACAGGTTCTTAGTTATGGGAGGAAGAGGAAAGTGATTCTAGAAGCACCAC 269 Query 229 TCTACGATAATGATTGTGTTTTGGGCAACATTTTAGCTGCTCATTACCTTTCTTCATCTG 288 |||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 270 TCTACGATAAAGATTGTGTTTTGGGCAGCATTTTAGCTGCTCATTTCCTTTCTTCATCTG 329 Query 289 ATCCTTCCAGAGCTAATTCCTACGTTGAAGCTGCGGCCTCTAATCTCGAACAATCTACAC 348 ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 330 ATCCTTCTAGAGCTAATTCCTATGTTGAAGCTGCGGCATCTAATCTCGAACAATCTACAC 389 Query 349 CTTATGAGAAAGCGGTTTACGAGGCTGTTACTTACCTGATCTCCGAGGACAGGGATGACG 408 ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct 390 CTTATGAGAAAGCGGTTTACGAGGCTGTTACTTACCTAATCTCTGAGGATAGGGATGACG 449 Query 409 ACTTGGCTTTTGAAATGCACACCAAGCTACTTAATAGATTCCCAAAGGACCTT-GCCTCT 467 |||||||||||||||||||||||||||||||||| |||||||||||||| ||| || ||| Sbjct 450 ACTTGGCTTTTGAAATGCACACCAAGCTACTTAAAAGATTCCCAAAGGA-CTTGGCTTCT 508 Query 468 TTGAAGAGAGCACAGCTTTTATGTTTCTACATGGGTCAACCTGAGCCCTTTTTGGGTCTT 527 ||||| ||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||| Sbjct 509 TTGAAAAGAGCGCAGCTTTTAAGTTTCTACATGGGTCAACCTGATCCCTTCTTGGGTCTT 568 Query 528 GTTCAGCAGGTTCTACCTGCGAATCAAGAAGAAAGTTATATTCATGGTATACTTGCGTTC 587 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 569 GTTCAGCAGGTTCTACCTGCGAATCAAGAAGAAAGTTATATTCATGGTTTACTTGCGTTC 628 Query 588 CCATTGTTAGAACTTGGTCGAATGGAAGAAGCTGCGGCAGCTTCCAAAAAAGGCTATGAG 647 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 629 CCATTGTTAGAACTTGGTCGAATGGAAGAAGCTGCGGCAGCTTCCAGAAAAGGCTATGAG 688 Query 648 ATAAACAAAGAAGACTCCTGGGCACATCACTGTTTGTGTCATGTTCTTCAACATGAATGT 707 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 689 ATAAACAAAGAAGACGCTTGGGCACATCACTGTTTGTGTCATGTTCTTCAACATGAATGT 748 Query 708 CGGTTTAAAGAAGCAGTGGAGTTCATGGAAGCGCTCGCAGGATCTTGGCCTTCTTGCTCA 767 |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| Sbjct 749 CGGTTTAAAGAAGCAGTGGAGTTCATGGAAGCACTCGCAGGAACTTGGCCCTCTTGCTCA 808 Query 768 TCCTTCATGTATACACACAACTGGTGGCATGTTGCTCTTTGTTACTTAGAAGGAGGGTCA 827 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 809 TCCTTCATGTATACACACAATTGGTGGCATGTTGCTCTCTGTTACTTAGAAGGAGGGTCC 868 Query 828 CCAATGAGTAAAGTAGAGGAGATTTATGATCATCACATCTGGAAAGAATTGGAGAAAGAC 887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 869 CCAATGAGTAAAGTAGAGGAGATTTATGATCATCACATCTGGAAAGAATTGGAGAAAGAC 928 Query 888 GACGCTGTTCCTCCTGAAGTTTATCTCAATGCGCTGGGATTGTTGCTACGTTTAGATGTA 947 || ||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct 929 GATGCTGTTCCTCCTGAAGTTTATCTCAATGCATTGGGCTTGTTGATACGTTTAGATGTA 988 Query 948 AGAGATGCTCTTGATGGTTTTGAAGACCGTCTCAAAAACCTTGCAGTTCGTTTAACTAAT 1007 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 989 AGAGATGCTCTTGATGGTTTTGAAGACCGTCTCAAAAACCTTGCAGTTCGTTTAACTAAT 1048 Query 1008 CAGGCAAACTGGTATTTGGAGTGGCACCTTGATATATTGATAGTTTGGGCATTAGCAAAG 1067 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1049 CAGGCAAACTGGTATTTGGAGTGGCACCTTGATATATTGATAGTTTGGGCACTAGCAAAG 1108 Query 1068 GTTGGAGAGACTTCAAGAGCTCATGAATTACTTGAGGGTCTTAAGTCCCGATTATCAAGG 1127 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | Sbjct 1109 GTTGGAGAGACTTCAAGAGCTCATGAATTACTTGAGGGCCTTAAGTTCCGATTATCAAAG 1168 Query 1128 ATGAATaaaaaaaaaCAACAAGTGATGCAGAAAGGGATTCAGCTCGGGGAAGCTGTGTTT 1187 | ||| || || || ||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 1169 AAGAACAAGAAGAAGCAACAAGTGATGCAGAAAGGGATTCAGCTTGGGGAAGCTGTGTAT 1228 Query 1188 GAATTCGCAAGGGGTAACTACGAAAAGGCTTTAGAACTATTCGGTTCAGAGTTCAACGCC 1247 |||| ||||||||||||||||||||||||| |||||||| | |||||||||||||||||| Sbjct 1229 GAATACGCAAGGGGTAACTACGAAAAGGCTCTAGAACTACTGGGTTCAGAGTTCAACGCC 1288 Query 1248 ATTGGTTACAAGATCGTCGGGGCATCAGATGAACAGATAGATGTTTTCAACGAAATGTGG 1307 ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct 1289 ATTGGTTACAAGATCGTTGGGGCATCAGACGAACAAATAGATGTTTTCAACGAAATGTGG 1348 Query 1308 TGCCAGCTGCTGCTAAAGACAGGCCAATCCTCCACTGCCAAAGAAGTGATCAGAGAGAGG 1367 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 1349 TGCCAGCTGCTGCTAAAGACAGGCCAATCCTCCACGGCCAAAGAAGTAATCAGAGAGAGG 1408 Query 1368 ATAAAGATCAGAGATGGTGTTCCTTTCATGTGGCGTTTGCTGGAGAAGAGTTACTCCATG 1427 || ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 1409 ATTAAGGCCAGAGATGGTATTCCTTTCATGTGGCGTTTGCTGGAGAAAAGTTACTCCATG 1468 Query 1428 GAAGGCAATGCAGAGGCTGAGAGTAGTGCAGGAGAGAGAGCTAAGAAACTAGAATCTTGT 1487 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 1469 GAAGGCAATGCAGAGGCTGAGAGTAGTGCACGAGAGAGAGCTAAGAAACTTGAATCTTGT 1528 Query 1488 TATTTCTAACT 1498 ||||||||||| Sbjct 1529 TATTTCTAACT 1539 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73895202240 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5