BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472794 Length=1100 Score E Sequences producing significant alignments: (Bits) Value AT1G26218.1 | Symbols: | other RNA | chr1:9071058-9072273 REVE... 1230 0.0 AT1G26220.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) sup... 1107 0.0 > AT1G26218.1 | Symbols: | other RNA | chr1:9071058-9072273 REVERSE LENGTH=1135 Length=1135 Score = 1230 bits (666), Expect = 0.0 Identities = 739/775 (95%), Gaps = 1/775 (0%) Strand=Plus/Minus Query 1 TTTATCCAGATTCAGGGAAACTAAAAAACCATCCTTTTGTCTGATTCCATGAAATTGAGC 60 |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 1135 TTTATCCAAATTCAGGGAAACTAAAAAACCATCCTTTTGTCTGATTCCATGTAATCGAGC 1076 Query 61 TCCTAAAATTCGACACTTTAACAAGAAATAGTGTATACCATGCTTCTCGGAGGCACAATC 120 ||||||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1075 TCCTAAAATTCAACACTTGAACAAAAAATAGTGTATACCATGTTTCTCGGAGGCACAATC 1016 Query 121 TCCACTCCTCCAGCTTCTATCCGGTTAAGGTCCACATTAAACCCGCAAAACGCAGTCACA 180 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 1015 TCCACTCCTCCAGCTTCTCTCCGGTTAAGGTCCACATTAAACCCACAAAACGCAGTCACA 956 Query 181 CAATCATCATCACAAGCTACGTTTCCAGCTGCAACGCAACGAAAGCCACCAAGCTACTCA 240 ||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct 955 CAATCATCATCACAAGCGACGTTTCCAGCTGCAATGCAACGAAAGCCACCAAGTTACTCA 896 Query 241 ATCAGCGACGAAGATCTCGAATCCAGAGGCTTTCTTCTCCGTAGAACAGCAGAAGGACTT 300 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 895 ATCAGCGACGAAGATCTCGAATCCAGAGGCTTTCTTCTCCGTCGAACAACAGAAGGACTT 836 Query 301 AACTTAGATCAGCTGAATTCAGTCTTTGTAGCCGTGGGATTCCCACGTCGTGACACGGCG 360 |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 835 AACTTAGACCAGCTGAATTCAGTCTTTGCAGCCGTGGGATTCCCTCGTCGTGACACGGCG 776 Query 361 AAGATCGAGGTGGCGTTGCAGCACACAGACGCGTTGCTTTGGGTGGAGTACGAGAAAACG 420 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 775 AAAATCGAGGTGGCGTTGCAGCACACAGACGCGTTGCTTTGGGTAGAGTACGAGAAAACG 716 Query 421 CGGCGGCCTGTGGCGTTTGCGAGAGCGACCGGTGACGGAGTATTCAATGCGATCATATGG 480 ||| ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 715 CGGAGGCCTGTAGCGTTTGCGAGAGCAACCGGTGACGGAGTTTTCAATGCGATCATATGG 656 Query 481 GATGTGGTGGTTGATCCGTCGTTTCAAAGCTGTGGACTTGGGAAGGCGGTGATGGAGCGG 540 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 655 GATGTTGTGGTTGATCCATCGTTTCAAAGCTGTGGACTTGGGAAGGCGGTGATGGAGCGG 596 Query 541 TTGATTGAGGATTTGCAGGTGAAAGGGATCTGTAACATCGCTCTGTATTCGGAGCCTCGA 600 |||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct 595 TTGATTGAGGATTTACAGGTGAAAGGGATTTGTAACATTGCTCTGTATTCAGAGCCTCGA 536 Query 601 GTTCTCGGGTTTTATCGCCCGCTTGGGTTTGTCTCTGACCCGGATGGGATCAAAGGAATG 660 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 535 GTTCTCGGGTTTTATCGCCCGCTTGGGTTCGTCTCTGACCCGGATGGGATCAAAGGAATG 476 Query 661 GTTTTTATACGCAAACAGAGAAACAAGAAATGAAAAGTTCCAAACTTTTATAAATTTTAA 720 ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| Sbjct 475 GTTTTTATACGCAAACAGAGAAACAAGAAATAAAAAGTTTGAAACTTT-ATAAATTTTAA 417 Query 721 TTTCGTAAATTCACAGATTACAATGTCTCTTTAACTACACTTTGTTGTACAAGCT 775 |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 416 TTTCGTAAATGCACAGATTACAATGTCTCTTTAACTACACTTTCTTGTACAAGCT 362 Score = 501 bits (271), Expect = 6e-141 Identities = 314/333 (94%), Gaps = 9/333 (3%) Strand=Plus/Minus Query 775 TCCTTCCATGTTCAGTTCTCTGTTTTGATTTTGATTTTGATGGTCAAGAAGAAGCGGCTT 834 |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| Sbjct 331 TCCTTCCATGTTCAATTCTCTGTTTTGGTTTTGATTTTGATGGTCAAGAAGAAGCTGCTT 272 Query 835 TGGCATGGTGGAAGAAGGCAACGGAACAGAGGATGGAAGCGATGAGAGCGAAGAACCCTA 894 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 271 TGGCATGGTGGAAGAAGGCGACGGAGCAGAGGATGGAAGCGATGAGAGCGAAGAACCCTA 212 Query 895 ATCCGACCATCAGAGAGATTCCGGCGACGATCAGATCCATTAGCATCATCAGCACCATCT 954 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 211 ATCCGACCATCAGAGAGATTCCGGCGACGATCAGATCCATTAGCGTCATCAGCACCATCT 152 Query 955 TAGCTTTCTTCGATCTCTTC-TT-T-----AGCTACGGTAAGATTTAGTGTTTTGGGGAT 1007 |||||||||||||||||||| || | ||||| |||||||||||||||||||||||| Sbjct 151 TAGCTTTCTTCGATCTCTTCGTTGTTTCTCAGCTATGGTAAGATTTAGTGTTTTGGGGAT 92 Query 1008 AATTCAAACAAATGATTCGAAGAAGAAGTTAAGCCTCGCATTGACACGTTTATGAGATGA 1067 |||| | ||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 91 AATTTA--CAAATGATTCGAAGAAGAAGTGAAGCCACGCATTGACACGTTTATGAGATGA 34 Query 1068 CCAGAGCTTATGACATTTAGCGCAATTTCAGAG 1100 ||||||||||||||||||||||||||||||||| Sbjct 33 CCAGAGCTTATGACATTTAGCGCAATTTCAGAG 1 > AT1G26220.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr1:9071140-9071861 FORWARD LENGTH=722 Length=722 Score = 1107 bits (599), Expect = 0.0 Identities = 660/690 (96%), Gaps = 1/690 (0%) Strand=Plus/Plus Query 86 AAATAGTGTATACCATGCTTCTCGGAGGCACAATCTCCACTCCTCCAGCTTCTATCCGGT 145 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 4 AAATAGTGTATACCATGTTTCTCGGAGGCACAATCTCCACTCCTCCAGCTTCTCTCCGGT 63 Query 146 TAAGGTCCACATTAAACCCGCAAAACGCAGTCACACAATCATCATCACAAGCTACGTTTC 205 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 64 TAAGGTCCACATTAAACCCACAAAACGCAGTCACACAATCATCATCACAAGCGACGTTTC 123 Query 206 CAGCTGCAACGCAACGAAAGCCACCAAGCTACTCAATCAGCGACGAAGATCTCGAATCCA 265 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 124 CAGCTGCAATGCAACGAAAGCCACCAAGTTACTCAATCAGCGACGAAGATCTCGAATCCA 183 Query 266 GAGGCTTTCTTCTCCGTAGAACAGCAGAAGGACTTAACTTAGATCAGCTGAATTCAGTCT 325 ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct 184 GAGGCTTTCTTCTCCGTCGAACAACAGAAGGACTTAACTTAGACCAGCTGAATTCAGTCT 243 Query 326 TTGTAGCCGTGGGATTCCCACGTCGTGACACGGCGAAGATCGAGGTGGCGTTGCAGCACA 385 ||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 244 TTGCAGCCGTGGGATTCCCTCGTCGTGACACGGCGAAAATCGAGGTGGCGTTGCAGCACA 303 Query 386 CAGACGCGTTGCTTTGGGTGGAGTACGAGAAAACGCGGCGGCCTGTGGCGTTTGCGAGAG 445 ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| Sbjct 304 CAGACGCGTTGCTTTGGGTAGAGTACGAGAAAACGCGGAGGCCTGTAGCGTTTGCGAGAG 363 Query 446 CGACCGGTGACGGAGTATTCAATGCGATCATATGGGATGTGGTGGTTGATCCGTCGTTTC 505 | |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 364 CAACCGGTGACGGAGTTTTCAATGCGATCATATGGGATGTTGTGGTTGATCCATCGTTTC 423 Query 506 AAAGCTGTGGACTTGGGAAGGCGGTGATGGAGCGGTTGATTGAGGATTTGCAGGTGAAAG 565 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 424 AAAGCTGTGGACTTGGGAAGGCGGTGATGGAGCGGTTGATTGAGGATTTACAGGTGAAAG 483 Query 566 GGATCTGTAACATCGCTCTGTATTCGGAGCCTCGAGTTCTCGGGTTTTATCGCCCGCTTG 625 |||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 484 GGATTTGTAACATTGCTCTGTATTCAGAGCCTCGAGTTCTCGGGTTTTATCGCCCGCTTG 543 Query 626 GGTTTGTCTCTGACCCGGATGGGATCAAAGGAATGGTTTTTATACGCAAACAGAGAAACA 685 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 544 GGTTCGTCTCTGACCCGGATGGGATCAAAGGAATGGTTTTTATACGCAAACAGAGAAACA 603 Query 686 AGAAATGAAAAGTTCCAAACTTTTATAAATTTTAATTTCGTAAATTCACAGATTACAATG 745 |||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 604 AGAAATAAAAAGTTTGAAACTTT-ATAAATTTTAATTTCGTAAATGCACAGATTACAATG 662 Query 746 TCTCTTTAACTACACTTTGTTGTACAAGCT 775 |||||||||||||||||| ||||||||||| Sbjct 663 TCTCTTTAACTACACTTTCTTGTACAAGCT 692 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53915385330 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5